Basic Information

Gene Symbol
F54F2.9
Assembly
GCA_011037195.1
Location
JAAEAF010005033.1:10153-20730[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 1.2 5.2e+03 -0.3 0.0 7 26 22 41 21 60 0.75
2 4 4.7 2e+04 -2.2 0.0 17 24 101 109 100 110 0.84
3 4 0.0075 31 6.8 0.0 2 39 297 337 296 341 0.85
4 4 6.6e-12 2.8e-08 35.7 0.1 4 44 384 429 382 431 0.94

Sequence Information

Coding Sequence
ATGAAGTTAAATTCTATATTTACCATCTTTATATTTGAAGTTGTCTCAACGTACGCTTGGGATTCAGAAGATCTTGAAGTATTCGATGTGGTAGAGGAAGTTGGTGAGAATTTTTATTCACTACTAGGTGTACCCAAGGATGCCTCAGcttcagaaattaaaaaagcttTTCGGAAGCTTTCATTAACAGTTCATCCAGATAAAAATAGTGCTCCTGATGCGGAAATTAAGTTTAGACAGttagCCTCTGTGTATGATATATTGAAAGATGCGAATAAAAGGGCCAAATATAATGATGTATTGGAACATGGCCTGCCAGATTGGAAACAAGCCGTCTACTATTATCGAAGAGTACGAAAGATGGGGTTGGCCGAAATggcaattatattatttattattattacaattggTCAATATCTAGTCGCATGGGCAGCATACTTTGAAAGGAAATATACAATCgaagaaattgttaatctaaaaagtaaaaaactacaaaaacgGCAAAAAAAGGGGAAAACAATAGATATGGAAACGTTCAATAAGCTTCCAGAAATAGTGGCTGGTCTTCCAAAACcaagtgtttCATGCACATTACCATGCCAGATTGTCAAATTAACATGGTTTATGATAGTCGATGCACCACCTTTAACATATAGATGGATAAAACATTACTATCAGGAGAGACAAAGGCGTAAAGAGGAAGAAGCTCAgaaactTGAAGAACCAGCTGAAGAGGAGATCGTTCCACACCGTGAACGTGGTCCTCGTAGAAGAAAAGGTTTTACAGTCCCTGAACTACATGgggataataatagtaaaattgaTACATCCAAACAATTCAGTGAGAAAAAATCCACTGTTGATACTGAAGAGAACTATATGGCTGGTGGTCTTTGGACTGACGATGATTTTGTAGATCTTCTAAGACTTACTAAAAAGTTCCCACCTGGTACTCATGAAAGaTGGGAGCGAATAGGCGCTGCAATGAAAAGGCCATCCAATGAAGTTGCACATATGGCGCATCGGATAAAGGATGAAGGTTTTAAACCTGTAATACAACAGtcggaagaaagtgaaattaaagaagaagaacCCAAAAAGGTTAAAACGAAAGGTGGTAAAATTTGTGAAGAAGCTGAAGAAAGTATTTGGACACAAGCTCAACAGAAAGCTTTTGAACAAGCTTTAGCTACACATCCAAAAGGATCTGCCACGGATAGATGGGAAAAAATTGCTAAATGTGTACCTGGTAAGACAAGGGAGGAATGTATGTTACGGTTTAAGAATATCGCCGCttatataaagaagaaaaaggaaaCGGCAAGTAATGAAAAATGTAATCCTGAAGCAACAATAAATGAAGAGACTacataa
Protein Sequence
MKLNSIFTIFIFEVVSTYAWDSEDLEVFDVVEEVGENFYSLLGVPKDASASEIKKAFRKLSLTVHPDKNSAPDAEIKFRQLASVYDILKDANKRAKYNDVLEHGLPDWKQAVYYYRRVRKMGLAEMAIILFIIITIGQYLVAWAAYFERKYTIEEIVNLKSKKLQKRQKKGKTIDMETFNKLPEIVAGLPKPSVSCTLPCQIVKLTWFMIVDAPPLTYRWIKHYYQERQRRKEEEAQKLEEPAEEEIVPHRERGPRRRKGFTVPELHGDNNSKIDTSKQFSEKKSTVDTEENYMAGGLWTDDDFVDLLRLTKKFPPGTHERWERIGAAMKRPSNEVAHMAHRIKDEGFKPVIQQSEESEIKEEEPKKVKTKGGKICEEAEESIWTQAQQKAFEQALATHPKGSATDRWEKIAKCVPGKTREECMLRFKNIAAYIKKKKETASNEKCNPEATINEETT*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01301573;
90% Identity
-
80% Identity
-