Basic Information

Gene Symbol
ct
Assembly
GCA_011037195.1
Location
JAAEAF010000053.1:296366-330461[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.1e-27 4.3e-23 83.1 0.0 3 72 335 405 333 410 0.95
2 3 1.8e-31 6.8e-27 95.3 0.1 3 77 705 780 703 782 0.96
3 3 1.3e-31 4.8e-27 95.8 0.1 3 76 899 973 897 976 0.96

Sequence Information

Coding Sequence
atgaattactccTATACTAGACAAGTGACAAAACTTCGAGAGGAAGGATTCGATGAGATGTACATTTATGAAACCTTCATACTAGATTCTCAAGCAGCGGGGAAGAGACGGGGAAGCTTTGTCTTCGCTTCCCAGCCAGTCTACACTCTGTCGTCGCTTCGCTACCGCAATCCGCGCGAGGCTCCTCCTATCAGCGAGATCTCCCAACTTTTAGAAGACGTACAAAGACTACAAAATAGTATAggaaaattacaagaaaattctGCCAATCAAATTGCTAGGCTTGAAGAAGAGCTCGAGCATAAGCGACAACACATTTGTAGGTTGGAAGCTCGTCTGGAAGCCCAAAAAGATTATAACGAACTCAAGAGGCAAGTTAGTAGTCTGAGAGGAGAAGAAATGTGTAAACAGGAGGAACCTGAAAAGTGCTCTTCAGAACTTGCTAAACCTCCATCGTCGTTAACGCCGTCTGATGTACAGACAAGCAGCGACGTACCTACCTTACATAATGTTGAAACATTTGGTTCATTTCTTGGTGAGGAAATAGTTGCAAACTGGAGGCGATCCGTGGAAAGAACCATTGTATCACAATCAGCTAGACCTACCCCACCACCAAATACCTGGCCGGCCCAATTTGAGggtAAAGTGAAATCTGAAGAACCAAGAGAAAGGGATGGCGATAAAGGATCTCCAGCAGGTGACTTACCATTAGTGAACGGTACCTCCAGTCCAACAAACCATGAACAAGAACAACAGCCAACTAATGGAATGTGTGGTAACATGAATGTGGGACTAAACAATAACGTCCTACCATCTGGTGGTCCGCTCAATCTGAACGATGTTATAAAAAGTCCCTTTAGATTTGATGACAGATCACCATTTAGGTTAGAAGATCCTGGATGTATGGTTGGAAGATTTGGAGAATCGTTGATACCAAAAGGAGACCCAATGGAGGCTAGACTCCAGGAAATGCTTAGGTATAATATGGATAAATACGCCAACCAAAATCTAGATACGCTTAGTATAGCCAGACGAGTACGGGAACTCTTATCTATACATAACGTAGGTCAGAGGCTTTTTGCAAAATATGTACTTGGATTATCACAAGGTACTGTATCAGAACTGTTGTCCAAACCAAAACCTTGGGATAAATTGACTGAAAAAGGACGAGATTCTTATAGAAAGATGCATGCATGGGCTTGCGACGAGAATGCAGTGCTTCTTCTTAAATCCCTCATCCCAAAAAAAGGTAAAGATAGCGGTGGAGGTGTTAGCGTGCTCGCTGGACGCGGTGCCGAAGCAGAAATGACTGAGGAGAGGATAGCGCATATCCTGAGCGAAGCCAGTCATATGATGAAACCTCAGCAGCCTGAGGACACTCACAGTAATGACGATTCAAAGTCACCAAATCATCctcagAGTTCTGAATCACCTCTTGGGCGAGATAATTCTCAAAATCGCCGgttgaaaaaatatgaaaacgaTGACATATCACAAGAACAAGTAGTAAGAATATATCAGGAAGAATTGGCGAAGTTAATGGGTCGACGGCTAGAAGACCAACCATTTCCAGGATTAGTGTTTCCTCATTTTCTGAGTAGCGGTGGTTCAGGTGAAGATGTAAGAATAGCAATGGATGCTTACCAAAGAGAGCTAGCAAAATTGAATGCTGGTCCTGCAGGTGGTCCGTTACATCATCCGCTTGCTGCATTACATGCACAAAGTTTACAGGCAGCGCATAACGGTATTGCGCAAGATTTATCGTTGCCTAAACAAATCAAAAGAGAAAAAGGTGCGAGCGGAAGTAGCGGTAATGGTGGTGGTTGTGCGGAAGATGATAAGAAAGAGGATCAACGGCATAGCGGAAGTGGCAGCGCGTTTTCGCTTGTCAGACCCAAAATGGAACCAGGTTCTCCTCTTGGTAATGTTATCCTACCACCGGAAGATGTAGGTAATGGATCGGGAGCTGCAGCCGTTAGCCCACTTCAGAGGATGGCATCTATTACAAATGCTCTTATTTCGCAACCACCTTCGCAACACCATCATTCACCATCTCAACGACCTCTAAAAGCCGTTCTTCCTCCAATAACTCAACAACAATTTGATCAGTTCAATAATCTAAACACAGAAGAGATTGTTCGTAAGGTCAAAGAACAGTTGAGTCAATTTTCTATCAGTCAAAGGCTTTTTGGCGAATCAGTATTAGGTTTATCACAAGGGAGCGTGTCAGACTTATTAGCGCGACCTAAGCCTTGGCATATGCTCACACAAAAAGGTCGAGAACCATTTATTAggatgaaaatgtttttagaagaTGAAAATGCTGTGCATAAACTGGTCGCATCTCAATATAAGATAGCACCGGAAAAGCTGATGAGGACTGGCGGATATGGTATTAATCCTAGTACCCCACATTCAAAAGGAATGCCAAGTGGTTGTGGCAAGTTTGGTGGGAACGAagcatatttacataattctgGTATGCACATGACACAACAGCATACACCAGCACCTCCTCCAGTTTCACCACTCACACCACCAGATGTAAAAAAGTGTATATTGCCTCCACAACAAGGTAGCCAAAGTTCGGCCTGTCATACGCCAGTCGGCATGCAACAGTATGCTGGTGCCCCAGCAACTTTAAAAAATCTTCCGCAAGTATCACCATCGGTTTATGAAATGGCCGCCTTAACACAAGATCTGGATACACAATCAATTACCACTAAAATCAAGGAGGCCCTGCTTGCCAACAATATCGGACAGAAgATATTCGGTGAGGCAGTGTTGGGCCTTTCTCAGGGCTCTGTGAGTGAGCTACTGTCTAAACCGAAGCCATGGCATATGCTCAGCATCAAGGGTCGTGAACCATTCATTAGGATGCAGTTGTGGCTGTCCGACTCGAACAACATAGACAAACTCCAGGCCATCAAAACAGAAAGGAGAGAACTCAATAagCGGCGGCGAGGCTCTGGCCAACAAGATAATAGTAGCGATACATCGTCTAACGATACTTCAGAATTCTATCACAGTGGAGGAGGTGCAGGTAGTCCTCCATCGGCAAAAAAGCATAGAGTCTTCTTTTCGGAGGAACAAAAAGAAGCACTAAGGTTGGCATTCGCCCTAGATCCTTACCCAAGCCTGGCAACGATTGAATTCCTTGCCAACGAACTCAGCCTCGTTTCTAGGACTATCACTAATTGGTTCCATAATCATAGAATGAGGTTGAAGCAGAGCCCTCAAGGAGAGTCTCTGACAAGGGAAGGTCAGGGCTCAGGTTTCGACCCAGTACAATTTAGGATACTGCTGAGTCAACGCCTGGGTCTACCACTTCCCTTTCCAGCACCGTTCTTCCATTCTACAGCCGAACTGTCGGGAGCTATGTCCCGTGGCGAACTTGGGAGTCCGCGTGAACCACAAGGGCTAGATCTCTCGCTAAAGCACGATTATGAAGCTGAAGAGACTGAAAGCCAAGCTGGTTCTGAAGATTCATTTTCTGGTATGACTGAATCATCAAGCCGAGTAAATCCTGAACCTAGGGCTTCGCGTCGTAAGCCTGCTGCTCCACAATGGGTTAATCCTGATTGGCAACAACAGGAACCTGAAGTCATAATTAATGGAGTATGCGTCATGAGAACAGAGGATTTTGATCGAGAAGGTCGTGAAGAAACAGTAAGAGTAGAACCGACACCGGTACCTGAGGAAAGAACAACTCCGGAACGCACCCCCGAGACCCCGACTGATGAGTCTCTTAACCCTTCGCTTCCCGTTAAGCAAGAAGTAcgcgatgaaaagtgggaaaaCCCATATTAA
Protein Sequence
MNYSYTRQVTKLREEGFDEMYIYETFILDSQAAGKRRGSFVFASQPVYTLSSLRYRNPREAPPISEISQLLEDVQRLQNSIGKLQENSANQIARLEEELEHKRQHICRLEARLEAQKDYNELKRQVSSLRGEEMCKQEEPEKCSSELAKPPSSLTPSDVQTSSDVPTLHNVETFGSFLGEEIVANWRRSVERTIVSQSARPTPPPNTWPAQFEGKVKSEEPRERDGDKGSPAGDLPLVNGTSSPTNHEQEQQPTNGMCGNMNVGLNNNVLPSGGPLNLNDVIKSPFRFDDRSPFRLEDPGCMVGRFGESLIPKGDPMEARLQEMLRYNMDKYANQNLDTLSIARRVRELLSIHNVGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDENAVLLLKSLIPKKGKDSGGGVSVLAGRGAEAEMTEERIAHILSEASHMMKPQQPEDTHSNDDSKSPNHPQSSESPLGRDNSQNRRLKKYENDDISQEQVVRIYQEELAKLMGRRLEDQPFPGLVFPHFLSSGGSGEDVRIAMDAYQRELAKLNAGPAGGPLHHPLAALHAQSLQAAHNGIAQDLSLPKQIKREKGASGSSGNGGGCAEDDKKEDQRHSGSGSAFSLVRPKMEPGSPLGNVILPPEDVGNGSGAAAVSPLQRMASITNALISQPPSQHHHSPSQRPLKAVLPPITQQQFDQFNNLNTEEIVRKVKEQLSQFSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGGYGINPSTPHSKGMPSGCGKFGGNEAYLHNSGMHMTQQHTPAPPPVSPLTPPDVKKCILPPQQGSQSSACHTPVGMQQYAGAPATLKNLPQVSPSVYEMAALTQDLDTQSITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDSNNIDKLQAIKTERRELNKRRRGSGQQDNSSDTSSNDTSEFYHSGGGAGSPPSAKKHRVFFSEEQKEALRLAFALDPYPSLATIEFLANELSLVSRTITNWFHNHRMRLKQSPQGESLTREGQGSGFDPVQFRILLSQRLGLPLPFPAPFFHSTAELSGAMSRGELGSPREPQGLDLSLKHDYEAEETESQAGSEDSFSGMTESSSRVNPEPRASRRKPAAPQWVNPDWQQQEPEVIINGVCVMRTEDFDREGREETVRVEPTPVPEERTTPERTPETPTDESLNPSLPVKQEVRDEKWENPY*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01301523;
90% Identity
iTF_01301523;
80% Identity
iTF_01478724;