Tvap014984.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Trialeurodes vaporariorum
Gene Symbol
-
Assembly
GCA_011764245.1
Location
HIC:14677822-14681685[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 36 7.8e-07 5.3e-05 23.5 3.3 1 23 264 286 264 286 0.99
2 36 3.9e-07 2.6e-05 24.4 2.2 1 23 292 314 292 314 0.99
3 36 3.5e-06 0.00024 21.4 5.5 1 23 320 342 320 342 0.99
4 36 2.2e-05 0.0015 18.9 4.6 1 23 348 370 348 370 0.99
5 36 2.8e-05 0.0019 18.6 1.2 1 23 376 398 376 398 0.99
6 36 2.1e-05 0.0014 18.9 5.3 1 23 404 426 404 426 0.98
7 36 3.3e-06 0.00022 21.5 3.3 1 23 432 454 432 454 0.99
8 36 3.5e-06 0.00024 21.4 5.5 1 23 460 482 460 482 0.99
9 36 0.00026 0.018 15.5 3.5 1 23 488 510 488 510 0.99
10 36 2.3e-06 0.00015 22.0 4.0 1 23 516 538 516 538 0.99
11 36 8.9e-06 0.00061 20.1 4.5 1 23 544 566 544 566 0.99
12 36 4.6e-06 0.00031 21.0 5.7 1 23 572 594 572 594 0.99
13 36 9.5e-05 0.0065 16.9 4.3 1 23 600 622 600 622 0.99
14 36 2.9e-06 0.0002 21.7 6.7 1 23 628 650 628 650 0.99
15 36 3.5e-06 0.00024 21.4 5.5 1 23 656 678 656 678 0.99
16 36 0.00026 0.018 15.5 3.5 1 23 684 706 684 706 0.99
17 36 2.3e-06 0.00015 22.0 4.1 1 23 712 734 712 734 0.99
18 36 0.0022 0.15 12.6 5.2 1 23 740 762 740 762 0.99
19 36 9.5e-07 6.4e-05 23.2 3.2 1 23 768 790 768 790 0.99
20 36 1e-06 6.8e-05 23.1 3.0 1 23 796 818 796 818 0.99
21 36 8.8e-07 6e-05 23.3 2.8 1 23 824 846 824 846 0.99
22 36 0.00026 0.018 15.5 3.5 1 23 852 874 852 874 0.99
23 36 2.3e-06 0.00015 22.0 4.0 1 23 880 902 880 902 0.99
24 36 8.9e-06 0.00061 20.1 4.5 1 23 908 930 908 930 0.99
25 36 4.6e-06 0.00031 21.0 5.7 1 23 936 958 936 958 0.99
26 36 9.5e-05 0.0065 16.9 4.3 1 23 964 986 964 986 0.99
27 36 2.9e-06 0.0002 21.7 6.7 1 23 992 1014 992 1014 0.99
28 36 3.5e-06 0.00024 21.4 5.5 1 23 1020 1042 1020 1042 0.99
29 36 0.00026 0.018 15.5 3.5 1 23 1048 1070 1048 1070 0.99
30 36 2.3e-06 0.00015 22.0 4.1 1 23 1076 1098 1076 1098 0.99
31 36 0.0022 0.15 12.6 5.2 1 23 1104 1126 1104 1126 0.99
32 36 9.5e-07 6.4e-05 23.2 3.2 1 23 1132 1154 1132 1154 0.99
33 36 1e-06 6.8e-05 23.1 3.0 1 23 1160 1182 1160 1182 0.99
34 36 1.6e-06 0.00011 22.5 1.3 1 23 1188 1210 1188 1210 0.99
35 36 0.1 7.1 7.3 0.9 10 23 1218 1231 1215 1231 0.92
36 36 0.3 20 5.9 0.6 9 23 1245 1259 1244 1259 0.95

Sequence Information

Coding Sequence
ATGGAAGGTAATTCTGTTGACAAATTTTGTTTTGTTGGCGATTCTAATCGCTCAACAGATGATAAAGAACCTTCACCAACTTCAAATATCTTAGCATCCAACTTTTTTCCTGAGTTTACAATAAAGACAGAGAAGGAACCTCTCTATGAAGAGGATGCTGAAACAACAGGACACCCAGTTAACCAGCCAAAGCTAGCTAACAGTTTAACAGAATGTTGTAAGACAGATGAAAAAGAAATAGAATTGGGGAGTATTCGCTTCTTGTCTGTGAGTGTAAAATTAGAAAAAGACTGGAACCAACCTGAAGGAATGCTTGCTTCTTCAAACAATATCTCTGTGGATATGAGAAAACAGGAAGCAAACTGTATGACCAATGGCTACATTGAAAACCACAACTTCTCCCAAGTGTCTCAGTATGTGGCAATCGATCCTATTTGTGATAAGTCAATAAAACGGGAGGGAAGATTTAGTCCTGAAAATGACATTGAAACTGTGGTAGAATTCAAGGAAGAAACTATTTTCCATCAGACAAATGAAGTTATCAAACCGATGAAAGACTCTGATGGTACAAACTCCGCATCAATCTGTTTAAATGGAAAACAGCAAAGCGAATTGCATGAACTTGGACCAATAATCAAAGTAGACGTTTCCAACAATGTAAGTGCATCACAACAAGAAGGAATTAGAAAAAATGGAACAGAACCGATTGCATCTCCTTTCCGCAGTGCAGCGATTGCTCAGAGAGTACAACTCAGTACTCCTATCAGGACTTATACTGGTGAAAAACCTTTTCAATGTACTCACTGCAATGCAAAATTCCCTTCGAAATCCCAGCTTCAATCTCATATCAGGACTCATACAGGTGAAAAACCTTTTCAATGTTCTCAATGCAATGCGAAATTCACTACTAGTACTAATTTGAGAATTCACATGAGGACTCACACTGGTGAAAAACCTTTTCAATGTTCTCACTGCAATGCAAAATTCGCGAGAAAAAGTCATCTCCAACGTCACGTAATGACTCACACTGGTGAAAAACCTTTTCAATGTACGTACTGCCATTCAAAATTTTCTGAGAAAGAAAATTTGAAACTTCACATCAGGACTCACACTGGTGAAAAACCATTCCAATGTTCTCAATGCGTTGCGAAATTCACTGCAAGTTCTAGTTTGAGAAGTCACATGAGGACTCACACTGGAGAGAAACCTTTTCATTGTTCTCAATGCAATGCAAAATTTGCTTCGAAATCCCACCTTCAATCTCATATCAGGACTCATACTGGTGAAAAACCTTTTCAATGTTCTCAATGCAATGCAAAATTCGCTTCAAAATCCCACCTTCAATCTCATATCAAGACTCACACTGGTGAAAAACCTTTTCAATGTTCTCACTGCAATGCAAAATTCGCTAGAAAAAGTCATCTCCAACGTCACGTAATGACTCACACTGGTGAAAAACCTTTTCAATGTTCTCAATGCAATGCGAAATTCACTGCAAGTTGTAGTTTGAGAAGTCACATCAGGACTCACACTGGTGAAAAACCTTTTCAATGTTCTCATTGTAATGCGAAATTCACTGAAAGTTCTAGTTTGAGAAGTCACATGAGGACTCACACTGGTGAAAAACCTTTTCAATGCACTCACTGCAATTCAAAATTCGCTTCGAAATCCCAGCTTCAATCTCATATCAAGACTCATACTGGTGAAAAACCTTTCCAATGTACCCACTGCAATGCAAAATTCGCTTCGAAATCCCACCTTCAATCTCATATCAAGACTCATACTGGTGAAAAACCTTTCCAATGTACCCACTGCAATGCAAAATTCGCTTCGAAATCCCACCTTCCATCTCACATCAGGACTCACACTGGTGAAAAACCTTTTCAATGTTCTCACTGCAATGCAAAATTCACTAGAAAAAGTCATCTCCAACGTCACGTAATGACTCACACTGGTGAAAAACCTTTTCAATGTTCTCACTGCAATGCAAAATTCGCTAGAAAAAGTCATCTCCAACGTCACGTAATGACTCACACTGGTGAAAAACCTTTTCAATGTTCTCAATGCAATGCGAAATTCACTGCAAGTTGTAGTTTGAGAAGTCACATCAGGACTCACACTGGTGAAAAACCTTTTCAATGTTCTCATTGTAATGCGAAATTCACTGAAAGTTCTAGTTTGAAAAGTCACATGAGGACTCACACTGGTGAAAAACCTTTTCAATGCACTCGCTGCAATTCAAAATTCGCTTCGAAATCCCACCTTCAATTTCATATCAGGACTCATACTGGTGAAAAACCTTTTCAATGTACTGACTGCAATGCAAAATTCGCTTCGAAATCCCACCTTCAATATCATATCAGGACTCATACTGGTGAAAAACCTTTTCAATGTTCTGACTGCAATGCAAAATTCGCTTCGAAATCCCACCTTCAATATCATATCAGGACTCATACTGGTGGAAAACCTTTTCAATGTTCTGAATGCAATGCGAAATTCGCTAGAAAAAGTCATCTCCAACGTCACGTAATGACTCACACTGGTGAAAAACCTTTTCAATGTTCTCAATGCAATGCGAAATTCACTGCAAGTTGTAGTTTGAGAAGTCACATCAGGACTCACACTGGTGAAAAACCTTTTCAATGTTCTCATTGTAATGCGAAATTCACTGAAAGTTCTAGTTTGAGAAGTCACATGAGGACTCACACTGGTGAAAAACCTTTTCAATGCACTCACTGCAATTCAAAATTCGCTTCGAAATCCCAGCTTCAATCTCATATCAAGACTCATACTGGTGAAAAACCTTTCCAATGTACCCACTGCAATGCAAAATTCGCTTCGAAATCCCACCTTCAATCTCATATCAAGACTCATACTGGTGAAAAACCTTTCCAATGTACCCACTGCAATGCAAAATTCGCTTCGAAATCCCACCTTCCATCTCACATCAGGACTCACACTGGTGAAAAACCTTTTCAATGTTCTCACTGCAATGCAAAATTCACTAGAAAAAGTCATCTCCAACGTCACGTAATGACTCACACTGGTGAAAAACCTTTTCAATGTTCTCACTGCAATGCAAAATTCGCTAGAAAAAGTCATCTCCAACGTCACGTAATGACTCACACTGGTGAAAAACCTTTTCAATGTTCTCAATGCAATGCGAAATTCACTGCAAGTTGTAGTTTGAGAAGTCACATCAGGACTCACACTGGTGAAAAACCTTTTCAATGTTCTCATTGTAATGCGAAATTCACTGAAAGTTCTAGTTTGAAAAGTCACATGAGGACTCACACTGGTGAAAAACCTTTTCAATGCACTCGCTGCAATTCAAAATTCGCTTCGAAATCCCACCTTCAATTTCATATCAGGACTCATACTGGTGAAAAACCTTTTCAATGTACTGACTGCAATGCAAAATTCGCTTCGAAATCCCACCTTCAATATCATATCAGGACTCATACTGGTGAAAAACCTTTTCAATGTTCTGACTGCAATGCAAAATTCGCTTCGAAATCCCACCTTCAATATCATATCAGGACTCATACTGGTGGAAAACCTTTTCAATGTTCTGAATGCAATGCGAAATTCACTGCAAGTTCTAGTTTGAGAAGTCACATGAGGACTCATACAGGTGAAGAACCTTTCCAATGTTCTACAAGCAGTCATTTGCGAAGTCACGTAAGGACTCACACTGGCGAACAACCTTTTTTGTGCCCCTCCTTTAGTTCAACATTTTCTGGAAAAGGAAAGTTGAAACATCACATCAAGACTCACACTAGTGAAAAACCGTTTCAATACACTGACTGCAAAGCAAAATTCTCTAGGAAAATTCTAGCTTCAATCTCACATCAGGACTCATAG
Protein Sequence
MEGNSVDKFCFVGDSNRSTDDKEPSPTSNILASNFFPEFTIKTEKEPLYEEDAETTGHPVNQPKLANSLTECCKTDEKEIELGSIRFLSVSVKLEKDWNQPEGMLASSNNISVDMRKQEANCMTNGYIENHNFSQVSQYVAIDPICDKSIKREGRFSPENDIETVVEFKEETIFHQTNEVIKPMKDSDGTNSASICLNGKQQSELHELGPIIKVDVSNNVSASQQEGIRKNGTEPIASPFRSAAIAQRVQLSTPIRTYTGEKPFQCTHCNAKFPSKSQLQSHIRTHTGEKPFQCSQCNAKFTTSTNLRIHMRTHTGEKPFQCSHCNAKFARKSHLQRHVMTHTGEKPFQCTYCHSKFSEKENLKLHIRTHTGEKPFQCSQCVAKFTASSSLRSHMRTHTGEKPFHCSQCNAKFASKSHLQSHIRTHTGEKPFQCSQCNAKFASKSHLQSHIKTHTGEKPFQCSHCNAKFARKSHLQRHVMTHTGEKPFQCSQCNAKFTASCSLRSHIRTHTGEKPFQCSHCNAKFTESSSLRSHMRTHTGEKPFQCTHCNSKFASKSQLQSHIKTHTGEKPFQCTHCNAKFASKSHLQSHIKTHTGEKPFQCTHCNAKFASKSHLPSHIRTHTGEKPFQCSHCNAKFTRKSHLQRHVMTHTGEKPFQCSHCNAKFARKSHLQRHVMTHTGEKPFQCSQCNAKFTASCSLRSHIRTHTGEKPFQCSHCNAKFTESSSLKSHMRTHTGEKPFQCTRCNSKFASKSHLQFHIRTHTGEKPFQCTDCNAKFASKSHLQYHIRTHTGEKPFQCSDCNAKFASKSHLQYHIRTHTGGKPFQCSECNAKFARKSHLQRHVMTHTGEKPFQCSQCNAKFTASCSLRSHIRTHTGEKPFQCSHCNAKFTESSSLRSHMRTHTGEKPFQCTHCNSKFASKSQLQSHIKTHTGEKPFQCTHCNAKFASKSHLQSHIKTHTGEKPFQCTHCNAKFASKSHLPSHIRTHTGEKPFQCSHCNAKFTRKSHLQRHVMTHTGEKPFQCSHCNAKFARKSHLQRHVMTHTGEKPFQCSQCNAKFTASCSLRSHIRTHTGEKPFQCSHCNAKFTESSSLKSHMRTHTGEKPFQCTRCNSKFASKSHLQFHIRTHTGEKPFQCTDCNAKFASKSHLQYHIRTHTGEKPFQCSDCNAKFASKSHLQYHIRTHTGGKPFQCSECNAKFTASSSLRSHMRTHTGEEPFQCSTSSHLRSHVRTHTGEQPFLCPSFSSTFSGKGKLKHHIKTHTSEKPFQYTDCKAKFSRKILASISHQDS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-