Basic Information

Gene Symbol
-
Assembly
GCA_011037195.1
Location
JAAEAF010008470.1:29889-32629[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 0.021 87 5.3 0.1 22 42 279 300 267 304 0.84
2 5 1.2e-09 5.1e-06 28.5 0.4 3 44 310 353 309 355 0.95
3 5 0.0005 2.1 10.5 0.3 2 43 362 407 361 409 0.93
4 5 4.1e-08 0.00017 23.6 0.0 1 46 416 461 416 461 0.97
5 5 1.2e-13 5.1e-10 41.3 0.5 2 34 470 503 469 505 0.94

Sequence Information

Coding Sequence
atggaaaaaaagaacGGGAAATTGAATCCATCTACTTCTCTTTTAATGGGAAATTTGGTAGATGGTGTTATAGATAACGCAATAACTGATGAAGATCCAATTATTAGGtatctgaaaaatgaaaattataatacagATGGCAGCGATAGTGAATCAAGGGATTTTGGTAGCGATGATAGTGACATTGAAGTACTAATTGAGGAGCATATACTTCTTGAAAAATTGAAGCAAGTATCTGGAAAAAAGAACGAGGAACATGATAAGtccctaaatattttagaaaccgAAGAAAAAGATCCACTCTCACTTGCAGAAGACACAAGTGCCTGTGAATTAACGgctctgaaaacaaaaatagaagaaGCTAtgcaattcaatttaaaaatgcgTGAAGAACTTCTTGCAATGGAAAGGAAACTTATCCAGAAGCATCGCGAAGCCATTGAAAGGAAGCAAGAAAAAGGGAAAGACCTAGCAACAGAAGTTGAAAtttcaaaagtaaaatattttgcaCTACCTTCGGAAaggtttttttatagttttcgagcaccatattttaaatttgatggATCTGCGGCACCCTTAAATGTAGATTCAGAAAAGTTGTCGGCAACAATTATACCATATCTTCTAGAAAATGACGAATGGAGCACAGCTAATATTGCTTCCTTGGGATTAGCTGTTAGAAAGTACATACTTATAGAAAAGGTTACTGTAGGATCTTCTGTAAGGAATAAAGGTGTAAAagggaatttttttaaaacaaaacaatttcaaaatttaaaaaatgcccCTTTAAGTGAATTAATCAAAGATAGAGATGATAATAGTTTAGATTGGAAAGAGATCGCAAACTATATCAATCGACCAGTCTCTGCAAAAGAATGTCGTCAGTTATGGTCATTACATATAAAACCAACTCTAAAAGAATGGTCTGATGAAGAACACTCAAATATGTTAAGAATCGCTAAGAcacacaatttacaaaattgggATACAATAGCCCAAGAGTTAAATACAGGAAGATCTGGATACGAATGTTTTCTGCGTCATCAGAACACCTTTGCATTGGAATGGAACGATGGTAAATGGTCTAAAGAAGAGGAAGCgcatttgaataatattatagaaaatgtaaaaattggaaattatatttcatgggataaagttaattatttcatGGATACAAAATTTGTTGAACAGATTTATGCAAAGTGGCACGGATTTCAAGCACCACATATTACACGAGGACATTTCACTGAACGTGAAGATAGAATTCTATTGGGTATGATACATAAATTTGGAGCAGATTTGAAATCAGTTGCAGCAGTATTGAAAAATCGTTCAATGGCACAGTTAACGGCCAGATATAAAGATCATTTATTGCCACAATTACATCTTAAAGTTGGAGAATGGACATttgaagaagatgaaaaattaTTGAGTCTAGTTGAAGAGCACGGAGAAACTAAATGGGCCACTATTGCTAAACATTTTCAGACGCGATTGAGAAATTTATATGAAGCTGCTGAAACGGATGATTGGTCGTCGAAAGATAGAGCCTTATTTCATAGAAGTATACTAGATTTATGGGCAAATGGTAATACTCAACAAGATTTAATGAACTGGCATAGAATGTTTTGTTCTTTATTCGCAGCACCTGCCTTATTGTCACATTTTGAATTAGATAAATGGAAACATTACTTGCCAGAAGGTTAG
Protein Sequence
MEKKNGKLNPSTSLLMGNLVDGVIDNAITDEDPIIRYLKNENYNTDGSDSESRDFGSDDSDIEVLIEEHILLEKLKQVSGKKNEEHDKSLNILETEEKDPLSLAEDTSACELTALKTKIEEAMQFNLKMREELLAMERKLIQKHREAIERKQEKGKDLATEVEISKVKYFALPSERFFYSFRAPYFKFDGSAAPLNVDSEKLSATIIPYLLENDEWSTANIASLGLAVRKYILIEKVTVGSSVRNKGVKGNFFKTKQFQNLKNAPLSELIKDRDDNSLDWKEIANYINRPVSAKECRQLWSLHIKPTLKEWSDEEHSNMLRIAKTHNLQNWDTIAQELNTGRSGYECFLRHQNTFALEWNDGKWSKEEEAHLNNIIENVKIGNYISWDKVNYFMDTKFVEQIYAKWHGFQAPHITRGHFTEREDRILLGMIHKFGADLKSVAAVLKNRSMAQLTARYKDHLLPQLHLKVGEWTFEEDEKLLSLVEEHGETKWATIAKHFQTRLRNLYEAAETDDWSSKDRALFHRSILDLWANGNTQQDLMNWHRMFCSLFAAPALLSHFELDKWKHYLPEG*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-