Basic Information

Gene Symbol
grh
Assembly
GCA_011037195.1
Location
JAAEAF010014360.1:115827-136659[-]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.035 5.2e+02 1.8 0.1 10 59 71 120 62 141 0.79
2 2 5e-10 7.6e-06 27.4 0.0 27 66 370 409 355 423 0.85

Sequence Information

Coding Sequence
ATGATCAGAATAGTTTTGGGGTTTAGGAACAGTGGGGCAAGTAGCCTATTGGGCACTGCTGCGGCAGGTTTGAAAGCTGGCTGCACAGGCTCTACAGGCTTAGATCTGGCTGGCCAGCCCTTGGCCGACATACAGGGACTATTTCTTGGCCAAGGGGCCGAGTCGGCTGGAGCGGCTGGAGCCGGCCAGGTGAAGAGGGAGCCTGAAGATCTCAGCCACAGTCGGCAACAACAGCACGCAGCTAAAGAATCACATGAAAAAGGTATTAGGCATAAAGTGGTGCTTGTGGCTACTACAAATTCTGGGGCGCACCAACAAGATCTCGTGGTTGATGTGGTCAACAATAATAGTAGTGCATCAATTAAGGACGAATTTATGCACTCACCGCAGCAGACTAACAGGTCTATGAACGGAACCCCTTCTTCAACTTCATCAATGATGGCCCAAGACGTCGGACCAACTGCTCCTATTGAAATCATTTCCGAAAATCTGAAACCAGGTATAAATTATGGATCGCATCACATTTTCAGCACAATGACGGCCGGCCATACGGCCGATCAAGACAGCGACTCTCCATCGCCAAATCCATATACTGAACACCATTACAGTAGTGGCAGTTCTGCCGTGGCCAGTGCACACCACACTGGATACTTGCAAGGCGCATCTAGCCGACAACCAACAGCTCTGTCCACATCATTCACTGATCCATATTATAGAGAATACTTCGCTGATACCAGCTATGCTGCACAGCTGAGGAATTTCGCTGATGGACCCGAACCGCCTGCTACTATTGTTGAAAGgTATGTTCGCCAAAGTTCAGCGTATCACAACAAAGGCGTGATAGCTGCCGCAGGCTTAACGGTAGACTTGCCTTCACCTGATAGTGGCATTGGTGCAGATGCAATAACACCCAGGGATCAGACTACCATACAACagtcaTTTGAATATTCAGACATGTGCCCTGGCCCATTATTGACTGAGAGCGGTTGTCCTCGAGCTAGTTCTGCCCATTCATCACCAGGTACAGTGCCAGCCAGGTCTAGACCGTGGCATGATTTTGGGAGACAGAATGATGCCGATAAAATACAAATACCTAAAGTgTTCTCACAGTATGGATTCAAATACCATCTGGAGACTCCGATCTCAACAAATCAAAGAAGGGAAGATGACAGGGTTACCTACATCAACAAAGGCCAATTCTATGGTATCACTATGGAGTATATACCAGATCCAGATAGGCCTCTAAAAACGCAGACTGTAAAATGGATTAGAGGCCACAGTGGGATCCGAGGCAATGAAATGGCAGACACTCTAACAAGGAAAGGTAGCGTCTTACATCAACCTAGCATGTATGAAAGTCTTCAGAGGCTAGGCGAGGCATATTCGGTACATACAACTTCCCTTCAAGCTGCCTAA
Protein Sequence
MIRIVLGFRNSGASSLLGTAAAGLKAGCTGSTGLDLAGQPLADIQGLFLGQGAESAGAAGAGQVKREPEDLSHSRQQQHAAKESHEKGIRHKVVLVATTNSGAHQQDLVVDVVNNNSSASIKDEFMHSPQQTNRSMNGTPSSTSSMMAQDVGPTAPIEIISENLKPGINYGSHHIFSTMTAGHTADQDSDSPSPNPYTEHHYSSGSSAVASAHHTGYLQGASSRQPTALSTSFTDPYYREYFADTSYAAQLRNFADGPEPPATIVERYVRQSSAYHNKGVIAAAGLTVDLPSPDSGIGADAITPRDQTTIQQSFEYSDMCPGPLLTESGCPRASSAHSSPGTVPARSRPWHDFGRQNDADKIQIPKVFSQYGFKYHLETPISTNQRREDDRVTYINKGQFYGITMEYIPDPDRPLKTQTVKWIRGHSGIRGNEMADTLTRKGSVLHQPSMYESLQRLGEAYSVHTTSLQAA*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-