Basic Information

Insect: Trialeurodes vaporariorum
Gene Symbol: ZNF236
Assembly: GCA_011764245.1
Location: HIC:29688662-29716576[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00039 0.027 15.0 0.7 1 23 45 68 45 68 0.97

2 16 8.2e-08 5.5e-06 26.5 2.3 1 23 159 181 159 181 0.98

3 16 1.7e-05 0.0011 19.3 2.1 1 23 187 209 187 209 0.99

4 16 0.00014 0.0098 16.3 1.7 1 23 215 238 215 238 0.96

5 16 8.5e-06 0.00058 20.2 7.9 1 23 321 343 321 343 0.97

6 16 1.2e-05 0.00079 19.8 1.5 1 23 349 371 349 371 0.98

7 16 1.5e-06 9.9e-05 22.6 2.4 1 23 377 399 377 399 0.96

8 16 0.00079 0.053 14.0 0.1 2 23 603 625 602 625 0.95

9 16 0.0037 0.25 11.9 0.1 1 21 712 732 712 733 0.94

10 16 5.1e-08 3.4e-06 27.2 2.3 1 23 823 845 823 845 0.98

11 16 0.023 1.5 9.4 8.3 1 23 851 873 851 873 0.99

12 16 3.1e-07 2.1e-05 24.7 0.9 1 23 880 902 880 902 0.98

13 16 2.9e-05 0.002 18.5 2.3 1 23 908 930 908 930 0.97

14 16 2.7e-07 1.9e-05 24.9 4.2 1 23 1003 1025 1003 1025 0.98

15 16 2.3e-05 0.0016 18.8 1.3 1 23 1031 1053 1031 1053 0.98

16 16 7.1e-07 4.8e-05 23.6 0.4 2 23 1060 1082 1059 1082 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00039	0.027	15.0	0.7	1	23	45	68	45	68	0.97
2	16	8.2e-08	5.5e-06	26.5	2.3	1	23	159	181	159	181	0.98
3	16	1.7e-05	0.0011	19.3	2.1	1	23	187	209	187	209	0.99
4	16	0.00014	0.0098	16.3	1.7	1	23	215	238	215	238	0.96
5	16	8.5e-06	0.00058	20.2	7.9	1	23	321	343	321	343	0.97
6	16	1.2e-05	0.00079	19.8	1.5	1	23	349	371	349	371	0.98
7	16	1.5e-06	9.9e-05	22.6	2.4	1	23	377	399	377	399	0.96
8	16	0.00079	0.053	14.0	0.1	2	23	603	625	602	625	0.95
9	16	0.0037	0.25	11.9	0.1	1	21	712	732	712	733	0.94
10	16	5.1e-08	3.4e-06	27.2	2.3	1	23	823	845	823	845	0.98
11	16	0.023	1.5	9.4	8.3	1	23	851	873	851	873	0.99
12	16	3.1e-07	2.1e-05	24.7	0.9	1	23	880	902	880	902	0.98
13	16	2.9e-05	0.002	18.5	2.3	1	23	908	930	908	930	0.97
14	16	2.7e-07	1.9e-05	24.9	4.2	1	23	1003	1025	1003	1025	0.98
15	16	2.3e-05	0.0016	18.8	1.3	1	23	1031	1053	1031	1053	0.98
16	16	7.1e-07	4.8e-05	23.6	0.4	2	23	1060	1082	1059	1082	0.96

Sequence Information

Coding Sequence: ATGAGTAGAACGCAAGGATCTGAGCTCTTTAGCGGTAGAAACAACAAGGACAAGCTACTTAAGTCTACCTTAAGTAATTTACGGTGCCATGTTCTACGATTACATTCTATACCCCACACGGAAGAAACCACTTTTGAGTGTGACCAGTGTTCCTGTGTCTTCAGAAAAATTGGCAGTCTGAATGCTCATATCAACCGAGCTCATAAAAATTCAAAAAGTGATGAAAGTGTTCCTCCACGCACTACTAGCCGCACACTTAAAAATTCTAGAAGTGATAAGGAGAAGTTCAAAATATTAAGGAATGTTAATGGCGTGATGGAAGAAACCTCTTTAGATGTTTCTGAAAGCGGTAATGAAGGAAAATCTGGTGATGATTCGCTGAGTGAAGTAACTATTCTCTCACAAAAAGTCGATGCCAACAGTGCAACTGAAGTTCATAAAGTCACTCAAAGACGAGTTGGTTCCATGAGATGGCATCAGTGTCCATATTGTCGTAAAGAGTTCAAGAAACCATCAGATCTCATTAGGCATATTCGGACGCATACGCAAGAAAAACCATTCAAATGTTGTGTGTGTGGACGAGGATTCGCTGTCAGATCAACGTTGAGCACCCATCTACGAACCCATTCTGGTCTGAAAAACCATGTTTGCACTCTTTGTAATCGGGCTTATTCAAATCCTCGGTCCCTTAAAATGCATTTACAATCTTATCATTTTAAGGTGGTTGACTGGCGTGAACCTGATCCGGCTCCCCCCAAAAACGATCAGAAATCATCTGAAGATACTTGCAAAAATCTGAAAGCTAATAAACATCAAATAAATGCAATTGACCTCAATAACCTTCCAATTAAAATATTAGGTAGCGCATCCACCCCTGATGAACCTTACTGTTTGATCGGAGCAGGATCTGCGAAGCCAGGGTCCAAGAAGGTTTCATCTGCAGATTTTATGCAGAGGCATCATAGTTGCACAATATGTAACTATAGATTCACCAAGTCTTCCCATTTGAAAACGCATATGAGGAGACACACCGGCGAAAAACCTTATGTGTGTCACGTTTGCAACAAATCTTTTTCAACAAATGGAATTCTGAGAGTGCATCGTAGGGTACATTCAGGGATCAAGTCTCATACTTGTGATGACTGTGGAAAACATTTCTCTACCAAAGGGAGTCTGAGGCGTCACGCTGCTATTCACAGCGAACACGACTCATTTGCCTGTCCTCACTGTCATAAAATGTACAAATGTCTTGCAAGCTGCAAAAAGCACATGTTAAGGCATCTAAAAGGAAAGAATACCACTAGTCCAGTAAAAACCGAATGCATCCAACAAACCAAACCTCCAGAGTATACTGAAGATGTTGTCTGTAGTTTGTCAGATCCCTTGACGGCTGATGACATTTCATATGGTACTGTTGGTGCTTCATTCACTATTCTTCAAGAGGAACCTGAAAAAGTTGAAGAAGAAATTGTTTATGCAGAAACCAATGAGAAAGATAGTCACGTTCTCTTGTCCGACACGGTACAAACGTATTCTCAGGAAACCATGCAAATTCAAGATATTGAAGAGACTTTGAGTCAACAACTTTTTGGCGGAACTGTAGGCACTGTTACCCTTGAGAAAGATCCCACGACTTGTCAGACTGTAATCAATTTCGATCGATCGTTTGACAACTGCGTTTTTTCATCTATAGAAATTCCGAATGATGCTCTGGTTGAAGGTTTGAATCAAGTTATCGCTACGTCATCGGAATCCCTTGTAACCAGTGTACCCATAGTGACGCACAATCTGAAAATTGAAGTATCCAGCTGTGAAGATTGTGATCTTTCATTTGGTAGCAGCATGGAGCTGGAGTCCCATAGATTGATGATTCACTCCCGTATTAGTTCAACTGTTCCAACCCTTCCTCCTGTTACATCCGTAATATCGGATACTCAACCAACCTTAACTCAGTCTGTCTCTAAACCTAGATCTAGTCAACTTAAGTCGAAAGGCAATCAGAAAAGGAAAATTTTACCAGCAAGGAGTCAGAGGCAGCGGATTGCGAAATCAACTGGTGACCGCCAAATGAAGCAGGTTGAGTCCATTGATTTGGACAAAGAGTCTGTTGATGATGATGTTTTAAATCTGACCTTTGAGTGTCCTGTTTGTCATGTTCTGTTTTCCTCAGAAAGCGCTTACCAGACTCATCTGGAGACAGCTGATGATGAGCAACATATAATTATGATACCTGACGATGAATTGAACAATCACATAACCCTTGTAGGAGCTCATAAGAAAACAAGGTGGAAAAGAGGTGTGGCAAGAGTTTTGACAGCAGACGAACAGAAAGAACTCTCAAAAGTTCAGCCAGAAAAATGTGCATCCGTTTCTGAAAAGGTCTTGATCTCATTGGTCGCCGAAAAAGATAGAGTCAACGATATCAAGGCCCCCGAGGAATCATTTGTGAAAGAGCCCCTTTTCCAACATCAGTGCAAGTACTGCCCTAAAAGCTTTCGAAAGCCAAGCGATCTTATCAGGCATCTTAGGATCCATACTGGAGAGAGACCTTTCCAATGTCAGACCTGCTTCAAATGTTTCACTGTCAAGTCAACTCTTGAATGTCATCTGAAAACGCACAATGTGGGGAAAAAACATTTCTCCTGCCATGTTTGTGGTTATCCATTCGCCACTAAGGGCAGTTTAAAAGTTCATATGAGACTTCACACAGGAGCCATGCCTTTTCGATGTCCAATTTGTGGCCAGCGTTTCCGAACGTCGGGTCACCGCAAAACACATTTACTCCTCCACATGAAAAACGAAAAGAAGGAAATGCTGAATTTAAGTGAAAATTTACTTAATGGTACTTCCATTCAAACAGGCTCAAACGATCAAGATGTTGTTGACACAGTTGTCTCCTCAAACACTGTTGTCATGTCGAAAGACTCGCTCGTGGTCAAAAATACCAATCCAAATGACGGGACGGACGAAAATTCCATGGATGACAGTGTTTCGGTTTTAATTTTCCACACATGTCGAGAATGTGGTAAATCATTCAAAAAGAAGAGCCAGCTTACGCGTCATGTTAGAATCCATACAGGCGAGCGCCCATTTGAGTGCACGCAGTGCTCGAAAGCATTCAATCAGAAAAACGCTCTAATGATGCATTTGAAACGCCACACTGGTGAGAAACCATGGTCTTGCTCGGAATGTGGGGCTTCGTTTACTCAGAAAGGAAATTTAATCACACACATGAAGAGGAATCACAAGCATCTTGCTAATGATCCGCTAACACTTAAAAAAATTGATCCTTTGGGGGAAATTCAAGAACCTAGATCTCCGTTGCCAGTTTCAATCACGTTAGATTTGACTGATAAAAACTTTGACTTGGAGCGAGTTGTGAGAGATTTGTTCCCGCAAATGAAGCATAGTACATCCTTGAGCTCATCCGCATCCCTTAACTAAACACCTCTCAATTGAAGAATTGTTTTAATAATTCTTTATTTTGTGTTTAAATGCAATAGGCTGTTTGAGCCTAAGAATGAATGAATTTATAACTGGCTATGGCTCCAAGCAAAAGAAAG
Protein Sequence: MSRTQGSELFSGRNNKDKLLKSTLSNLRCHVLRLHSIPHTEETTFECDQCSCVFRKIGSLNAHINRAHKNSKSDESVPPRTTSRTLKNSRSDKEKFKILRNVNGVMEETSLDVSESGNEGKSGDDSLSEVTILSQKVDANSATEVHKVTQRRVGSMRWHQCPYCRKEFKKPSDLIRHIRTHTQEKPFKCCVCGRGFAVRSTLSTHLRTHSGLKNHVCTLCNRAYSNPRSLKMHLQSYHFKVVDWREPDPAPPKNDQKSSEDTCKNLKANKHQINAIDLNNLPIKILGSASTPDEPYCLIGAGSAKPGSKKVSSADFMQRHHSCTICNYRFTKSSHLKTHMRRHTGEKPYVCHVCNKSFSTNGILRVHRRVHSGIKSHTCDDCGKHFSTKGSLRRHAAIHSEHDSFACPHCHKMYKCLASCKKHMLRHLKGKNTTSPVKTECIQQTKPPEYTEDVVCSLSDPLTADDISYGTVGASFTILQEEPEKVEEEIVYAETNEKDSHVLLSDTVQTYSQETMQIQDIEETLSQQLFGGTVGTVTLEKDPTTCQTVINFDRSFDNCVFSSIEIPNDALVEGLNQVIATSSESLVTSVPIVTHNLKIEVSSCEDCDLSFGSSMELESHRLMIHSRISSTVPTLPPVTSVISDTQPTLTQSVSKPRSSQLKSKGNQKRKILPARSQRQRIAKSTGDRQMKQVESIDLDKESVDDDVLNLTFECPVCHVLFSSESAYQTHLETADDEQHIIMIPDDELNNHITLVGAHKKTRWKRGVARVLTADEQKELSKVQPEKCASVSEKVLISLVAEKDRVNDIKAPEESFVKEPLFQHQCKYCPKSFRKPSDLIRHLRIHTGERPFQCQTCFKCFTVKSTLECHLKTHNVGKKHFSCHVCGYPFATKGSLKVHMRLHTGAMPFRCPICGQRFRTSGHRKTHLLLHMKNEKKEMLNLSENLLNGTSIQTGSNDQDVVDTVVSSNTVVMSKDSLVVKNTNPNDGTDENSMDDSVSVLIFHTCRECGKSFKKKSQLTRHVRIHTGERPFECTQCSKAFNQKNALMMHLKRHTGEKPWSCSECGASFTQKGNLITHMKRNHKHLANDPLTLKKIDPLGEIQEPRSPLPVSITLDLTDKNFDLERVVRDLFPQMKHSTSLSSSASLN*TPLN*RIVLIILYFVFKCNRLFEPKNE*IYNWLWLQAKE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -