Basic Information

Gene Symbol
Kdm5
Assembly
GCA_011037195.1
Location
JAAEAF010001935.1:121824-129399[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4e-23 4.3e-19 70.7 0.0 2 89 90 173 89 173 0.93

Sequence Information

Coding Sequence
ATGGAGTGTGGGAAATCAGATATGTACGAAGAAcctcagttttatttttctgtacCACCTGAAGCTCCGATATTTGAACCTACCAAAGATGAATTTAAGGATCCATTAGCTTATATAAACAAGATAAGACCAATTGCAGAAACTGCTGGAATTTGCAAAATAAAACCACCAATTGATTGGCAACCACCGTTTGCGGTTGATATTGAACAGTTTAAATTCACCCCACGGATCCAGCGGCTAAACGAATTAGAAgcGAAAACTaggattaaattgaattttttagacCAGATTGCTAAATTTTGGGAACTACAGGGTTCAGTTTTAAAGATTCCATTGGTGGAACATAAAATATTGGATCTATATACATTACATCGAGTTGTCCAATCTGAAGGTGGGTGTCTTGCTGtttcaaaggaaaaaaagtGGGCATTCGTAGCTGTAGCTATGAATTTACCTACAAATCGTGGATTACCGGCACTACTACGGTCTCATTATGAAAGAATTTTGTATCCTTTCGATGTATTCCAAGCAAATAAAGTTACTCTTTTACCTTCTCAAAGACTTAGTGCAAGTGAAAACGAACTAAAAAGGTTAAAGTTATATAAGGCCGGTAATAAAATGACTAATATTTTGTCTAAAAAGCAGGATAAACCAAAGGCAATTAGAAAGATATCTGTTGAAGTTGATCCTcTTGCTAAGTACGTGTGCATGAAGTGTCGTAGAGGCGATGTAGAAGAATCAATGCTGCTATGTGATGGATGTGATGATAGTTATCATACATTCTGTTTGACGCCTCCTTTATCAGAAATTCCTGAAGgtgacTGGCGATGTCCAAAATGTGTTGCAGAAGAAGTTAGCAAACCTATAGTACCATTTGGTTTTGAACAGGCTAGTAGAGAATATACCTTACAGCAGTTTGGAGAAATGGCTGACCGCTTTAAATGTCAATATTTTAGCATGCCTGTGCATAAAGTACCACGATCAGTTGTAGAAAAAGAGTTTTGGAGGATTGTGTCTTCATTAGATGAAGATGTTACAGTTGAATATGGGGCCGATTTACATTCCGTGGAACATGGTTCAGGTTTTCCAACAAGAAGTTGTTATAAATGGGAAGAGGTGAATCCTGATATCGCTGAGTACGTTGAATCtaaatggaatttaaataatatgcCTGTCCTTGAGGGGTCAGTCTTAAGTCATATAAACGTTGATATCTCTGGAATGAAAGTTCCTTGGATGTATGTTGGTATGTGTTTCGCCACCTTTTGTTGGCACAATGAAGATCATTGGAGTTACTCAATCAATTATTTACATTGGGGAGAGGCTAAAACATGGTATGGTGTGCCTGGTAGTTCAGCCGATGATTTTGAACGAACTATGAAAGCGGCTGCGCCTgaactttttcaaaatcagcCAGACCTGCTACATCAGTTAACCACACTAATGAATCCTAATGTGCTTATGGATGCAGgCGTGCCAGTTTATCGAACTGATCAGATGGCCGGAGAATTTGTTATAACATTTCCGAGGGCCTATCATGCTGGTTTTAATCAAGGATACAATTTTGCGGAAGCTGTCAATTTTGCACCATCAGATTGGCTGAAGATGGGCCGCGAGTGCATTAGCCACTATGCAAGTTTACGTAGATACTGTGTATTCTCTCATGATGAATTAATATGTAAAATGGCTGGAAAAGCTGATCTACTTGATCCAAAAGTTGCTGCGGCTACATATCAGGATATGATAATAATGGTTGAATGtgaaaagaaattaagaaaatctcTGTTGGAATGGGGTGTAAGCAATGCAGAACGtcaattatttgaactattagCTGATGATGAACGGGTTTGTGAAGTTTGTAAAACAACATGCTTCCTTTCTGGAGTATCCTGTGTTTGTAGTCCAGGCCTGTTGGTCTGTCTGTATCATTATAGTTCTCTGTGTAATTGTCCATCTAATAAGCACACCCTCAGgTACCGCTATACTCTAGACGAATTGCCAGTATTATTAAAGAGCCTCAAGCTTAAAGCGGAGAGTTATGATGCTTGGGCAATTAGCGTTAAGAAGGCACTGTTAAATAGTGAAATGATTAAGAAAGAAATAGGTAagccttaa
Protein Sequence
MECGKSDMYEEPQFYFSVPPEAPIFEPTKDEFKDPLAYINKIRPIAETAGICKIKPPIDWQPPFAVDIEQFKFTPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSVLKIPLVEHKILDLYTLHRVVQSEGGCLAVSKEKKWAFVAVAMNLPTNRGLPALLRSHYERILYPFDVFQANKVTLLPSQRLSASENELKRLKLYKAGNKMTNILSKKQDKPKAIRKISVEVDPLAKYVCMKCRRGDVEESMLLCDGCDDSYHTFCLTPPLSEIPEGDWRCPKCVAEEVSKPIVPFGFEQASREYTLQQFGEMADRFKCQYFSMPVHKVPRSVVEKEFWRIVSSLDEDVTVEYGADLHSVEHGSGFPTRSCYKWEEVNPDIAEYVESKWNLNNMPVLEGSVLSHINVDISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEAKTWYGVPGSSADDFERTMKAAAPELFQNQPDLLHQLTTLMNPNVLMDAGVPVYRTDQMAGEFVITFPRAYHAGFNQGYNFAEAVNFAPSDWLKMGRECISHYASLRRYCVFSHDELICKMAGKADLLDPKVAAATYQDMIIMVECEKKLRKSLLEWGVSNAERQLFELLADDERVCEVCKTTCFLSGVSCVCSPGLLVCLYHYSSLCNCPSNKHTLRYRYTLDELPVLLKSLKLKAESYDAWAISVKKALLNSEMIKKEIGKP*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-