Tinf016773.1
Basic Information
- Insect
- Triatoma infestans
- Gene Symbol
- lov
- Assembly
- GCA_011037195.1
- Location
- JAAEAF010001538.1:92934-102284[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.6e-18 1e-14 55.9 0.0 1 44 338 381 338 382 0.96
Sequence Information
- Coding Sequence
- ATGTGTTTTTACTTTACGAGTCCATATTTCCAAAGGATATTTTCCGAAACTCCTTGCAAACATCCAGTGATCGTATTGAAAGATCTGCGAGGATGGGAGGTGCAGGCTATTGTAGACTTCATGTACCGAGGGGAGATCAGTGTTGGGCAAGAACAATTGAGCTCGTTGATAAAAGCTGCAGAATCACTTCAGGTCCGAGGACTGGCGCACACAGAACGTATCCCGGTGATGGGCTCGGGAGAGAAAGAGCCGGCTGGTGCTCGGGAGCGGTGTTATAGCCCGCCGGTGGCTAATCCAAGCACGCCACCACATCATCAGTTCAACGGCAGCAGCTTACCGCCCACAGCGCCGCCTCCTCATCACGCCATGCGCCTTCCCCAAATACCTCACCTCCCTAACATATCTTTTAGTGAAATGTCGGACAGACATTGCACTTCACCTACACCCAGAAGAAAACAGGCAAGGCCGAGAAGAAGGTCCGGCGATGCTAGTGTACCTCAGGATCTTAGCAAAACTCCTAGTTCACCATTAAGATCGGAAATGGCTGAGAATCTGTCAATGAAGAAACCAGCCCCTAGTAGTACTACACCTACTTCAAGACAAAATAGTACACCTACGCCGCCccaaattaatATGAAACTGGAAAACGAAGACTCTGACCTGCCAGATTTGAGCCAGCAACATCCCGTAGAACTTACAACAGCACCTCAAGAACCAAGAATGGAATTTAATCCAACAGAGACGCTGGGTCTGCCGCCCCCCCAGCATGAATCTCCCCTAGAAAATTCATTCCCTCATTTGGCTTCAATATCAGCTTTATCGCTCACACCTCCACATATGTTTTCTCTGGATTCACAACTTGGACTGTTTCCAGGATTGGAGAATTGTCGAAATCCCTTGCTAAATGACCTTACAGATCAACGGATGGAAAATCATATATCTAGCAAAAAGAAacTGGGACGTCCAAAGGGGCAACATAGTGCGCCGCGAGGAGGCCCTCCCAGATCGTGGACCAATGCCGAATTGACTGAAGCTCTACAACACGTATGGAACAAAAAAATGACCACGTCACAAGCATCCAGGATATTTGGTATTCCATATAATAGTCTGTTGATGTATGTTCGAGGAAAATATGGAAAGTCACTCAAGTTGGAACAGTTAAAGAAAGAATGTTTTGGTGAACTTGGAAGCCCGCTCGATCTCCTTGGTTTGGGTAATATctcaaacaataataatccaCCACCACCAGGCAAACCTCATAAGATGCCAGAACCAGACCATCTAATGCTGGGACCACCCGGTTTCAATCATGCCTATCCACCAGTACCTCCAAGCTTCTATCCGGACTTTGGTGCATCGTTTCCAGTACCTGTTGGTATGGTGCATTTATTGCCGCCATCAGAAAAGAATCGTGAACAAAGTGGCGCAATTGTTGGAGGCGGTGGAGGTGGTACGCCCGGTGTTGTGGATTATACTAAAGATGATGATGAATCTAGGCACCGGAATTCCACGACGCCGTTGGATTTTGCCAAGGACGATATGCGCTCCAGTCCGATGGCATTGGATTTTGTGAAAGAGGAACATGAGCGTGCCAATTGCACAGATCCGGATGAGAATAGTAACAGTCCTAGGGCTCAACCTCCGCCCCAGAGGCGGGAGATTCCTGTAGGACAACCACATAATGGGCAAGATTGA
- Protein Sequence
- MCFYFTSPYFQRIFSETPCKHPVIVLKDLRGWEVQAIVDFMYRGEISVGQEQLSSLIKAAESLQVRGLAHTERIPVMGSGEKEPAGARERCYSPPVANPSTPPHHQFNGSSLPPTAPPPHHAMRLPQIPHLPNISFSEMSDRHCTSPTPRRKQARPRRRSGDASVPQDLSKTPSSPLRSEMAENLSMKKPAPSSTTPTSRQNSTPTPPQINMKLENEDSDLPDLSQQHPVELTTAPQEPRMEFNPTETLGLPPPQHESPLENSFPHLASISALSLTPPHMFSLDSQLGLFPGLENCRNPLLNDLTDQRMENHISSKKKLGRPKGQHSAPRGGPPRSWTNAELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLKKECFGELGSPLDLLGLGNISNNNNPPPPGKPHKMPEPDHLMLGPPGFNHAYPPVPPSFYPDFGASFPVPVGMVHLLPPSEKNREQSGAIVGGGGGGTPGVVDYTKDDDESRHRNSTTPLDFAKDDMRSSPMALDFVKEEHERANCTDPDENSNSPRAQPPPQRREIPVGQPHNGQD*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01479359;
- 90% Identity
- iTF_01478934; iTF_01301718; iTF_01301553; iTF_01479359; iTF_01479528;
- 80% Identity
- iTF_01478934;