Basic Information

Gene Symbol
Iswi_1
Assembly
GCA_011037195.1
Location
JAAEAF010014071.1:189189-200945[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 5.8e-06 0.024 16.7 0.0 3 41 811 850 810 850 0.96
2 2 0.0046 19 7.4 0.1 3 21 913 932 911 939 0.90

Sequence Information

Coding Sequence
ATGTCTAAGCCAGAAGACAATTTGGATACTGGAGATAATACGGCAGAGAATTCGaaTGATTCTTCTGGAGACACGCTGTCatcaaaaggaaaaaatgaagATTTCGAAACGAAAATTGAAAATGATCGTGCCAAAAgatttgaatttcttttaaaacaaaccGAAATTTTCTCACATTTTATGACCAATCAAGGAAAAACCAATAGCCCTACTAAACCAAAACCAGGACGTCCGAGAAAGGATGCAAACAAACCGCCAGGGAATCAAGGGATACCGCCGGTTAATCCAGCTGTGGCAGGCGATGCTGGTGACCATCGACATCGAATGACTGAACAAGAAGAAGACGAAGAACTGCTGGCTGAGAACAACACTGCCACAAAAACTGTTGCCAGATTTGATACATCAccgttttatataaaaaatggtgAACTAAGAGATTATCAGATTAGAGGATTGAATTGGATGATATCATTGTATGAACACGGTATCAATGGTATCTTAGCAGATGAAATGGGTCTGGGCAAAACTTTACAAACTATATCTCTGCTTGGCTATATGAAACACTATCGAAACATTCCCGGACCTCATATGGTCATCGTACCTAAATCAACTTTAGCAAATTGGATGAATGAATTCAAAAAGTGGTGCCCATCACTTAGAGCTGTCTGTCTCATTGGTGACCAGGAAGCTAGGAATGCTTTCATTCGTGACACTCTAATGCCTGGAGAATGGGATGTTTGTGTGACCTCCTATGAGATGATAATCAGAGAGAAGAGTGTATTTAAAAAGTTCAACTGGCGATATATGGTCATAGATGAAGCgcatagaattaaaaatgaaaaatctaaacTATCTGAAATTGTTAGAGAGTTTAAGACTACAAACAGGCTGTTACTTACTGGAACTCCATTACAAAACAATTTGCACGAATTATGGTCATTACTTAATTTTCTACTTCCAGATGTATTTAATTCTTCAGATGATTTTGATTCATGGTTTAACACGAACAGCTTTCTTGGTGACAATTCTTTAGTTGAGAGACTTCATGCTgTATTACGTCCATTCCTTTTAAGAAGACTAAAAGCCGAAGTAGAGAAGAAACTTAAACCtaagaaagaagtaaaaatatacgTAGGCCTTAGTAAAATGCAGCGTGAATGgtatacGAAAGTATTGATGAAAGATATTGATATTGTGAACGGAGCTGGGCGAGTGGAGAAAATGAGattgcaaaatattttgatGCAATTGAGAAAATGTAGTAATCACCCGTATCTGTTCGATGGTGCAGAACCAGGTCCACCCTACACTACTGATGAACATTTGatATACAATAGTGGTAAAATGGTAATTCTAGATAAACTTCTTCCTAAATTACAACAACAAGGATCTCGTGTTTTGGTATTCAGTCAGATGACTAGAATGATTGACATATTGGAAGATTATTGCTTTTGGAGAGGTTATAATtATTGTAGACTTGACGGAAATACCCCACATGAGGATAGACAGAGGCAAATTAATGAGTACAACGAAGAAGGATCTAAGAAGTTCATATTTATGCTTTCCACAAGAGCCGGCGGTCTGGGTATCAACCTGGCAACAGCCGATGTGGTCATTATTTATGATTCAGATTGGAATCCACAGATGGATTTGCAGGCCATGGATCGTGCTCATCGTATTGGACAGAAGAAACAAGTTAGAGTGTTCAGACTAATTACGGAAAATACTGTTGAAGAAAAGATTGTTGAAAGAGCTGAAATTAAGTTACGTCTTGATAAATTGGTTATCCAGCAAGGTCGCCTGGTTGATAATAAAACCGCATTAAACAAAGACGAAATGTTGAACATGATCAGACATGGTGCGAATCATGTATTTGCTAGTAAAGATTCGGAGATCACCGATGAAGATATTGATACGATACTTGAACGTGGTGAAGCAAAGaCAGTCGAGATGACAAAGAAATTGGAATCACTAGGCGTGGATTCttctttaaaagattttatgaTGGAAGCTCCTACAGAGTCTGTTTATCAGTTTGAAGGAGAAGATtatagGGAAAAGCAGAAAGTTCTTGGCATTGGAAGTTGGATAGAACCGccgaaaagagaaagaaaagcaAATTATGCGGTTGATGCATACTTCAGAGAAGCGTTAAGAGTCTCAGAACCGAAAGCGccaaaaGCTCCCAGACCTCCAAAACAACCAATTGTTCAAGATTTCCAATTTTTTCCCAACCGTCTGTTTGAGCTGCTAGATCAGGAGatttattatttcagaaaaactgTAGGTTACAAggTGCCTAAGAATCCTGAATTAGGTTCTGATGCGCCTCGCGCTCAAAAAGAAGAACAGAGGAAAATAGATGAAGCCGAGCCTTTAACTGAAGAAGAAGTTGCTGAAAAAGAGAAGCTGTTGACTcagGGGTTCACCAATTGGACAAAAAGAGATTTCAATCAGTTTATAAAAGCGAATGAAAAGTATGGCCGTGATGATATCGATAATATTTCTAAAGATGTTGAAGGTAAAACACCGGAAGAAGTACGCGCCTATTCCGAAGTATTTTGGGAAAGATGTAATGAATTGCAAGATATTGACAGAATTATGGGTCAAATAGATAGAGGTGAAGCAAAAATTCAACGACGTGCTAGTATTAAGAAAGCATTGGATACAAAGatgAGCCGTTATCGGGCTGCTTTCCATCAGCTGAGAATAGCTTATGGCACTAATAAAGGTAAAAATTACACTGAAGAAGAAGATAGATTTCTGGTGTGCAtgctacacaaactaggatTTGACAAGGAGAATGTTTATGAAGAATTAAGAGCTATGGTCAGGTGTTCACCACAATTTCGTTTTGATTGGTTCATTAAATCTCGTACAGCAATGGAATTACAACGCCGCTGTAACACATTGATCACGTTGATCGAAAGAGAGAATCAAGAACTGGAAGAACGTGAACGAGCGGAAAAGAGGAAAGGTCGTGGCGGAAGAGGTGGTGGTATGGCTGGCAAACGTAAGAGTGAGAGTATGACCGTAGCTGCAGGTACGGTTCCTTCGACGCTGCAGCAAGGAGGAGCCACTCCACAACCACCACCACCGGCTCAAGACAAGAACAGCCCGgccagaaagaagaaaaagtaa
Protein Sequence
MSKPEDNLDTGDNTAENSNDSSGDTLSSKGKNEDFETKIENDRAKRFEFLLKQTEIFSHFMTNQGKTNSPTKPKPGRPRKDANKPPGNQGIPPVNPAVAGDAGDHRHRMTEQEEDEELLAENNTATKTVARFDTSPFYIKNGELRDYQIRGLNWMISLYEHGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVIVPKSTLANWMNEFKKWCPSLRAVCLIGDQEARNAFIRDTLMPGEWDVCVTSYEMIIREKSVFKKFNWRYMVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSSDDFDSWFNTNSFLGDNSLVERLHAVLRPFLLRRLKAEVEKKLKPKKEVKIYVGLSKMQREWYTKVLMKDIDIVNGAGRVEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLIYNSGKMVILDKLLPKLQQQGSRVLVFSQMTRMIDILEDYCFWRGYNYCRLDGNTPHEDRQRQINEYNEEGSKKFIFMLSTRAGGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITENTVEEKIVERAEIKLRLDKLVIQQGRLVDNKTALNKDEMLNMIRHGANHVFASKDSEITDEDIDTILERGEAKTVEMTKKLESLGVDSSLKDFMMEAPTESVYQFEGEDYREKQKVLGIGSWIEPPKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPIVQDFQFFPNRLFELLDQEIYYFRKTVGYKVPKNPELGSDAPRAQKEEQRKIDEAEPLTEEEVAEKEKLLTQGFTNWTKRDFNQFIKANEKYGRDDIDNISKDVEGKTPEEVRAYSEVFWERCNELQDIDRIMGQIDRGEAKIQRRASIKKALDTKMSRYRAAFHQLRIAYGTNKGKNYTEEEDRFLVCMLHKLGFDKENVYEELRAMVRCSPQFRFDWFIKSRTAMELQRRCNTLITLIERENQELEERERAEKRKGRGGRGGGMAGKRKSESMTVAAGTVPSTLQQGGATPQPPPPAQDKNSPARKKKK*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01500297;
90% Identity
iTF_01479377;
80% Identity
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