Basic Information

Insect: Triatoma infestans
Gene Symbol: Rreb1
Assembly: GCA_011037195.1
Location: JAAEAF010003567.1:59603-71813[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.088 34 7.1 0.2 1 23 300 322 300 322 0.92

2 12 1.5e-05 0.0059 19.0 1.6 1 23 330 352 330 352 0.99

3 12 0.00013 0.049 16.1 0.4 1 23 359 381 359 381 0.97

4 12 2.4e-06 0.00092 21.5 0.7 1 23 387 409 387 409 0.99

5 12 1e-06 0.0004 22.6 1.8 1 23 416 438 416 438 0.99

6 12 0.00012 0.047 16.1 1.1 1 19 444 462 444 466 0.93

7 12 1.4e-05 0.0055 19.1 0.2 1 23 472 494 472 494 0.98

8 12 3.8e-06 0.0015 20.9 0.8 1 23 500 523 500 523 0.96

9 12 8.1e-06 0.0031 19.8 0.3 1 23 529 552 529 552 0.96

10 12 1.7e-05 0.0067 18.8 3.0 1 23 558 580 558 580 0.99

11 12 6.3e-06 0.0025 20.2 0.5 1 23 586 608 586 608 0.97

12 12 0.00076 0.29 13.6 0.1 1 21 614 634 614 638 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.088	34	7.1	0.2	1	23	300	322	300	322	0.92
2	12	1.5e-05	0.0059	19.0	1.6	1	23	330	352	330	352	0.99
3	12	0.00013	0.049	16.1	0.4	1	23	359	381	359	381	0.97
4	12	2.4e-06	0.00092	21.5	0.7	1	23	387	409	387	409	0.99
5	12	1e-06	0.0004	22.6	1.8	1	23	416	438	416	438	0.99
6	12	0.00012	0.047	16.1	1.1	1	19	444	462	444	466	0.93
7	12	1.4e-05	0.0055	19.1	0.2	1	23	472	494	472	494	0.98
8	12	3.8e-06	0.0015	20.9	0.8	1	23	500	523	500	523	0.96
9	12	8.1e-06	0.0031	19.8	0.3	1	23	529	552	529	552	0.96
10	12	1.7e-05	0.0067	18.8	3.0	1	23	558	580	558	580	0.99
11	12	6.3e-06	0.0025	20.2	0.5	1	23	586	608	586	608	0.97
12	12	0.00076	0.29	13.6	0.1	1	21	614	634	614	638	0.92

Sequence Information

Coding Sequence: ATGACGGCAGATTCGCTGACAGAAAAAGGGAGCATTGTGTGTTTAATATGCAATGCAAGTGTTGGCGTTTCCACAAGGAACAGTTGTCCAatttttcaatacaatgtaaCCTCCTCTGAACAGCCTGTTGCCAATATTCTTAGTGTTATACTAGGGCAAGAAGTGAGAAAAGAGTTAGTTCATAGtgaaattatatgtaaaaaatgttacaagCTATGTAACGAAGTAGACGAATTGCAAGAGCGTCTTACAGAGATCAAAATGGAACTGAACAACTATTATCAGAGAACCCTCAgaaaaatggaGGGAGGTCAAGATGAAGATTTAGATACTTCTTCATCACGTGTGTTTATAATTCCTAAGGCGCATGGTACTAGGAGACCCGGACGTCCCCGAAAAAATCCTgaaccaatattgacaaaaGAAGATTCAAAATATCCGGAAGAAAATGGGGCTCTCGAAATGGAGGAGACGATAGTGGAAGATGATGAAGATGAAGATGAGGATGACAGAGGGATAGGTATGGATGATGAGAATGATCTTGATTACGTACCTAATCCATCTTCTTTAGGAGTTAAAAGAAGTGGAGAAAACCTTAGAAAAGTACAACAAGCATTATTAGCCGCTTCCGGTCAATCAGCTGGTGATGTTCAGATTAAACTTGAAGTGATTGATGAAGGAGATGATGGCGACCAAATACTTGACAGAGATGGCTTACCAAAGAAGAAATCTCTTACTAAGAAGAAAGAACCTGATGTGCCAAATATTATTCCTAGAATGATAGTAAGTCGAAATGGAAAGGTATACACATGTTTATTATGTTCGGCTGAAGAGAAGGTGCAAGGCGATGCAAAAGCCATTATTACACACATGAGAGAAACACATAACATTCGTCTCTATATATGCGACATGTGTGGTATGGAATTCTTGAAAAGGACTGAATTATCAGCACACTTTGATCAACATGTTGCCACTGAGGAAGGTGATTTCCAGTGTGATGTTTGTAATCGTGTTTTTAACAATCTTCGTCTGTTCAGAGTACATAAAAGGATGCATCAACCACAACCTAAGAATCATATTTGTGAAATATGTGGCAAGGGTTTCTTATCTCGAAATACATTAGAAGAACATATGAATGTGCATACAGGTACTCGACCATATAAATGCAATGATTGTGGCAAAGACTTTGCATCTAAATATTCAGCCCGAGCTCATGAAAAAACTCATACAGAACGGCCGAGACCATATAAGTGTTCGCAGTGCAATAAGTCATTTATTACTGAACAAAATCTCTTACAGCATGAAAGAACTCATGTTGCTGTTAGGAGTTATTCATGTCAAGTTTgtggAAAATCTTTTAGTTCAGGCCGAAATTTGGAAGTACATTGCGTAGTACATACTGGATATAAGCCATTTATTTGTAGAATGTGTGGAAAAGCATTTGCTAGGAAGGCTGAAATTAGAGACCATGAGAGAACTCATACCGGTGAAAAGCCTTATCAATGTGAATTTTGTGGAGCCACGTTTGGTCAAAGAAGTAATTTGCAATCACATAAGAGAGCAACACATTACGATGATAAGAGATATCAATGTGTTGAATGTGGTAAAGCTTTTAAAAGGCGGCGACTACTCGATTATCATATTAAAGCGGCACATACTGGTGAAAGACCTTATAAATGTCAAATTTGTAGTGCTACATTCATTTATCCCGAACATTTTAAGAAACATAGAAGAATACATACTGGTGAAAAACCCTATCAATGTGAAgtATGTGGCAAAGCCTTCAATAGCCGAGATAATCGTAATGCTCATAGATTTGTACATAGTGATAAGAAGCCTTACGAATGTTTAGTTTGTGGCGTTGGTTTTATGCGCAAACCGCAGCTGTACAATCACATGCAAGCGCGGgGTCACGTTAATGATACGATAGTAGTTAATCAGCCACGGTTGACTACGGATGAAGATCTACTTGCTCAGCAAGCAGAAGAAGCACAACTGGCCGCTGCAATGAGTGAGCAACCCAAATGGCAAAATGATGAGgACCAAGAGACTGAGActaaagtttatattagtgaaTTAAAAGAACACGTAATTATACAACCTAGTAAGAATGAGGAAGTGGGAGAAGAAGGCCATTATACGGAAGAAGTTGGGCATCTTATTATCGATGGACCggTTCATTTTGCTGATGGAGATACTTTAGAATTAGCTACGGCTGATGGCACTGCAACATTAGCGGAAGGTATGGAAGGCGCACATCATTTAGTTGTACCAGCTGGGGCTACTGTAAGAACATCACAACCAGGTACAGAGTACACTGTTGAAGCGGGTGATGGTACTACAATGCAGACTGCAAATGGGCAGGTACATCTTGTTCAGATAACACTACCTGAATCATCGGAACCTCATACAGCATGGTTCAATATTGTGGAACAGTAA
Protein Sequence: MTADSLTEKGSIVCLICNASVGVSTRNSCPIFQYNVTSSEQPVANILSVILGQEVRKELVHSEIICKKCYKLCNEVDELQERLTEIKMELNNYYQRTLRKMEGGQDEDLDTSSSRVFIIPKAHGTRRPGRPRKNPEPILTKEDSKYPEENGALEMEETIVEDDEDEDEDDRGIGMDDENDLDYVPNPSSLGVKRSGENLRKVQQALLAASGQSAGDVQIKLEVIDEGDDGDQILDRDGLPKKKSLTKKKEPDVPNIIPRMIVSRNGKVYTCLLCSAEEKVQGDAKAIITHMRETHNIRLYICDMCGMEFLKRTELSAHFDQHVATEEGDFQCDVCNRVFNNLRLFRVHKRMHQPQPKNHICEICGKGFLSRNTLEEHMNVHTGTRPYKCNDCGKDFASKYSARAHEKTHTERPRPYKCSQCNKSFITEQNLLQHERTHVAVRSYSCQVCGKSFSSGRNLEVHCVVHTGYKPFICRMCGKAFARKAEIRDHERTHTGEKPYQCEFCGATFGQRSNLQSHKRATHYDDKRYQCVECGKAFKRRRLLDYHIKAAHTGERPYKCQICSATFIYPEHFKKHRRIHTGEKPYQCEVCGKAFNSRDNRNAHRFVHSDKKPYECLVCGVGFMRKPQLYNHMQARGHVNDTIVVNQPRLTTDEDLLAQQAEEAQLAAAMSEQPKWQNDEDQETETKVYISELKEHVIIQPSKNEEVGEEGHYTEEVGHLIIDGPVHFADGDTLELATADGTATLAEGMEGAHHLVVPAGATVRTSQPGTEYTVEAGDGTTMQTANGQVHLVQITLPESSEPHTAWFNIVEQ*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01479609;
90% Identity: iTF_01479609;
80% Identity: -