Basic Information

Insect: Triatoma infestans
Gene Symbol: -
Assembly: GCA_011037195.1
Location: JAAEAF010005120.1:146656-159693[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.16 63 6.3 1.2 1 20 174 193 174 195 0.94

2 13 2.1e-05 0.0081 18.5 0.4 2 23 264 286 263 286 0.96

3 13 0.00015 0.06 15.8 0.2 1 23 291 313 291 313 0.98

4 13 1.2e-06 0.00046 22.5 1.0 1 23 343 366 343 366 0.98

5 13 4.8e-05 0.019 17.4 0.3 1 23 371 393 371 393 0.98

6 13 9.9e-06 0.0038 19.6 0.9 1 19 399 417 399 420 0.95

7 13 1.6e-07 6.2e-05 25.2 0.3 1 23 431 453 431 453 0.97

8 13 2.1 8.1e+02 2.8 1.7 1 23 463 485 463 485 0.96

9 13 2e-06 0.00077 21.7 3.0 1 23 491 513 491 513 0.98

10 13 0.00069 0.27 13.8 1.7 1 23 519 541 519 541 0.95

11 13 8.8e-05 0.034 16.6 3.8 1 23 547 569 547 569 0.95

12 13 2.1e-05 0.0081 18.5 0.8 1 23 581 604 581 604 0.94

13 13 3.3e-07 0.00013 24.2 0.4 1 23 610 632 610 632 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.16	63	6.3	1.2	1	20	174	193	174	195	0.94
2	13	2.1e-05	0.0081	18.5	0.4	2	23	264	286	263	286	0.96
3	13	0.00015	0.06	15.8	0.2	1	23	291	313	291	313	0.98
4	13	1.2e-06	0.00046	22.5	1.0	1	23	343	366	343	366	0.98
5	13	4.8e-05	0.019	17.4	0.3	1	23	371	393	371	393	0.98
6	13	9.9e-06	0.0038	19.6	0.9	1	19	399	417	399	420	0.95
7	13	1.6e-07	6.2e-05	25.2	0.3	1	23	431	453	431	453	0.97
8	13	2.1	8.1e+02	2.8	1.7	1	23	463	485	463	485	0.96
9	13	2e-06	0.00077	21.7	3.0	1	23	491	513	491	513	0.98
10	13	0.00069	0.27	13.8	1.7	1	23	519	541	519	541	0.95
11	13	8.8e-05	0.034	16.6	3.8	1	23	547	569	547	569	0.95
12	13	2.1e-05	0.0081	18.5	0.8	1	23	581	604	581	604	0.94
13	13	3.3e-07	0.00013	24.2	0.4	1	23	610	632	610	632	0.96

Sequence Information

Coding Sequence: ATGATTGGACTCGGGATAAGGGCCTTTCAATCCATTCCAGGTTTGCGAAGACATGAATTCAGTTGCAATGTAACTTCTAACAAGAATAGAAAGTTGGAAAGAGGTCGTAATAGAAAAAAGGAAGTTATACCAATAGGAACCTGCCAAACATCAAACTCTCTTAAAGACACAACTGACGAAACCACAGTTAATGGCCAGACTAATCATTGCAACGAAAATCCAGTAATAAATGCCTGTCCATCATCTCTTATCGACAAAAATGCTGATGGaaacaaagaaaatgaaatttcagaGACATCCAATCAAACGTCAAACTTTACATTAAGTGTAGTATCTTGTAAAGCAGAAGCGAATGGTAATGTATCCGATGAAGTTGACAGTGCTGttacatacaaagatgtaaCTTATCCGAATCCGAACGCTATAAGCAGTCAATCAGATGATCATCATTCAGATGGTTTGGAAGTAGTTGATGACTTAATAGTTAAAGATGAAAGCAAAAATGATGAGGTAGCACAGCACAAGTGTATGTACTGCGCAAACGTTTATAAGACATTTAGGggTCTCCGAAGACATGAGAGTAATTGTAAGAAAAAACATCCTTTGAACAATAACACAGCTTTGACTGATGCTAGTACAGAAGCTGAAATAGCAGTACCCTCTGAACCAGTGGCCAACTCTTCAGATACTCCATATACAAATAgcaatgataatttaaatattgaaaatgaaaattcatgTCACTGCTGCGGGGAAGATAAAGAAAcagctcatataatagGCGACTTAGAATGTAAGGactgtttgaaacttttccgcTTGAAATCGTCACTAGAACGCCACATTCGAATAGTTCATAATGGAGAAAGTCATGAATGTCCACAGTGTGGAGCGAAAAGTCCTGACAAGGGTACTCTAGCCACACATATGTACACTCATACAGgcaatgataatttaaatagtGATGATGAAAATAAATGTCACTGCTGCGGAGAAGATAAAGAAAcagctcatataaTAGGCGACTTTGAATGTAAGGactgtttgaaatttttccgCTTGAAATCATCACTAGAACGCCACATTCGAGTAGTTCATAATGGAGAAAGTCATGAATGTCCACAGTGTGGAGCGAAAAGTCCTGACAAGGGTACTCTAGCCAGACATATGTACACTCATACAGGTCTGAAACCTTACTCCTGTCCTGTTTGCAATCAAGAATTCAGCAGGAAGTATCATCTAGTAAGGCATAATATGCAGACTGGATGTGATGGAAAAGAGAAACCAATTTTTCCATGCCAGGTTTGTGGAAGAGAATTCAATAGAAAGGATAATCTTAGGGAACACCTTCGAGCGCATGCAGGCCAAACTaaacgaaagaaaaaatatacttgtGGGTGTTGCGGTGTCGAATGTGAAGCTAATGAATTATTGAAGcttcataaaaaaattcataatgGCGAAAGGCAGTATGCATGTGACTTTTGCCATAAAAAATTCCCTTCAAGTGGAGCTCTGAAGAAACACCGTCGGACGCACACAGGAGAGAAACCATATGAATGTATTACTtgtcATAGAAGGTTTGCTGCAAAAGAAACGCTAAATCGTCATATACGTCTTCACACTGGCTATAAGCCACACTGTTGTCCATATTGTGGGAAACGTTTTATTCAGGGCACACAATTGAAAGCTCATCTTTATTATCATACAGGACAAGCAGGGATGCCGCCTGCTGAAACGTTTGTATGCGATTTATGTGgtaagaaatttaatagaaaagcACGATTAAATGAACACGTAAAATTTATACATCTCGGTGCAAAACCTTTTGCATGTGAACAATGTGGGAAAACATTTATAAGAAAAGAAGATCTCAATAGACATAAAATTATCCATTCAGGCGTTAGAGGtgaatttcttttaacttag
Protein Sequence: MIGLGIRAFQSIPGLRRHEFSCNVTSNKNRKLERGRNRKKEVIPIGTCQTSNSLKDTTDETTVNGQTNHCNENPVINACPSSLIDKNADGNKENEISETSNQTSNFTLSVVSCKAEANGNVSDEVDSAVTYKDVTYPNPNAISSQSDDHHSDGLEVVDDLIVKDESKNDEVAQHKCMYCANVYKTFRGLRRHESNCKKKHPLNNNTALTDASTEAEIAVPSEPVANSSDTPYTNSNDNLNIENENSCHCCGEDKETAHIIGDLECKDCLKLFRLKSSLERHIRIVHNGESHECPQCGAKSPDKGTLATHMYTHTGNDNLNSDDENKCHCCGEDKETAHIIGDFECKDCLKFFRLKSSLERHIRVVHNGESHECPQCGAKSPDKGTLARHMYTHTGLKPYSCPVCNQEFSRKYHLVRHNMQTGCDGKEKPIFPCQVCGREFNRKDNLREHLRAHAGQTKRKKKYTCGCCGVECEANELLKLHKKIHNGERQYACDFCHKKFPSSGALKKHRRTHTGEKPYECITCHRRFAAKETLNRHIRLHTGYKPHCCPYCGKRFIQGTQLKAHLYYHTGQAGMPPAETFVCDLCGKKFNRKARLNEHVKFIHLGAKPFACEQCGKTFIRKEDLNRHKIIHSGVRGEFLLT*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -