Tinf058234.1
Basic Information
- Insect
- Triatoma infestans
- Gene Symbol
- bab2
- Assembly
- GCA_011037195.1
- Location
- JAAEAF010013428.1:894865-912346[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 4.7e-12 1.9e-08 35.9 0.0 1 39 383 422 383 426 0.90 2 4 1e-12 4e-09 38.0 0.1 2 39 438 475 437 478 0.92 3 4 1.1e-16 4.2e-13 50.8 0.0 2 45 493 537 492 537 0.98 4 4 2.9e-17 1.2e-13 52.6 0.0 1 42 544 586 544 587 0.97
Sequence Information
- Coding Sequence
- ATGTATAGCGGAGACGACGGGGAAGACGACATGGGATCTGCACAGCATTACTGCCTCCGCTGGAATAATTATCAATCAAATATGACTTCAGTTTTCCACCATCTACTCAGAACACAAGCTTTTGTTGATGTTACCCTTGCATGCAATGATCAGTCTCTCAAGGCGCACaagGTTGTCCTTTCTGCATGTTCTTCTTATTTCCAAAAACTTCTGCTAGAAAACCCATGTAAACATCCCACCATCATTATGCCGCAAGATGTTTGCTTCACTGACCTCAAGTTCATCATAGAATTTGTTTACAAAGGAGAAATTGATGTTTCACAAGCTGAATTGCAaTCCTTGCTGAAGACAGCTGACCAGTTGAAGATTAAGGGATTGTGTGAGGTGGAAGATGGCAAGGAAGGTGCTGAAGTTACACCACTTCCTCCAACGCCAAGGAGACGGATCTCCCATAGGCAACAAAGACTTGCAGCGAAGAGACACTTATATAGACAAAGGTTGCAGAGTGATGCTCagGACGATACTCCGGAGTGTATGGATGTTGGTGATGACGGtgctgatgatgatgatgatgatgatgacgacGAAGAACCCAAAGAATTGCCGGTAGTAGTTGTTCAGCAGAGCCCTCCAGCACCACCAGAAGATGTTATCATGGGTCCACAGCAGCCTTCAGCAGCAACGGCCGCTATTCTACATCAGCAGCCACAATCTGTAGCCGTTGGCCATGATTCTCCACAGATTGGATGTGAAGCGGCTGCAAGAGAAGGTGAAGTCACAATGGGTGCTGAACCTAGTCCACCATCGGCTACCCTTGTAACCACAATGCAAGCTCCAGAAGCCACTCATCGTGATATTGCAGtgGATTCACGAGATCTGGCTGATGAAGATAAAGTGAAATTTGAAACTCTAAGAGCGATAGATCATGCAGAGCAAATGAAGGTAGAAACTCATATAACTGACAGGacGGTGCAGACTGTTGATGATGAGGAAGATCCAGCGATGCATACGATGATGATTACACCAGAACTTTTAGGTCTGATTCCTTCATCACAATCAgATTGTAGTGATGTTTGCTCCACGTCTACAGTGAAAAGTAATTATTCAACCATTTGTACGGGACTAAATGGTACAAACAAATCATGGACTCAAGAAGATATGGATCAAGCGTTGCAAGCACTTAGACATCAAACTATGTCATTGAGTAAAGCCAGTGCCACTTATGGAATACCTTCTACAACTTTGTGGCAACGGGCGCATCGACTTGGTATTGACACTCCCAAGAAAGAGGGACAAACGAAGTCATGGACTGAACATAGTCTTAATACGGCACTTGAAGCTTTAAGAACTGGTCAAATTTCTGCAAATAAGGCTAGCAAAGCTTatgGCATTCCCAGTAGTACACTATACAAAATTGCAAGAAGGGAAGGCATTCGTCTTGCGGCACCATTCAATGCAGCACCAACTGCTTGGGTTCCTGAAGATCTTGAAAGAGCTTTAGATGCCATTCGTTCTGGTCAGTGTACCGTGCAAAGAGCAGCTGCTGAATATGGAATACCTTCAGGCACATTGTATGGCAGATGTAAAAGAGAAGGTATCGAATTATCCAGAAATAATCCCACCCCTTGGTCTGAAGAAGCAATGATGGACGCTCTGGAAGCTGTCagAATTGGTCAGATGAGTATAAACCAAGCGGCAATTCATTTTAATCTTCCATATTCATCGCTGTATGGTCGTTTTAAACGTGGTAAGTATGAAAGCATAAGTGGAAATCAAGATGTAACGGCTACACCTCAACAGCAACcgcaacaacaacagcaacctCAAACAACTGCACAACAGCCTCCTCCACCTTCATCTGCTACAGCAACACAGgaaattgaacagaatgatctgacaaatcaacaacaacaacaacaacaacagcagcagcagcaacaacaaccaCCCCAACCACAACAGCAGCATAGTCCAACAAATACAGCTCAACAACAACCACAGATTATGTTAGTACAGTATCAACAGCCATTGCATGTTTATCAGCCAGCTACGGCTACATGA
- Protein Sequence
- MYSGDDGEDDMGSAQHYCLRWNNYQSNMTSVFHHLLRTQAFVDVTLACNDQSLKAHKVVLSACSSYFQKLLLENPCKHPTIIMPQDVCFTDLKFIIEFVYKGEIDVSQAELQSLLKTADQLKIKGLCEVEDGKEGAEVTPLPPTPRRRISHRQQRLAAKRHLYRQRLQSDAQDDTPECMDVGDDGADDDDDDDDDEEPKELPVVVVQQSPPAPPEDVIMGPQQPSAATAAILHQQPQSVAVGHDSPQIGCEAAAREGEVTMGAEPSPPSATLVTTMQAPEATHRDIAVDSRDLADEDKVKFETLRAIDHAEQMKVETHITDRTVQTVDDEEDPAMHTMMITPELLGLIPSSQSDCSDVCSTSTVKSNYSTICTGLNGTNKSWTQEDMDQALQALRHQTMSLSKASATYGIPSTTLWQRAHRLGIDTPKKEGQTKSWTEHSLNTALEALRTGQISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTAWVPEDLERALDAIRSGQCTVQRAAAEYGIPSGTLYGRCKREGIELSRNNPTPWSEEAMMDALEAVRIGQMSINQAAIHFNLPYSSLYGRFKRGKYESISGNQDVTATPQQQPQQQQQPQTTAQQPPPPSSATATQEIEQNDLTNQQQQQQQQQQQQQQPPQPQQQHSPTNTAQQQPQIMLVQYQQPLHVYQPATAT*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01301721;
- 90% Identity
- iTF_01301721;
- 80% Identity
- iTF_01478907;