Tvap014981.1
Basic Information
- Insect
- Trialeurodes vaporariorum
- Gene Symbol
- Kr
- Assembly
- GCA_011764245.1
- Location
- HIC:14657107-14658499[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.0022 1.2 9.2 1.6 17 41 10 31 5 33 0.89 2 13 0.014 7.5 6.7 5.7 3 41 25 59 24 61 0.77 3 13 0.1 58 3.8 2.4 17 41 66 87 60 89 0.81 4 13 0.0062 3.4 7.8 2.3 13 41 90 115 79 117 0.80 5 13 2.8 1.6e+03 -0.7 0.7 18 41 123 143 116 145 0.79 6 13 0.94 5.2e+02 0.8 12.2 15 41 148 182 140 184 0.88 7 13 0.023 13 5.9 6.0 6 41 207 238 182 241 0.83 8 13 0.13 74 3.5 4.1 17 41 245 266 239 268 0.83 9 13 0.0031 1.7 8.7 1.6 14 41 270 294 260 296 0.76 10 13 0.0018 1 9.5 4.7 17 41 301 322 295 324 0.88 11 13 0.0025 1.4 9.0 4.4 18 41 330 350 325 352 0.88 12 13 0.002 1.1 9.4 5.3 17 41 357 378 351 380 0.88 13 13 1.3 7.1e+02 0.4 10.9 17 41 385 406 379 418 0.88
Sequence Information
- Coding Sequence
- ATGAGGACTCACAACGGTGAAAAACCTTTTCAATGTACGTACTGCCATTCAAGATTTTCTGATAAAGGAAATTTGAAACGTCACATCAGGACTCACACTGGTGAAAAACCTTTTCAATGTGCTCACTGCAATGCGAAATTCACTCAAAATTCTAGTTTGAGTAGTCACATGAGGACTCACACTGGTGAAAAACCTTTTCAATGTACTCACTGCAATGCAAAATTCCCTTCGAAATCCCACCTTCAATCTCATATCAGGACTCATACTGGTGAAAAACCTTTTCAATGTTCTCACTGCAATGCAAAATTCCCTGCAAGTTCTAGTTTGAGAAGTCACATCAGGACTCACACTGGTGAAAAACCTTTTCAATGTTCTCAATGCAATGTGAAATTCACTCAAAATTCTAGTTTGAGAATTCACATGAGGACTCACACTGGTGAAAAACCTTTTCAATGTACTCACTGCAAGACTAAATTCTCCCAGAAATCCCATCTTCAATGTCACATGAGGACTCACACAGGCACTTTTAAACGTCACATCAGGACTCACACTGGTGAAAAACCTTTTCAATGTCCTCACTGTAATGCAAAATTTGCTTCGAAATACGATGTTCAATCTCATGTCAGGACTCATACTGGTGAAAAACCTTTTCAATGTTCTCAATGCAATGCGAAATTCACTCTAAGTTCTAATTTGAGAAGTCACATGAGGACTCACACTGGTGAAAAACCTTTTCAATGCACTCACTGCAAGACTAAATTCTCCCAGAAATCCCACCTTCAATCTCATATCAGGACTCATACTGGTGAAAAACCTTTTCAATGTTCTCACTGCAATGCAAAATTCCCTGCAAGTTCTAGTTTGAGTAGTCACATGAGGACTCATACTGGTGAAAAACCTTTTCAATGTACTCACTGCAATGCGAAATTCACTCACAGATCTAATTTGAGTAGTCACTTGAGGACTCACTCTGGTGAAAAACCTTTTCAATGTACTCACTGCAATGCGAAATTCACTCATAGATCTAATTTGAGTAGTCACATGAGGACTCACACTGGTGAAAAACCTTTTCAATGTACTCACTGCAATGCGAAATTCAGTCATAGATCTAATTTGAGTAAACACATGAGGACTCACACTGGTGAAAAACCTTTTCAATGTACTCACTGCAATGCAAAATTCACTACAAGTAGCCACTTGCAACGTCACATGAGAACTCACACTGGTGAAAAACCTTTGCAATGTACTCACTGCAATTAA
- Protein Sequence
- MRTHNGEKPFQCTYCHSRFSDKGNLKRHIRTHTGEKPFQCAHCNAKFTQNSSLSSHMRTHTGEKPFQCTHCNAKFPSKSHLQSHIRTHTGEKPFQCSHCNAKFPASSSLRSHIRTHTGEKPFQCSQCNVKFTQNSSLRIHMRTHTGEKPFQCTHCKTKFSQKSHLQCHMRTHTGTFKRHIRTHTGEKPFQCPHCNAKFASKYDVQSHVRTHTGEKPFQCSQCNAKFTLSSNLRSHMRTHTGEKPFQCTHCKTKFSQKSHLQSHIRTHTGEKPFQCSHCNAKFPASSSLSSHMRTHTGEKPFQCTHCNAKFTHRSNLSSHLRTHSGEKPFQCTHCNAKFTHRSNLSSHMRTHTGEKPFQCTHCNAKFSHRSNLSKHMRTHTGEKPFQCTHCNAKFTTSSHLQRHMRTHTGEKPLQCTHCN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01478334;
- 90% Identity
- iTF_01478334;
- 80% Identity
- iTF_01478334;