Basic Information

Insect: Triatoma infestans
Gene Symbol: br
Assembly: GCA_011037195.1
Location: JAAEAF010013440.1:14358-20566[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 2.3e-07 0.0009 20.9 0.0 14 37 188 212 177 216 0.85

2 3 3.2e-13 1.3e-09 39.6 0.0 6 40 230 263 225 266 0.91

3 3 0.0001 0.4 12.4 0.2 4 26 329 351 328 352 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	2.3e-07	0.0009	20.9	0.0	14	37	188	212	177	216	0.85
2	3	3.2e-13	1.3e-09	39.6	0.0	6	40	230	263	225	266	0.91
3	3	0.0001	0.4	12.4	0.2	4	26	329	351	328	352	0.93

Sequence Information

Coding Sequence: ATGGAATCGGCGGAAAAATATTGTATGAAATGGAGTAGTTATCAAAAACATATTGGATCTTTTTTATCTGAACTCTGCGAATCCGAAGTTTTAACAGATGTCACCATTTGGGCTGAAAACCAGAAATTTAATTGCCACAGAGTTATTCTCTCAGCTTGTAGCCCGTATTTTCAGGAAATTCTGTCTAACACATTATGCAAACATCCAGTTATAATATTAGCCGGTATTAATGCGGAAGAtatcaaaactataatttatttcatttatcatGGTGAATTAGACAATATAACATACGATagatttatttcagttttaaaaactGCTGAGTTGCTTAAGATATGTGGATTGACTGAGGTTATAGATCATATACCtccaagaaaatgtttagaAGATTTAGAAGAGATAATAATGATGAACGAAGGAGAAAATGAATCCACCCAATTACTGCAAgaAGGAGGAATTTCCAAATCTTCTGAGGAAACTattgacaaaaaacaaaaaccaaagaAACATCAAAGGAAATATAGtgAGGGCAGTCTCGGCTGGGCGTTAAGCGATATGGAAAAGGGTATGTCATTGGTTGAAGCTGCACGGTTACATAAAATACCAAGATCTACTTTATATGCTAAAGCCAAACATTCTGGATTGAGAATTGCAAGCCGAAAAGAGCATACAAATCAAGATTGTCAGGCTGCTGTACAAGCTGTCGCAGGTGGACTTAGTTTGAAGAGAGCAGCAGAACAGTATGGAATCCCAAAGACGGTGCTTTGGAGGAGAGTACAAAAACGGCTTGATATatgttcaaatttgaaatctagGAGGAAGAAACAAGAGCGCACCCTAAAATTAGAAGAtgataaaacttgtattttgcAAGATGGAAAATTAATTGCCCAAAACAGGATCATTGGATCATCAATACGTGCCAACAGAATGAAAACTGTCGATATGCATGATTTGAATACTAAGGATAGTAAACAGTACAGATTGGCTCAAGCGTTGAATGCCTGTAAAGAGGGTAAAATGTCTCAGGCTGTTGCGTCCAGAACTTTCCAGGAACAAGGAAAATTTGACGGGAATAATCGGCCACGATCTGGAAATTGGAAAAGGCGTTATGATTTAAATATAGCGACGTGGAACCTACGTTCCTTATATAGACCTGGAGCACTTAAATTATTAATGCATGAAATTGACAAATACAAGGTTGATATATTGGCGCTGCAGGAGGTAAGATGGACAGGAAGAGGAGTGATGGATAGAAGGGATTGTACGGTGTATTTCAGCTGTAATGACAGGAACCATTCCTTAGGAACTGGATTTATTGTACGTAGACCTTTAAGGGGCAACATTATCGACTTCAAAGCCATTTCACCTAGACTGTGCGTACTGAGATTAAGGGaaagattttataattatagcATTATCAATGTCCACGCACCATCAGAGGATAAAGGGGAAGAGGAGAAGGACGATTTTTGCGACGCACTGGATAGAGCGTATGAGCGATGCCCTAGAGATGACGTGAAAGTGATTGCCGTAGATTTAAATGCTAAAGTGGGGAAAATGGAGGGTAGTCCCAACGTAGGCATGCACAGCTTACATAACGAGCATAATGACAATGGATTTCGGCTGATAAGTTTCTCAGCAACACATGGTATGGTGATAGGTGGTACTCTCTTCAGTCATAAGAACGTGCAGAAAGGAACCTGGGTCTCTCCTGACGGTAATACAGTAAACCAAATCGACCACGTTCTAATAGATGGACGGCATAGGACAAATCTCCTAGATGTGAGAGCATATCGAGGAGCGAATGTTGACAGTGACCATTACTTAGTTTTAGCTAGATTTAGatgtaaaatatcaaaaacatcAAAAGAACGAGGAGCTAAGTTTAAAAAGTATAACGTACAGCGATTGAAGGAAGAAGGAAATCGAGAGAAATTTAAATGA
Protein Sequence: MESAEKYCMKWSSYQKHIGSFLSELCESEVLTDVTIWAENQKFNCHRVILSACSPYFQEILSNTLCKHPVIILAGINAEDIKTIIYFIYHGELDNITYDRFISVLKTAELLKICGLTEVIDHIPPRKCLEDLEEIIMMNEGENESTQLLQEGGISKSSEETIDKKQKPKKHQRKYSEGSLGWALSDMEKGMSLVEAARLHKIPRSTLYAKAKHSGLRIASRKEHTNQDCQAAVQAVAGGLSLKRAAEQYGIPKTVLWRRVQKRLDICSNLKSRRKKQERTLKLEDDKTCILQDGKLIAQNRIIGSSIRANRMKTVDMHDLNTKDSKQYRLAQALNACKEGKMSQAVASRTFQEQGKFDGNNRPRSGNWKRRYDLNIATWNLRSLYRPGALKLLMHEIDKYKVDILALQEVRWTGRGVMDRRDCTVYFSCNDRNHSLGTGFIVRRPLRGNIIDFKAISPRLCVLRLRERFYNYSIINVHAPSEDKGEEEKDDFCDALDRAYERCPRDDVKVIAVDLNAKVGKMEGSPNVGMHSLHNEHNDNGFRLISFSATHGMVIGGTLFSHKNVQKGTWVSPDGNTVNQIDHVLIDGRHRTNLLDVRAYRGANVDSDHYLVLARFRCKISKTSKERGAKFKKYNVQRLKEEGNREKFK*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01478917;
90% Identity: iTF_01478917;
80% Identity: iTF_01478917;