Basic Information

Insect: Triatoma infestans
Gene Symbol: ham_1
Assembly: GCA_011037195.1
Location: JAAEAF010006529.1:15580-24674[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.075 29 7.3 0.0 2 23 28 50 28 50 0.93

2 9 0.065 25 7.5 2.3 1 23 57 80 57 80 0.95

3 9 4.3e-09 1.7e-06 30.1 1.2 1 23 86 108 86 109 0.96

4 9 3.9e-06 0.0015 20.8 2.5 1 23 115 137 115 137 0.95

5 9 1.8e-05 0.0068 18.8 5.0 1 23 143 165 143 165 0.99

6 9 0.00044 0.17 14.4 0.7 2 21 173 192 172 193 0.95

7 9 6e-09 2.3e-06 29.7 0.7 1 23 534 556 534 556 0.98

8 9 2.2e-07 8.4e-05 24.8 1.7 1 23 562 585 562 585 0.97

9 9 1.8e-06 0.00069 21.9 3.4 1 23 591 613 591 613 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.075	29	7.3	0.0	2	23	28	50	28	50	0.93
2	9	0.065	25	7.5	2.3	1	23	57	80	57	80	0.95
3	9	4.3e-09	1.7e-06	30.1	1.2	1	23	86	108	86	109	0.96
4	9	3.9e-06	0.0015	20.8	2.5	1	23	115	137	115	137	0.95
5	9	1.8e-05	0.0068	18.8	5.0	1	23	143	165	143	165	0.99
6	9	0.00044	0.17	14.4	0.7	2	21	173	192	172	193	0.95
7	9	6e-09	2.3e-06	29.7	0.7	1	23	534	556	534	556	0.98
8	9	2.2e-07	8.4e-05	24.8	1.7	1	23	562	585	562	585	0.97
9	9	1.8e-06	0.00069	21.9	3.4	1	23	591	613	591	613	0.99

Sequence Information

Coding Sequence: ATGCCAACAAAAAGTGATTTAGGATCACATCAGTCGAGTACTGGTGAAGAGGACAGAGACGACGATGAAGAAGATCTGGCCAGATGTCCTGTCTGTGACAGCCCATTTCCAGACGTTGACCTATTGGATGATCATTTAGTGTCCAGCCATAGATACGTCGGTGGACAATATCGTTGTGATAAATGTACCAGATCGTATAGCTGGCGACCCTGTTTAGTACAACATCAAGCCTCCAGACACGGACAAATTAGGCGATATCCTTGTGAAAATTGTACGAAAGTATTTTCTGACCCAAGCAATCTACAAAGGCATATCAgATCGCATCACGTTGGAGCCAGATCGCATGCATGCCAGGAATGTGGTAAAACTTTTGCAACATCTTCTGGACTAAAACAGCACACTCATATACATTCTAGCATCAAACCGTTTCAGTGTGAAGTTTGCTTTAAGGCGTACACGCAGTTCAGCAATCTGTGTCGCCACAAGCGGATGCACGCCGATTGCCGGATGCAGATCAAATGCGGAAAGTGCGGCCAGACGTTCAGTACTGGTACATCGCTATCAAAACATAAACGATTCTGCGACTCCACTTCACCAGTGACCAGTCCGCCGACAATGAATCATATTCCCCAGCCGGCGGCAAACCCATTTCTTTTGTATCCTAGGGCACATGGTGCGCTTCCATTCTATCCTCCAGCTATACTCCCACCTTATCCGTCCATTTTCCCGCCAACTGGTCCCACTCCCGGCTTCCTGACCAATCCATTATTGTTTTCACATAAAGATgatgaaatgaaatttaactCGAGGCTTACAATGGAAGCGTACCATAATTTTGCTCGACAGAATTCACAAGATAGTTCACCATCGCCGACTAGAAGTGGTGGCAATTTATCACCGGCTGCTGATTCTACACCCACGATGAATTCAATACTGAGTTTAACCAAAGTTTCACCACCAACGGCTGAAGAAGCGGCTTCAAATGAACGACCATCGCCCGCTAGGCCACCAATGTCAGCTTCTTTTCCCAAAGAAGAACACGCTGAAGATCTGACTGTTACTGATGAGAGAGCCGAATCACCTGTATCTTCAAAAGCTAGTGGGGAAAAATTTAACGATCAACCATTAGATCTAAGGGTTTGCGGCAAACGAGCAAGATCTGAAACACCGCCCTCGGTGAAAAGCGAAAGAGTCACGCCATCGCCAAAAAAGactgaaattgaaaaatcaccggAAACAATGAGTACAAGACAATCGGACACAATTGTAGACACGCCAACAGGAATACCTGTGGACAGCAGAGGTGGTGGGGCCGTAGACAACGGTGAAAAGACAACACCTCCGGCTATGGCCTATCCACGACCTATACACCCGATGTTCTTGGAAGCACTGTATCGTCCACCGTTTCCACCATTTCAACAACGAGAACCCCAAGACCGAGTGTTTGGTGGCCAGTTCGGACCGGCCCGGCCATTTCCATTTATAAGCAGTCAGAGATACGATCTGAGAGCACCATTTccgccaaatggtaaaccattTCACGAAGCGCTACAGAACAGTGCCGCTCAACCACAGCCTGGTGGACGTACAAAAGATCGTTATGCTTGTAAATTTTGTGGTAAAGTATTTCCTAGGTCGGCGAATTTAACTAGACATTTACGAACGCACACTGGTGAACAACCATACAAATGCAAATATTGTGAACGTTCTTTCAGTATATCGTCGAATTTACAAAGACATGTtagaaatatacataataagGAGAAACCATTTAAATGCCCTTTGTGTGATAGATGTTTTGGTCAACAAACCAATTTAGATAGACATTTAAAGAAACATGAAGCGGACGATGGCAGTGGTAATGGTACGGTGGCTGACTCACCAAGCAGTGGTGAGAATGAGCGAGAAGATACATATTTCGATGAGATCAGATCGTTTATGGGCAAGGTAACTTATGGTGGACAGTATACACCGCCAAACATACAAACGCCCAAAGACGAAGAGTCTATAGAATCGACAAGTGAAGAAGAATCGCCAAGACAATTGTCACCATATCAGGAAAGTCCAATCGCCATGGTGATCGGCAAACAACTGTCTACATATATTAAAGAAGAACAATCGTTGAATAACAATTCGGCCGATACAGAACCGTTACAGATCTCAACCTAG
Protein Sequence: MPTKSDLGSHQSSTGEEDRDDDEEDLARCPVCDSPFPDVDLLDDHLVSSHRYVGGQYRCDKCTRSYSWRPCLVQHQASRHGQIRRYPCENCTKVFSDPSNLQRHIRSHHVGARSHACQECGKTFATSSGLKQHTHIHSSIKPFQCEVCFKAYTQFSNLCRHKRMHADCRMQIKCGKCGQTFSTGTSLSKHKRFCDSTSPVTSPPTMNHIPQPAANPFLLYPRAHGALPFYPPAILPPYPSIFPPTGPTPGFLTNPLLFSHKDDEMKFNSRLTMEAYHNFARQNSQDSSPSPTRSGGNLSPAADSTPTMNSILSLTKVSPPTAEEAASNERPSPARPPMSASFPKEEHAEDLTVTDERAESPVSSKASGEKFNDQPLDLRVCGKRARSETPPSVKSERVTPSPKKTEIEKSPETMSTRQSDTIVDTPTGIPVDSRGGGAVDNGEKTTPPAMAYPRPIHPMFLEALYRPPFPPFQQREPQDRVFGGQFGPARPFPFISSQRYDLRAPFPPNGKPFHEALQNSAAQPQPGGRTKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKHEADDGSGNGTVADSPSSGENEREDTYFDEIRSFMGKVTYGGQYTPPNIQTPKDEESIESTSEEESPRQLSPYQESPIAMVIGKQLSTYIKEEQSLNNNSADTEPLQIST*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01301794;
90% Identity: iTF_01479617; iTF_01301794;
80% Identity: -