Tvap014582.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Trialeurodes vaporariorum
Gene Symbol
-
Assembly
GCA_011764245.1
Location
HIC:52241669-52246503[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 34 0.013 0.88 10.2 5.9 1 22 245 266 245 270 0.93
2 34 1.6e-07 1.1e-05 25.6 4.1 1 23 296 318 296 318 0.99
3 34 2.1e-05 0.0014 19.0 2.4 1 23 324 346 324 346 0.98
4 34 1.2e-05 0.00082 19.7 1.3 1 23 352 374 352 374 0.98
5 34 2.5e-07 1.7e-05 25.0 2.4 1 23 380 402 380 402 0.99
6 34 1.4e-05 0.00093 19.6 2.6 1 23 408 430 408 430 0.99
7 34 3.2e-06 0.00022 21.5 2.6 3 23 438 458 436 458 0.98
8 34 8.8e-06 0.0006 20.2 2.3 2 23 465 486 464 486 0.98
9 34 0.00031 0.021 15.3 0.4 3 23 494 514 492 514 0.98
10 34 1.2e-05 0.00078 19.8 8.3 1 23 520 542 520 542 0.99
11 34 0.00022 0.015 15.8 0.9 1 23 548 570 548 570 0.98
12 34 8.8e-05 0.006 17.0 1.6 1 22 651 672 651 672 0.96
13 34 0.39 27 5.5 0.1 11 23 689 701 685 701 0.88
14 34 1.5e-07 1e-05 25.7 3.7 1 23 707 729 707 729 0.99
15 34 1.1e-05 0.00078 19.8 4.6 1 23 735 757 735 757 0.98
16 34 1.9e-06 0.00013 22.2 4.8 1 23 763 785 763 785 0.98
17 34 0.00022 0.015 15.8 3.9 1 23 791 813 791 813 0.99
18 34 1.2e-06 8.1e-05 22.9 3.6 1 23 819 841 819 841 0.99
19 34 8.9e-07 6e-05 23.3 2.6 1 23 847 869 847 869 0.99
20 34 0.00031 0.021 15.3 0.4 3 23 877 897 875 897 0.98
21 34 1.2e-05 0.00078 19.8 8.3 1 23 903 925 903 925 0.99
22 34 0.00022 0.015 15.8 0.9 1 23 931 953 931 953 0.98
23 34 0.00026 0.018 15.5 1.2 1 22 1034 1055 1034 1055 0.96
24 34 0.39 27 5.5 0.1 11 23 1072 1084 1068 1084 0.88
25 34 2.7e-06 0.00018 21.8 0.5 1 23 1090 1112 1090 1112 0.97
26 34 3.2e-06 0.00022 21.5 3.5 1 23 1118 1140 1118 1140 0.98
27 34 1.2e-05 0.00082 19.7 1.3 1 23 1146 1168 1146 1168 0.98
28 34 3.4e-07 2.3e-05 24.6 3.9 1 23 1174 1196 1174 1196 0.99
29 34 2.2e-05 0.0015 18.9 3.1 1 23 1202 1224 1202 1224 0.99
30 34 3e-06 0.0002 21.6 3.2 1 23 1230 1252 1230 1252 0.99
31 34 0.00031 0.021 15.3 1.6 3 23 1260 1280 1258 1280 0.98
32 34 2.1e-06 0.00015 22.1 1.3 1 23 1286 1308 1286 1308 0.98
33 34 0.00039 0.026 15.0 1.2 1 23 1314 1336 1314 1336 0.98
34 34 0.048 3.2 8.4 0.0 4 22 1471 1489 1471 1489 0.95

Sequence Information

Coding Sequence
ATGGAAGATATACATTCATTCAAAGAAGAGAGCAGTCTAAAAAATTCTGAATCTTATTCTGACCACCTTTGCAGTAGCAAGAATCACCATGAGACTGCATCTTCTGAGTTTTCTAATGTCCATGATACTCAAGCTGAACCAATAAAAACGAAGTATTATCTAATCGTTAACGAAGACACAGGAGAAGTGTCTGACTTCAACCCTAATCAAGATGATAAGATGTCTTACTTGACAGAAAGAGATGTGAAGGATATTGAACTCAGCGATGTTCAGTTCTTATCGACAAGCGTGAAATTAGAAACAGATCAGAACGGAGGAATGAGCATCACTAAGCAAGTCAGTAATAATTTCACAAGTTGGCAGAAGGAGGAAGAAAATGATGACCTCTTTGATGAAAAAGAGAAAATGAATGAGACATTAGGGATGCATCCTGAGATTACACAAGGTTATTCGGATGGACCCATAAAATCAGAGCCTAGTTCTATGAGTGAGGATGCTATTGAAGATACGTCAGAGATCAAGGGAGAAATCTTACATGAATCAACCAATGGAGAGGACACGTTGAGCACTTCCGCAGCCAGCCTTGAGCTATTGAAGAGAAATCAACAATCGGCACATCCTATGATGTCCGACTCAGAGAAATTTTTTTTTACCTTTGTAGACTGTTCAGCAAGACATGCTTCAGAGGTTGAATTAAAAAAATATCAAAGATATCACATTAGCAAAGAACATTTTGTATGCACTCACTGCAATTCAGATTTTTCTAACCAACGCACTCTGAGAAAACATGGCAGAACATGTAACAAACACAATATCTTCCCATGCTCTATCGATGATGCCAAATTCGGTCCTCAAAGCTCTTTGGAATATACTGGGGTTAAAACCTTTAAATGCACTCACTGTGATGCAAAATTTTCTGATAGAAGCAATCTTAATAGGCACATAAGAAGACATACTGGGGAAAAACCCTTTGAATGCTCTCACTGTGATAAAAAATTTCCTGGTAAAACAACTCTTATCGAGCACACCAGAACACATACTGGGGAAAACCCCTTTGAATGCACTCACTGTGGAGCAAAATTTTCTGCGAAAGGCCTGCTTAAGACGCATATAAGATCGCATACCGGGGAAAAACCCTTTCAATGCTCTCACTGTGGAGCAAAATTTTCTCAGTCCGGCAATCTTAAAACTCATATTAGATCACATACAGGGGAAAAACCCTATAAATGCACTTACTGTGTTGCAAAGTTTACTGTGAATGACCATCTGATTAGGCACCTTAGAACACATACCGGGGAAAAACCCTTCGGATGCTCTCACTGTGATAAAAAATTTCCTGATAAAACAACTCTTATCAAGCACATCAGAACACATACTGGGGAAAAACCAATTAAATGCACTCACTGTGATAAAACATTTGCTGTTAAAAGGTATCTTACTGGGCACATAAGAACACATACAGGGAAAAAACCCTTTGGATGCACTGATTGTGAAGCAAAATATTCTGAGAAAAGAAGTCTCACAGCACACATCAGAACACATACAGGGGAAAAACCCTTCAAATGCACTCACTGTAATGCAAAATTTTCTCACAAAAGCAATTTTAACAAGCATATCAGGTCACATACTGAGGAAAAATCCTTTACGTGCACGCAGTGTGATGCAAAATTTTCTCTCAAAAGCACTCTCAATGGGCACCTCAAAATACATACTGGGGAAAAACCCTTCGCACCCTCACTCCGAGAAATCTTACATGATTCAACCAATGGAGAGGACACGTTGAGCACTTCCGCAGCCAGCCTTGAGCTATTGAAGAGAAATCAACAATCGGCACATCATATGATGTCCGACACAGAGAAAATTGTTTTTACCTTTGTAGACAGTTCAGCAAGACATGCTTCAGAGGAAGAATGGAAAAAAGATCAAAAGAATCTCATTAGCAAAGAACATTTTGTATGCACTCACTGCAATTCAGATTTTTCCAACCAAAGTACTCTGAGAAGACATGCCAGAACATGTATCGAACGTAATCTCTTTCCATGCTCTATCGATGATGCAAAAGTCAGTCCACAAAGCTCTTTGAAATCCCACATTAGGACACATACTGGGGTAAAAACCTTTAAATGCACTCACTGTGATACAAAATTTGAAAGGAAAAGCAATTTGAAAGCGCACATCAGAATACATACTGGGGAAAAACCCTTTGAATGCTCTCACTGTGATGCAAAATTTTCTGTTAGAAGCCATCTTAAGACGCATATAAGATCGCATACCGGGGAAAAACCCTTTCATTGCTCTCACTGTGGAGCAAAATTTTCTCAGTCAAGTAATCTTAACACTCATATTAGATCACATACAGGGGAAAAACCCTATAAATGCACTCACTGCGTTGCAAAGTTTACTGTGAAAGGCCATCTGATTATGCACCTCAGAACACATACCGGGGAAAAACCCTTCGAATGCTCTCACTGTGATAAAAAATTTAGTGGTAAAACAACTCTTATCAAGCACATCAGAACACATACTGGGGAAAAACCCTTTAAATGCACTCACTGTGATAAATCATTTGCTATTAAAAGGAATCTCATTGAGCACATAAGAACACATACCAGGAAAAAACCCTTTGGATGCACTGATTGTGAAGCAAAATATTCTGAGAAAAGAAGTCTCACAGCACACATCAGAACACATACAGGGGAAAAACCCTTTAAATGCACTCACTGTAATGCAAAATTTTCTCACAAAAGCAATTTTAACAAGCATATCAGGTCACATACTGAGGAAAAATCCTTTACGTGCACGCAGTGTGATGCAAAATTTTCTCTCAAAAGCACTCTCAATGGGCACCTCAAAATACATACTGGGGAAAAACCCTTCGCACCCTCACTCCGAGAAATCTTACATGATTCAACCAATGGAGAGGACACGTTGAGCACTTCCGCAGCCAGCCTTGAGCTATTGAAGAGAAATCAACAATCGGCACATCATATGATGTCCGACACAGAGAAAATTGTTTTTACCTTTGTAGACAGTTCAGCAAGACATGCTTCAGAGGATGAATTCAAAAAAGATCAAAGAAATCACATCAGAAAAGAACATTTTGTATGCACTCACTGTAATTCAGATTTTTCCAACGAAAGTACTTTGAGAAGACATGCCAGAACATGTAACAAACGTAATATCTTTCCATGCTCTATCGATGATGCAAAAGTCAGTCCACAAAGCTCTTTGAAATCCCACATTAGGACACATACTGGGGAAAAACCCTTTGCATGCCCTCACTGTGTTGCAAAATTTGAAAGGAAAAGCAATTTGAACGCGCACATCAGAATACATACTGGGGAAAAACCCTTTGAATGCTCTCACTGTGATGCAAAATTTTCTGGTAGAAGCCATCTTAATAGGCACATCAGAATACATACTGGGGAAAAACCCTTTGAATGCACTCACTGTGGAGCAAAATTTTCTGCGAAAGGCCTGCTTAAGACGCATATAAGATCGCATACCGGGGAAAAACCCTTTCAATGCTCTCACTGTGGAGCAAAATTTTCTCACTCAAGCAATCTTAACGTTCATATTAGATCACATACAGGGGAAAAACCCTATAAATGCACTTACTGTGTTGCAAAGTTTACTATGAATGACCATCTGATTAGGCACCTCAGAACACATACTGGGGAAAAACCCTTTAAATGCACTCACTGTGATAAAACATTTGCTATTAAAAGGAATCTTACTGGGCACATAAGAACACATACCCGGAAAAAACCCTTTGGATGCACTGATTGTGAAGCATCATATTCTCATAAAAAAAGTCTCAATTCACACATCAGAGAACATACAGGGGAAAAACGCTTTGAATGCACTTACTGTAATGCAAAATTTGCTCTCAAAAGCAATTTGAACAAGCACATCAGGTCACATACTGAGGAAAAATCCTTTACGTGCACGCAGTGTAATGCAAAATTTTCTCTCAAAAGCACTCTCAATGGGCACCTCAAAATACATACTGGGGGAAAAACCCTTCACACTCCCACTGGGACAGCCGTTGTGCAAAATCTAGTCCAAGAAGCTCTTTGAAATCCAATAATAGGACAAATAATGTTGGGGACATGTTTACCTGTGCTCATTGCAATGCAAAGTGGTCATCCAAAAGCGGACTCATCAGGCATATTAGTCCTCACTCTGATGAAAAAAAATAAAAATTAGATGTCCTCGCTTTGATGAAAAAGAATTTATATGCCCTCACTCTGAAGCAAAATTTTCTGATTAACGCAAATTTTACAAAAACATGAGGATTTCTCACGGGGAAACACCCTTTCTATGCTCTCACTCTGGAGCAAAATTTTCTCATACAGCCCATCTCACCTGGCACATCAGAAAACATACGGGGCAAAAACCCTTTAAATTCCTCACTGTAATGCAACATTATCTCAGAAAAGCGCTCTTATTTGGCACCTCAGAACACTTACCGAGAAAAACCCTGGGCATGCTATCACTGCGACAGAAAATTTTCTCTTAAAGGTACTCCAAACGACCATATTATTTATTTATCTATTTATTTATTTATTTTTATTTTGGTTCATAAATGCCCTAAGAGGTAAACAGAGCTGGTACAGGTCAGTTTAAGAACAATAGTCTAAACTATAGGTGTACAAAATGTGCCATAGGTTTTACAGGAGGAGGGAAACAAGAAATTGTTTCTACAATATTAATTCATTAAAATTGTATAAAGCTTTATGTAACAGAAAATTCTCCTATTCTTATTATTAGAACACATATCGGGGAAAAACCCTTTGAATGCACTCATTGTGGAGCAAAATTTTCTCATAAAG
Protein Sequence
MEDIHSFKEESSLKNSESYSDHLCSSKNHHETASSEFSNVHDTQAEPIKTKYYLIVNEDTGEVSDFNPNQDDKMSYLTERDVKDIELSDVQFLSTSVKLETDQNGGMSITKQVSNNFTSWQKEEENDDLFDEKEKMNETLGMHPEITQGYSDGPIKSEPSSMSEDAIEDTSEIKGEILHESTNGEDTLSTSAASLELLKRNQQSAHPMMSDSEKFFFTFVDCSARHASEVELKKYQRYHISKEHFVCTHCNSDFSNQRTLRKHGRTCNKHNIFPCSIDDAKFGPQSSLEYTGVKTFKCTHCDAKFSDRSNLNRHIRRHTGEKPFECSHCDKKFPGKTTLIEHTRTHTGENPFECTHCGAKFSAKGLLKTHIRSHTGEKPFQCSHCGAKFSQSGNLKTHIRSHTGEKPYKCTYCVAKFTVNDHLIRHLRTHTGEKPFGCSHCDKKFPDKTTLIKHIRTHTGEKPIKCTHCDKTFAVKRYLTGHIRTHTGKKPFGCTDCEAKYSEKRSLTAHIRTHTGEKPFKCTHCNAKFSHKSNFNKHIRSHTEEKSFTCTQCDAKFSLKSTLNGHLKIHTGEKPFAPSLREILHDSTNGEDTLSTSAASLELLKRNQQSAHHMMSDTEKIVFTFVDSSARHASEEEWKKDQKNLISKEHFVCTHCNSDFSNQSTLRRHARTCIERNLFPCSIDDAKVSPQSSLKSHIRTHTGVKTFKCTHCDTKFERKSNLKAHIRIHTGEKPFECSHCDAKFSVRSHLKTHIRSHTGEKPFHCSHCGAKFSQSSNLNTHIRSHTGEKPYKCTHCVAKFTVKGHLIMHLRTHTGEKPFECSHCDKKFSGKTTLIKHIRTHTGEKPFKCTHCDKSFAIKRNLIEHIRTHTRKKPFGCTDCEAKYSEKRSLTAHIRTHTGEKPFKCTHCNAKFSHKSNFNKHIRSHTEEKSFTCTQCDAKFSLKSTLNGHLKIHTGEKPFAPSLREILHDSTNGEDTLSTSAASLELLKRNQQSAHHMMSDTEKIVFTFVDSSARHASEDEFKKDQRNHIRKEHFVCTHCNSDFSNESTLRRHARTCNKRNIFPCSIDDAKVSPQSSLKSHIRTHTGEKPFACPHCVAKFERKSNLNAHIRIHTGEKPFECSHCDAKFSGRSHLNRHIRIHTGEKPFECTHCGAKFSAKGLLKTHIRSHTGEKPFQCSHCGAKFSHSSNLNVHIRSHTGEKPYKCTYCVAKFTMNDHLIRHLRTHTGEKPFKCTHCDKTFAIKRNLTGHIRTHTRKKPFGCTDCEASYSHKKSLNSHIREHTGEKRFECTYCNAKFALKSNLNKHIRSHTEEKSFTCTQCNAKFSLKSTLNGHLKIHTGGKTLHTPTGTAVVQNLVQEAL*NPIIGQIMLGTCLPVLIAMQSGHPKADSSGILVLTLMKKNKN*MSSL**KRIYMPSL*SKIF*LTQILQKHEDFSRGNTLSMLSLWSKIFSYSPSHLAHQKTYGAKTL*IPHCNATLSQKSALIWHLRTLTEKNPGHAITATENFLLKVLQTTILFIYLFIYLFLFWFINALRGKQSWYRSV*EQ*SKL*VYKMCHRFYRRRETRNCFYNINSLKLYKALCNRKFSYSYY*NTYRGKTL*MHSLWSKIFS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-