Tvap014720.1
Basic Information
- Insect
- Trialeurodes vaporariorum
- Gene Symbol
- nfxl1
- Assembly
- GCA_011764245.1
- Location
- HIC:3142478-3164544[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 1 1.8e+04 -4.3 1.7 15 19 200 204 200 204 0.87 2 9 0.071 1.3e+03 -0.4 0.8 4 10 235 241 234 241 0.95 3 9 7.7e-08 0.0014 18.6 16.4 1 19 249 266 249 266 0.99 4 9 3.8e-08 0.0007 19.6 13.7 1 19 302 320 302 320 0.93 5 9 0.94 1.7e+04 -4.0 1.6 6 10 345 349 344 349 0.89 6 9 6.4e-10 1.2e-05 25.3 16.7 1 19 355 373 355 373 0.98 7 9 3.3e-08 0.00061 19.8 11.3 1 18 408 425 408 426 0.97 8 9 4.9e-05 0.89 9.7 13.9 1 18 460 477 460 478 0.98 9 9 2.2e-07 0.0041 17.1 11.6 1 18 487 504 487 505 0.93
Sequence Information
- Coding Sequence
- ATGATGGCATGGATGGTCCTAACATAACCTAACTTTTGATCAGCTACGATTTAAACTTATGACCTGATCGTTATTTGATTTACTAGTATGGCCATGAGACAGTCTGGGGGCGGTCGTGGTAGAGGGCGTGGACGAGGGCAAGAAGTTGAGAACAATGTCTGGGCACGGAGAGCTGCTGCTGCGTCGGACATATCAAAGGCTGAAAAAACCTTTAAACTTGCGAAGCAAAAGAACGAAGAAAATCTGAAACGAGCTCTGGAAAATACTTATGAATCTTCATCAGATGAAGATGATTTAGAGAAAAATGGATCCGGTGCAGTATCGCTGATCTCATCAGTGTTCCAAGGATACTCAAACATCGGAGGAGAACTCACTCACCTCGGACGCACGGAGCAGCATATAGAAAATGCTCTGCAGTCGGGCGCTGTTACATGTCTCATCTGTATTTCAAGTGTTAAACGGCCTGATGCTATTTGGAGCTGCAATATTTGTTACTGTGTCTTCCATCTTCAGTGTATTCAGCACTGGGTTCGGGACAGCGTGAGTCTGAAGCAGCTGAACTCTGGCCAATTAGTAAAAACGAAAATCAATTGGGTCTGCCCGAATTGCAGGAACGAATATGAGCCAAGTGCAGCTCCGCAGAGGTACTATTGCTTCTGCGGTAAAGTGGAGAAGCCGCCCGTTCATCCCTGGCTGATCCCTCATTCTTGCGGTGAAACTTGTGAAAAGCCTTTGCAGCCTCTCTGCGGCCACGATTGCCTTTTATTATGCCATCCAGGGCCCTGTCCTCCATGTCCGAAAACCGTGAGCTATAAATGTTACTGCGGAAATAGTCAACCGAAGCCTCAAAGATGCGGCTCCAAAGAATGGTCTTGCGGGAACGAGTGCAAAAGAAAACTTCTGTGCATGAAGCACACTTGTACTCAGCCTTGTCATCCGGGCGATTGTATGACTTGTCCGAAACAGTCCGTCCAATTTTGTCTCTGCGGTTCGTCGAAAAAGACAAGACCTTGTGCCTCTCCTGTGTGGCAGTGTACGAAAGTTTGTGATAAGGCTTTGGACTGTGGACATCATTCTTGTGAAGAGGTGTGTCACAAAGGCGATTGCAAACCGTGCAAGTTAAACGGGGAACGCTTCTGTCCGTGTGGGAAAACCTCGGCCCGCGTATCGTGTATCGAAACGGTCCCCACTTGCGGCGATACTTGTGACAAAATCCTGGAATGCGGTGCTCACCGATGCATTCAAAGGTGTCACACCGGCAAATGTGGAGCGTGCTTGGAAAGGACTGTTAAACTGTGTCGTTGCGGAAGGAATTCAAAGGAGGTTCCGTGCGTCAAAAGTTTCTTCTGTGAAGCCAAGTGCAAAGAAACGAAGGATTGCGGAAAACATGCCTGTAACCGAAAGTGCTGTGATAAAATCTGTCCTCCATGTGATAAACCGTGCAACAAAACTTTACAATGTCGCAATCACAAATGCGCCGGAGTTTGTCATCCTGGCCCATGCTTTCCTTGCATGTTGACAGAATCCATCACGTGCCGTTGCGGCGGGACAGAAATTAAAGTTCCTTGTGGTACAAAAAAAGGATTAACCCAAAGCCGCCGAACTGTCTTAAAAATTGCAAGTTACCTTCAAATTGTAATCACAAAACATCACTTCAAGAAAAACATAGGTGTCATTTTGGCCCGTGTCCACCATGTCAGATGAAATGTAACATTCGTATGAAATGCGGGCATCATTGTCAATTGAAATGTCACACAAATGTACTAGTCGAAATCACACCTAAAAATCCATCCACCGCACCACAGGGTGGTTCAAATTTGACGAGAAAAACGTTTCCTTGCGGGCAGTGCGATGAACCAGTTGTAATTCCATGTCTGGGCGGTCACGAGCAGCTAACAGTGCCTTGCAAAGATGCTAAAACAACTTCGTGCGGTAGACCCTGTGGTGCAGTTTTGCCATGCACAAACCATACGTGTCAAAAAATATGTCACGATATCAAAGATCCTGACTCAAAATGTGAAAGTTGCGATCGGCGTTGTGAAAAACCGACTCTGGAAGGATGCACTCATCCTTGCTTGCAAACTTGTCATCCGGGACCTTGCAAACCATGCAACATGTTATTAAAGAAGAAATGCCATTGCAACGTCCTTCAAAAATGGATCGATTGTTATCAGTGGTGTAGCGTTGATACGGAGGGCAAAAATAAATTAATATCCTGTGGTGGCCTTTGTCCCAAGAAATTACCTTGCGGACATCCATGCACTGAAAACTGCCATCCAGGAGATTGCCCGAACGCCGACACTTGCCGGAAGAAGACGAAGGTATTCTGTGCATGTCACAGGATTAAAAGCAATATCTCTTGTGATCTCATTCGTGCGGGCAGAATTGTCGAGTGCGACGAAATCTGTAAAAAGAAACTAGAAGAGGAACGATTGGTGAGTCTTTGA
- Protein Sequence
- MMAWMVLT*PNF*SATI*TYDLIVI*FTSMAMRQSGGGRGRGRGRGQEVENNVWARRAAAASDISKAEKTFKLAKQKNEENLKRALENTYESSSDEDDLEKNGSGAVSLISSVFQGYSNIGGELTHLGRTEQHIENALQSGAVTCLICISSVKRPDAIWSCNICYCVFHLQCIQHWVRDSVSLKQLNSGQLVKTKINWVCPNCRNEYEPSAAPQRYYCFCGKVEKPPVHPWLIPHSCGETCEKPLQPLCGHDCLLLCHPGPCPPCPKTVSYKCYCGNSQPKPQRCGSKEWSCGNECKRKLLCMKHTCTQPCHPGDCMTCPKQSVQFCLCGSSKKTRPCASPVWQCTKVCDKALDCGHHSCEEVCHKGDCKPCKLNGERFCPCGKTSARVSCIETVPTCGDTCDKILECGAHRCIQRCHTGKCGACLERTVKLCRCGRNSKEVPCVKSFFCEAKCKETKDCGKHACNRKCCDKICPPCDKPCNKTLQCRNHKCAGVCHPGPCFPCMLTESITCRCGGTEIKVPCGTKKGLTQSRRTVLKIASYLQIVITKHHFKKNIGVILARVHHVR*NVTFV*NAGIIVN*NVTQMY*SKSHLKIHPPHHRVVQI*REKRFLAGSAMNQL*FHVWAVTSS*QCLAKMLKQLRAVDPVVQFCHAQTIRVKKYVTISKILTQNVKVAIGVVKNRLWKDALILACKLVIRDLANHATCY*RRNAIATSFKNGSIVISGVALIRRAKIN*YPVVAFVPRNYLADIHALKTAIQEIARTPTLAGRRRRYSVHVTGLKAISLVISFVRAELSSATKSVKRN*KRNDW*VF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -