Tvap010539.1
Basic Information
- Insect
- Trialeurodes vaporariorum
- Gene Symbol
- ZFHX3
- Assembly
- GCA_011764245.1
- Location
- HIC:27955153-27968593[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 10 6.8e+02 1.1 1.3 2 19 153 170 152 176 0.93 2 15 9.2 6.2e+02 1.2 0.2 1 22 194 215 194 218 0.84 3 15 0.15 9.9 6.9 0.2 1 23 316 339 316 339 0.91 4 15 0.029 2 9.1 0.6 2 22 444 464 444 467 0.90 5 15 0.26 18 6.1 0.3 3 23 481 504 479 504 0.88 6 15 0.011 0.77 10.4 1.7 1 23 531 553 531 553 0.97 7 15 0.0074 0.5 10.9 1.1 2 23 560 582 559 582 0.96 8 15 0.0014 0.097 13.2 3.2 1 23 688 712 688 712 0.92 9 15 0.0078 0.53 10.9 0.6 1 22 732 753 732 756 0.89 10 15 0.0013 0.09 13.3 0.2 1 23 824 848 824 848 0.93 11 15 0.097 6.6 7.4 0.2 2 21 942 961 941 962 0.93 12 15 0.23 16 6.2 2.0 2 19 1111 1128 1110 1133 0.91 13 15 0.00017 0.011 16.1 2.5 1 23 1821 1843 1821 1843 0.99 14 15 0.0018 0.12 12.9 0.2 1 23 1930 1952 1930 1952 0.98 15 15 0.0091 0.62 10.7 0.4 2 23 2136 2158 2135 2158 0.96
Sequence Information
- Coding Sequence
- ATGGCAGATATGGCCTACAACCAAGCTTTATTAATTCAAATGATGACTGGTGGCCAACTCCCTCCTCATTTGCCACCAGAGTTGGCACCTCACATGGATATGGGTCTTAACCCAGAAACAATGGAACCTCCGCCTGAACCAGCAGATCCTAACCCGGAGCATTTGTTTCATTGTTGTGTGTGCAATAATTTCTCAACTGATTCTTTAGAGGCGCTTACTCATCATTTGGCTGCTGATCGAACGAAAATTCGGGAGCAAGAAATCCTAGCCGTTGTAGCCGGTCATTACGTGTGTAAGTTATGCACGTACAAAACCAACTTAAAAGCAAACTTCCAGCTGCATTGTAAAACAGACAAGCACTTACAACGGCTGCAGCATGTGAACCACGTGAAAGAAGGAGGGCCTCGAAACGAGTGGAAACTGAAGTACCTGTCATCTCCCGGTGGGGTGCAAGTTCGATGTCATGCCTGTGATTATTACACGAACAGTGCTCATAAATTACAACTTCATTCAGCCGGTCAGCGGCACGAAGTTAGTGGTTTACTCTTTAGGCATATCCGAGATAGTGACGGCAATGTTTATCGCTGTGTTCTCTGCGGATTCTCATCTCGAGCTCGATTACCTCTCCTCCAGCACGCTCGATCGATGAAGCATTTACAAATGGAGCAGCTCCACCAGCTTCAAAGACGCAGTGAGGGCAAAGATGTGCATGCTGATATTAGTGAAGTCTTCCAAGTTCTCAATCAACCATCAGCCGACTCAGATTTTGAACAAGAACAAAAAGAAAGCGGAAGTGATATGGGAAGTAGAGGAGAAAGAGAAGAAAAACTTGACCTAAAAGACTTGAACAGTGCCGCGGCAATGATGCAGCTTGCATTAGAACAGCAGATCTTACAGCAAAAAGCTCACGAAGAGGAACAGCAAAGATCTAATTCAGAGGGCGAGCACGCCTGCCCGTATTGCAACTATGCAACGAATTCGGAAATGCGTTTACAAGCTCATGTTCTAGCTCAGCACTCCCAATCAGATCGACCTCAATCGGCAGCATCATCCTGTCCCAACTCTCCAGCAAAAGACTTTCTCTGCCCTTTGTTTGCAAAGGCTATTAATGTTAGTCGACCAGTCTCATTGGCTCAACGCGACGGCCCGGCCCTCTCAGGCGCAGCACCAAACTCCACCGGTCACCATCTAAGTCCATCCTCTATAGCATCATCTGGAAGCAAAGATCTCGAAAAACATTCCGAAACAAATTCAAGGTGTGATCCTGACGATAGGGACGAACCTCATAACCTATCCTCTTCCGAGGAGCAATGTGATAACGATGAAAATCGCTGCCAAGCCTGCTCCAAGAATTTCCGCAATTTAGACGAGCTTTACTCTCATCAAAACGAATCTGGTCATTTAGAAATCAAGCAAACTCCTTCCGGTCCTGGCTATTTGTGCTGGAAAAAAGGGTGCAATCAATATTTTCCCAGTGCAAACAGCCTTCAAATGCATTTTAGAGAAATTCATTCGTCTGCCTCTAGAAATGCGAGCTTGAGTCAAAGTAGTGTGTCAACAGTATCCATCTCAGAAAAGCATGTTTACAAATACAGGTGTAATCAATGTAGCCTAGCATTTAAAACCATGGAAAAATTGCAGCTGCACTCGCAGTATCATTTGATTCGAGATGCTACAAAATGTGTGTTATGTGGCAGAAGTTTCAGATCAATTTTAGCCCTTCATAAACATGTCGAAACTTCGCATACGGAACTGTCAGAGGACGAACTAAACGCTTACAAACAAAGTCTGATGAACAATCCTCTTCTTTTAGCTGGTATTAGTGGTCAGGTATTAGATCCATCAACGAATGAGCTTCTGAGAAAAGAGTCGATGAAAGGTGATTCAGAAGAAATGGAAATCGACGAATCACCCAGCAAAGACTCGGTCGAAGATGGGGCACAAGGAAACGATGGCGAAAACAGCGATGATTCCATCATTTACAAAGAGCAGCAGTTTTTAGAAGATTACCTAAATAGCCAAGCAATAGCAGAGGACACTTACAATGATCCCAATAGGAAGTACAAGTGTCATCGTTGCAAAGTTGCTTTCACTCGACAAGGTTATCTAACAAGCCACAATAAAACTCTTCTTCATCGCAAGGGAGAAAAATTAAGTTACCCCATGGAAAAATATCTGGATCCAAATAGACCTTACAAATGTGATGTATGTAAAGAGTCTTTTACTCAAAAGAATATTTTATTAGTTCACTATAATTCAGTAAGTCATCTTCATAAACTAAAACGAGCCATGCAAGAGCAACAGAACAACAATAATAACAATAGTAATAATAACAACAATAATACTGCGGCGATGTCACCTCACGCCGCAGCTGTTGCTGTTGCTGCTAGCCTCGGTGTTTCTCCTCCATCGAGTCTACTCTTGTCGCAGAAATCGAGTCTCATATCTGAGGATGATGACAAGAAACCTTTCAAGTGTAATATATGTAAAGTTGCCTATACTCAAGGGTCCAATCTTGACATTCATTTGCGATCAGTGTTACATCAAACACGCGCTTCAAAATTGCAAGATTTAGCATTAAGTGACCAGCACAAGAAATTAATGCAAGACATTCTCTCGATAGCATCCTCACCGAAGCAACAAACGTCTCCGTCGCCAAGTAGTGGCGTGGCTAATCAAGTGCCATCGCCCAATCAGGGTACAAACATAGTTCCTTCTACTGCTGCCTCTTCCGCTACTTCAGTTCCTACTAGTTTAACGAATTCTTCTCCAACGAATCAAACTTCTGTGATACCTTCAACGCCTAACAAACACGGTATGTTATCCTGTCAACGGTGCAGTGCACTTTTTGCCAATCAGGATCAACTGAACACTCACCAGCAACTCTATTGTCTTTTTGGAAGTCCGATGTCCATGTTCCATCCTCTTCCGACGCCTCCTCACTCATCAGCAAACACTACTCTGCAATCTCCAAGACAAACTCCGCCTCCTATGCCTTTAACTCCATTCAATGACGAGCCTCTAACGAGGATAATTCAAGCTAAAAAATCCTCTCACATGTATAAGCATCTCCTAGAAAGTTTCGGTTTTGACCTAGTTATGCAATTCAACGAAAATCATCAAAGGAGACAGAAGAAAGAAAAAGAAGAAAGTGAGAAACTTCTCGCCGAATTACACGCGGTGAATGCTGCAAACAACGAGCAGGAAACTGTCGTAAAAATGGAAGAAGAAGTAAAGGAACAAGATGTCTCTGAAAGTAAAGAAGAAGAAGAAATGAAACAAGACGAGGAAACTTCAAATTCCGAGAATCTCCCTGAAGTTTCAAAATCGACGTGTCAACACTGTAACAAAGAATTTTCAAGCGTGTGGGTATTGAAAGCTCATTGCGAAGAGGTGCATAAAGACTTAGTTCCTCTCGATTTCCTTGAAAAATACGCGCACCAAATTAAGTGCGAGTATGAGAAGAAAGTTGTTCCAACTACCACCACTCCACCCTCCACTACGACCACCTCAAGCGTTATGAATACTCCGAGCACAATCTCTTCGAGCGCAGTGACAAGTTCTAGCCCAGATATTACTCCCGAAAAAGAACATGATGATAACAAAGAGGAGCTTCATGCCAAGTTATCTGCCAGGGAAAGCCAGCATAGTTCTCAGCATGAAAATCCGAATCCACCGAGTACTCCAACTGCTCCTTCGACCCCTGCTTCAAGCACTGATTCCATCCCTCCCAATGTCAGCTCTTCGACGCCCAGTAATCAAAGTGGACCGATGCCTATGAACCTTGCGCAGCAAATGAACGAAATGCAAGCTGCTCTAAATGCCATGGCAGCGTCTCAGCTACAACAGCAACTGCAACAGTTCAATCCAATGATGATGGGCATGGCTGGACTAGGTATGGGCCTGCCTCTGGGTCTCAACATGCCAGCGCTCGCAGCAATGAACTTGCAACCACCACTGGTGCCCATGATGATGCCTCCTCCTCCATTTGAACCCATGGTCGGCGGTCAGAATCCATTGTTTTCGCCTCAGTCTGATCATTCTTCCATGATGTCAAAACAGCAGCAGCAATTCCTTCAACAACATCAGCAGCAGCAAGCCGCACAAGCAACGGCTAATGCGTCCCAGCAGAAGAGAGCTCGAACGCGCATAACTGACGACCAACTGAAAATTCTCAGGGCTCATTTCGACATCAATAACTCTCCGTCCGAAGAACAAATACATGAAATGGCCGCTCAAAGTGGTTTGCCTCCCAAAGTTATCAAACATTGGTTTAGAAACACTTTATTCAAAGAAAGACAACGCAACAAAGACTCACCTTACAATTTCAACAATCCTCCGTCCACAACTCTAAATTTAGAGGAGTATGAAAAAACCGGAGAAGCTAAAGTTATGCCTCTTCCTAGTGCCGATAATCTCACCAATGATGATGTGGTAAGTGCGAGCACTATTACTGTAAAGAAATCTGCTGATGCCGGCAAAGATCAGCCCTCCTCAGGGTCTTCTTCAAATTCAACTTTGTCCTTGCAAATGAAGAAAAAACAACAGCAGGCCCAGCAAGCACAGCAAATATCTGAAGCCCAAAACTTTCTCACGCAAGCATTTCAGCAAGCGATAAAAAAGGAACCGTCAGAAATTAAAACTGAACCTGAGGACGATTTTCATAGAGCAATGGAGTCTCACCACCACAAGATGAATCCACTCAATCTAGAATCTTTAGAGAAACATTCAAACGAAAATCAGTCTGGGTTTGAACAGAAATCGCCTTTAAACTTTCAGCAAACTTTTAGACAAGACTGTCATCGTGATACAGTCGCTTCACCTCCTCTTTCACCAAGTATGAATGATAGACTAAGCATGAACACGTCTGGCAGTCGATCCTCTCCTGAAAACTTGACGTTAACCTCAATCATTGCTTCACAGTTAGGACCGAATGCAAACACGACCTCTCATTCCAATTTGACCACCATGACTGTTAGTACAGCGAACAATATGCTACCACCTAAAATTACCCCTCCAAACTTCACGTCTCCTAGTCAACTTCAGCAATCTCCAACTTCCGTTTCGATACCTCCAGCTACGCGAAGTCTAAGTCCAGCTAGATCTTTAAGCTCCAGCAGTGATTGTTTCAATCCCTCACTTTTATCTGGAGTTGGAGGCAATAGTAACGGTAGCAATTCTTCTAGTGGATCAACTGGTAAACGTGCCAATCGCACACGTTTCACGGACTATCAAATTAAAGTATTGCAAGAATTCTTTGAAAATAATGCATATCCCAAAGATGATGACCTAGAGTATTTGTCAAAATTACTGAGTTTAAGTCCTCGAGTGATTGTTGTTTGGTTCCAAAATGCACGACAAAAAGCTCGGAAAGTTTACGAAAATCAACCACCCGTTGAACTTTCACCTGGTCTTGATGAGACGGGTGCAGGAAGATTTCAGAGAACTCCTGGTCTGAACTACCAGTGTAAAAAGTGTCTGTTAGTTTTCCAAAGGTATTACGAGCTGATCAGGCATCAGAAAACTCACTGTTTCAAAGAGGAGGACGCTAAAAGGTCGGCACAGGCTCAAGCTGCCGCGGCTCAAATCGCGGCGGTTTTGTCGTCGGAGGACTCTAACTCAAGCACGGTCGAGCAGAATCAGCAAGCGCTGCAATTAAGAGAAACTGCGACATCTAGCAATCCTCCAACTCCGGCTGCGCCGACAACTCCTACGCCCTCATTATCAATGTATCCTCCATCGCCAGCTCCACCTAGCACTCCAACTCCTGAAAACAAAGATACCTCTTTCCAATGTGATAACTGTAATTTAGTATTTCCTCGATTTGAATTATGGCGGGAACATCAACTTGTACATATTATGAACCCTAATTTATTTCCCTCCTACCCTCCAGATAGTCCTTTTGGCATTTTGCAACAACACGCTCAAATGCAACAACAACAACAGCAGCAGCAGCAAGAGCAACAACAACAACAGCAACAACAACGAGAACAACAGCAGCAGCACCAACAACAACAACAGCGGGAGCAGCATCAATCACAATCTGCCCCTAGTCAGCAAAGTGTCGTGCCGTCAGATTTGTCCACTAATTCAAGCCCACCTTCACCACACCCTTTTTTATCAATGTTAAATGCCACTAAACGCAAGTTTGAAGAGTATGATTTCATGTGTGACAGAGATGGTGAACAGCCTAAAGACAAGAGGCTTAGAACTACTATTTTACCAGAACAGTTGGATTATCTCTATCAAAAGTATCAAGTCGAGTCCAATCCATCTCGAAAAATGCTTGAAAATATCGCCCGAGAAGTTGGACTAAAAAAACGGGTGGTTCAAGTTTGGTTCCAAAACACGAGAGCGCGCGAGCGTAAGGGTCAGTTCCGAGCACACTCTCAAGTCATAAACAAGAGGTGTCCATTTTGTCCCGCTCTTTTCAAGGTGAAATCGGCTTTGGAATCTCACCTTACCACGAAACACCCGGAGCAGTGCGGTCGAGGTGAAATTAACATCGACTCTTTACCCGATGAAGAACTGAGCATGGAATCCGCGCAATCGTTCCAGACTGCGCAAGCAAATGAAATGAGGGATAAATTCGAGGGGACTCAGAATATGGCCCAGCCAATGTTCCAGGGCGGTGCCGATATTGAAAATTTCAAAAAATACTACGAAGAATCGATGAAAAGGTACATTTCCGAGCTTCAAACGCACCAACAACTTCAAAATGGTGGACCTATGCCAGAAAATCTTAGAAAAGGGGAAGGTGAGACAACAACAACACACGGTGAGTCACCTTTAGATTTGAGCAAGCCTGTTGATTTAAGCCGTCAAATTAGAATGCATTTTGACGAGCGGAATGCTGAAATGAATGACATGAGTGATGACGATAGCATGTCGGAGGCGACTGATTTTATGGATGGTGATGAGAGCAACCCTACATCGCCAGCCTCAAGTACTCAAAGCAATCAGATGAACAAGTCTGGCAGCATGAGCAATTCCAAAAGGTACCGCACTCAGATGACTAGTCTGCAAGTCAAAGTGATGAAATCTCTTTTTGGCGACTATAAAACTCCGACGATGTCCGAGTGCGAGATGTTGGGAAGAGAGATAGGTCTACCAAAGCGTGTCATTCAAGTTTGGTTCCAGAACGCCCGAGCAAAAGACAAGAAATACAAGCTGTCGAGTCACAAAGGGGGTGATGATGCCGACGAAAATCCAAAAACCGCGGAGGATTGCAAGTTTTCGCGTTTGTCACAGAAGGAGTTGAACTCCGGTCATGTCAGCGACGGAGAGTTCACAGTCCCTCCGGCACCCGATGTAGCCGCAATCAATCACAACAACAACAGCACCTCACCAAATCAGCAGCAGTTAGCTCAGTTGCAGATCTTGCAGATGTCTCAAGCCATGGCCCTTGCAGCAGCCAAAGATCCGTCCTCCTTGACTCCTGAGGATGTCGCTCTCCTGCACCAACTTTACGGTCTTGGGCTCCCACAGGGCTTGCCCCTCCATCCGGCCCTCATATCTGCTGCCGAACGAAGATCCTCAGCCTAA
- Protein Sequence
- MADMAYNQALLIQMMTGGQLPPHLPPELAPHMDMGLNPETMEPPPEPADPNPEHLFHCCVCNNFSTDSLEALTHHLAADRTKIREQEILAVVAGHYVCKLCTYKTNLKANFQLHCKTDKHLQRLQHVNHVKEGGPRNEWKLKYLSSPGGVQVRCHACDYYTNSAHKLQLHSAGQRHEVSGLLFRHIRDSDGNVYRCVLCGFSSRARLPLLQHARSMKHLQMEQLHQLQRRSEGKDVHADISEVFQVLNQPSADSDFEQEQKESGSDMGSRGEREEKLDLKDLNSAAAMMQLALEQQILQQKAHEEEQQRSNSEGEHACPYCNYATNSEMRLQAHVLAQHSQSDRPQSAASSCPNSPAKDFLCPLFAKAINVSRPVSLAQRDGPALSGAAPNSTGHHLSPSSIASSGSKDLEKHSETNSRCDPDDRDEPHNLSSSEEQCDNDENRCQACSKNFRNLDELYSHQNESGHLEIKQTPSGPGYLCWKKGCNQYFPSANSLQMHFREIHSSASRNASLSQSSVSTVSISEKHVYKYRCNQCSLAFKTMEKLQLHSQYHLIRDATKCVLCGRSFRSILALHKHVETSHTELSEDELNAYKQSLMNNPLLLAGISGQVLDPSTNELLRKESMKGDSEEMEIDESPSKDSVEDGAQGNDGENSDDSIIYKEQQFLEDYLNSQAIAEDTYNDPNRKYKCHRCKVAFTRQGYLTSHNKTLLHRKGEKLSYPMEKYLDPNRPYKCDVCKESFTQKNILLVHYNSVSHLHKLKRAMQEQQNNNNNNSNNNNNNTAAMSPHAAAVAVAASLGVSPPSSLLLSQKSSLISEDDDKKPFKCNICKVAYTQGSNLDIHLRSVLHQTRASKLQDLALSDQHKKLMQDILSIASSPKQQTSPSPSSGVANQVPSPNQGTNIVPSTAASSATSVPTSLTNSSPTNQTSVIPSTPNKHGMLSCQRCSALFANQDQLNTHQQLYCLFGSPMSMFHPLPTPPHSSANTTLQSPRQTPPPMPLTPFNDEPLTRIIQAKKSSHMYKHLLESFGFDLVMQFNENHQRRQKKEKEESEKLLAELHAVNAANNEQETVVKMEEEVKEQDVSESKEEEEMKQDEETSNSENLPEVSKSTCQHCNKEFSSVWVLKAHCEEVHKDLVPLDFLEKYAHQIKCEYEKKVVPTTTTPPSTTTTSSVMNTPSTISSSAVTSSSPDITPEKEHDDNKEELHAKLSARESQHSSQHENPNPPSTPTAPSTPASSTDSIPPNVSSSTPSNQSGPMPMNLAQQMNEMQAALNAMAASQLQQQLQQFNPMMMGMAGLGMGLPLGLNMPALAAMNLQPPLVPMMMPPPPFEPMVGGQNPLFSPQSDHSSMMSKQQQQFLQQHQQQQAAQATANASQQKRARTRITDDQLKILRAHFDINNSPSEEQIHEMAAQSGLPPKVIKHWFRNTLFKERQRNKDSPYNFNNPPSTTLNLEEYEKTGEAKVMPLPSADNLTNDDVVSASTITVKKSADAGKDQPSSGSSSNSTLSLQMKKKQQQAQQAQQISEAQNFLTQAFQQAIKKEPSEIKTEPEDDFHRAMESHHHKMNPLNLESLEKHSNENQSGFEQKSPLNFQQTFRQDCHRDTVASPPLSPSMNDRLSMNTSGSRSSPENLTLTSIIASQLGPNANTTSHSNLTTMTVSTANNMLPPKITPPNFTSPSQLQQSPTSVSIPPATRSLSPARSLSSSSDCFNPSLLSGVGGNSNGSNSSSGSTGKRANRTRFTDYQIKVLQEFFENNAYPKDDDLEYLSKLLSLSPRVIVVWFQNARQKARKVYENQPPVELSPGLDETGAGRFQRTPGLNYQCKKCLLVFQRYYELIRHQKTHCFKEEDAKRSAQAQAAAAQIAAVLSSEDSNSSTVEQNQQALQLRETATSSNPPTPAAPTTPTPSLSMYPPSPAPPSTPTPENKDTSFQCDNCNLVFPRFELWREHQLVHIMNPNLFPSYPPDSPFGILQQHAQMQQQQQQQQQEQQQQQQQQREQQQQHQQQQQREQHQSQSAPSQQSVVPSDLSTNSSPPSPHPFLSMLNATKRKFEEYDFMCDRDGEQPKDKRLRTTILPEQLDYLYQKYQVESNPSRKMLENIAREVGLKKRVVQVWFQNTRARERKGQFRAHSQVINKRCPFCPALFKVKSALESHLTTKHPEQCGRGEINIDSLPDEELSMESAQSFQTAQANEMRDKFEGTQNMAQPMFQGGADIENFKKYYEESMKRYISELQTHQQLQNGGPMPENLRKGEGETTTTHGESPLDLSKPVDLSRQIRMHFDERNAEMNDMSDDDSMSEATDFMDGDESNPTSPASSTQSNQMNKSGSMSNSKRYRTQMTSLQVKVMKSLFGDYKTPTMSECEMLGREIGLPKRVIQVWFQNARAKDKKYKLSSHKGGDDADENPKTAEDCKFSRLSQKELNSGHVSDGEFTVPPAPDVAAINHNNNSTSPNQQQLAQLQILQMSQAMALAAAKDPSSLTPEDVALLHQLYGLGLPQGLPLHPALISAAERRSSA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01478052;
- 90% Identity
- iTF_01478052;
- 80% Identity
- iTF_01478052;