Basic Information

Insect: Triatoma infestans
Gene Symbol: ZNF236
Assembly: GCA_011037195.1
Location: JAAEAF010001617.1:9475-18440[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 6.2e-06 0.0024 20.2 0.2 3 23 145 165 144 165 0.97

2 10 1.3 5.2e+02 3.4 0.3 3 23 173 193 171 193 0.88

3 10 3.4 1.3e+03 2.1 4.2 1 19 207 225 207 230 0.88

4 10 0.00011 0.044 16.2 2.8 1 23 246 268 246 268 0.96

5 10 6.2e-07 0.00024 23.3 0.6 1 23 274 296 274 296 0.98

6 10 2.4e-06 0.00093 21.5 2.8 1 23 302 325 302 325 0.96

7 10 0.02 7.8 9.1 5.6 1 23 335 358 335 358 0.97

8 10 7.8e-06 0.003 19.9 0.5 2 23 434 455 433 455 0.98

9 10 1.2e-06 0.00046 22.5 0.6 1 23 461 483 461 483 0.99

10 10 0.056 22 7.7 0.1 1 15 489 503 489 505 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	6.2e-06	0.0024	20.2	0.2	3	23	145	165	144	165	0.97
2	10	1.3	5.2e+02	3.4	0.3	3	23	173	193	171	193	0.88
3	10	3.4	1.3e+03	2.1	4.2	1	19	207	225	207	230	0.88
4	10	0.00011	0.044	16.2	2.8	1	23	246	268	246	268	0.96
5	10	6.2e-07	0.00024	23.3	0.6	1	23	274	296	274	296	0.98
6	10	2.4e-06	0.00093	21.5	2.8	1	23	302	325	302	325	0.96
7	10	0.02	7.8	9.1	5.6	1	23	335	358	335	358	0.97
8	10	7.8e-06	0.003	19.9	0.5	2	23	434	455	433	455	0.98
9	10	1.2e-06	0.00046	22.5	0.6	1	23	461	483	461	483	0.99
10	10	0.056	22	7.7	0.1	1	15	489	503	489	505	0.90

Sequence Information

Coding Sequence: ATGAAAATATTGCGCATACGAATGAGGGACGGCATCTACAATACATTCAGATGCGACAGACAGATAGAGAGCGTGACTCGAGATGATTTTGAAGATGGAATGATAGTTACAAACTTGGCATTTCTGAAGAGTATTCCAAACTCAGTGCAATATTGGTCCAATAGAAAGGACTTGTCCGCCATGATTCGACAGCTCGATAATTCCACTGCCATTCTCACCATGAGTGAAAATAAGATCATATTGAACAAGTGGTCGCAGAAGTTCGTGTCGTTTGGTCCGCTCGACGAGGGCGATATAATGGAACGACTGAAGCGCATTAGGCCAACGAGGATCCAGTCATCTGATGTATCTCCTAAAGAAGATAATAAATCAGAGATattatccttgaATCTCTCATTGCATGTTGCTACACATGAAGTTGATAATCCATTTTGCCCAGTTTGCAAAAAGAGATTTAACCGAGCAGCTGGACTGAAAGCTCATATTATGTTAcatgaaaaagaagaaagtttatTTTGCCCAGAATGCGGTGATGAATTCACTTGTCAAatGTTATTGGATGTACATCTGGAAGAGCACAAAGTAGAATAttctaaagtgccattaaaGAAGAAACAGTATAATTGCTTGCAATGTCAAGAAAAGTTTCTTACAAGCACATCATTAAAAGAGCATTGTAAACTTTTCCATaagCTTTTACCAACTAAGAAAATCAAACGTAGAAGGAAAAAAGCTTACGTTtgttcattttgtcaaaaagcCTTTGATAAACCCAGCCAGTTGTCCAGGCATTGTAGAATTCATACTGGTGAGCGGCCGTTTAAGTGTGAAGTGTGCTCTCGTGCTTTCAATCAGAAAGGCTCACTGCAAATACATATGTTGAAACATACAGGTGTCAAACCGTATGAATGTAAACATTGTCACGCTGCTTTCAGTCAAAAAGgaaacttgcaagcacatatatttaaattgcaCACAGTATCTGCTGCTGATGGTAGAGTACATAAATGCCCTCATTGCACTTGTATATTTGGTAAAGGTAGAAGTCTTCGGGCTCATATGACAAAATTGCACGGAATTTATGCGAAGCAAGAAGTAAACAATTCTGTAtaTGATACCGGTAAAGAACCTGTCAAAGAGGATTCCCAGCTGCAAGATAATGACACATCAAATAAAGaaaatgaaagaaaaaaatcagaagtgaaaaaaaaattagtatcaAATGATAATGTGGAAACGGTTATTACGGGCCAGAAAGAAATGATCCAACAAGAAGATGCAAATACTTCAAAATGGCAACAATGTACTTACTGTTTGAAGGAATTCACTAAACCAAAAGAATTGATAAGTCACATTAGGATACATGCAATTGAGAAGCCGTATAAGTGTAAATTATGTTCAAAGGGTTTCTCCGTAAGTTCATCCCTGGCAATTCATTTGAGAAGCCATACTGGTTTGAAATGTTATGTGTGCAATATCTGTGATAAGTTATATGCTACGaGGTCATCCAATCAACTCCCAGATGCTTTGTCCAGAATGGACAACTCTGAAGACAACCCTTGCGCTATCATTCCAGATGATTTTCAGACCAGCGATAACTGGTATAAGAAAAAGACCAAAAGTAATTCCCAGGAGCAACAGAAAATAGTCCTTTCAGAAAACCATGATCGACCAGAAGCAGGAGACCTTGGGATTTCCAGAACTTACGCTCGATCAGTGCACGTTACTTTTGGCCAGGAATGTTTAGAACTGTCGTACACTACTACGCCACTATCGCATCTGCCAGTTCAACAAGAATAG
Protein Sequence: MKILRIRMRDGIYNTFRCDRQIESVTRDDFEDGMIVTNLAFLKSIPNSVQYWSNRKDLSAMIRQLDNSTAILTMSENKIILNKWSQKFVSFGPLDEGDIMERLKRIRPTRIQSSDVSPKEDNKSEILSLNLSLHVATHEVDNPFCPVCKKRFNRAAGLKAHIMLHEKEESLFCPECGDEFTCQMLLDVHLEEHKVEYSKVPLKKKQYNCLQCQEKFLTSTSLKEHCKLFHKLLPTKKIKRRRKKAYVCSFCQKAFDKPSQLSRHCRIHTGERPFKCEVCSRAFNQKGSLQIHMLKHTGVKPYECKHCHAAFSQKGNLQAHIFKLHTVSAADGRVHKCPHCTCIFGKGRSLRAHMTKLHGIYAKQEVNNSVYDTGKEPVKEDSQLQDNDTSNKENERKKSEVKKKLVSNDNVETVITGQKEMIQQEDANTSKWQQCTYCLKEFTKPKELISHIRIHAIEKPYKCKLCSKGFSVSSSLAIHLRSHTGLKCYVCNICDKLYATRSSNQLPDALSRMDNSEDNPCAIIPDDFQTSDNWYKKKTKSNSQEQQKIVLSENHDRPEAGDLGISRTYARSVHVTFGQECLELSYTTTPLSHLPVQQE*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -