Tvap017487.1
Basic Information
- Insect
- Trialeurodes vaporariorum
- Gene Symbol
- -
- Assembly
- GCA_011764245.1
- Location
- HIC:52250321-52252525[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 6 0.21 1.2e+02 2.9 2.5 11 28 464 481 449 494 0.73 2 6 0.00079 0.43 10.6 2.0 15 44 500 526 487 526 0.83 3 6 1.1 6.2e+02 0.5 0.2 17 30 545 558 540 565 0.81 4 6 0.00022 0.12 12.4 0.6 14 43 569 595 563 596 0.87 5 6 1.8e-05 0.01 15.9 0.2 18 44 613 636 606 636 0.93 6 6 6e-05 0.033 14.2 6.0 13 43 684 711 672 712 0.83
Sequence Information
- Coding Sequence
- ATGGAAGCGCTTGATATCGCTGGATTCGGAAACAAAATAAAAAGTGAAGCTGAAGAGTTTGATTTCAGTGATTCCAAGGATCAAGAATCGGGAACTGAGGGAAACAGAGAAAGAGTCCTAGACGCAGAGAAACATTGCTGCTCTACGCCAATTTTCCCTCCGACCTCAATGCCATTTTTTTCTTTTAAAGGCTTGAAACAAGAAGAACTGATACACTATGATCAGTTCCTTGCCGATACTTGTGTTAAAATTGAGAAAGCTGAAGTAGTGAATTTTCATGAGACAAATGACAAGATTCAGAATTCTCATCCCTCATTTCCTCTCCAAAATGAATGTAATAAAGTGTCCATACAGGATGAATCAAAATTATTTCCTTTATTCCAGTCCAATACAGAAGGTGTCTTAAGCATAAGCATGGGTATTGAAAGTAATGCTGTTTCGGTTTTAAAAACCAAATTTTCTACTAAAGAAGACGTTAAAATAGAATTGAGGGACGTTAAACAAGAGCCCAGCTCAGATCCTCAAGATGTTAAGCAGCTTGATTTTAAATCTTGTGTAAAAATTGAGAGAGTTGATGCAGTGAATTTTCATGAGACAAATGACAGGATTCAGAATTCTGATTCCTCATTTTATCTCAAAAATGAGTGTCATAAACTGTCCGTACAGAATAAGTATGTACAGAATGAATCAAAAATATCTCCTTTATTCCAGTCCAATTCAGATGGTGTCATGGACACATGTTTTATTGAACGTAATGCAGTTTCGGTTTTAAAAACCGAATTTTCTACTAAAGAAGACGTTGATTTAGGATTGAAGGGTATTGAACGAGAGCCCAGCTCAGATCCTCAAGATGCTAAGAGTTACTTTCAGCTTGATTTTAGATCTCCTCTTAAAATTGAGAGGGAGGAAGGAGTTAGTTTTCTCGAGACAAATGACAAGATTCAGAATTCTCATTCCTTATTTTCTCTCAGAAATGAATGTAATAAACTGTCAGCACAAGATAAATATGCACAGAATGAATCAAAAATATCTTCTTTATTCCAGTCAAATTCAGATGGTGTCTTAAACACGGGTTTTATTGAAAGTAATGCAGTCTCAGTTTTAAAAACTGAATTTTCTACCAAAAAAGACGTTGATTTAGGATTGAAGGACATTGAGCAAGAGTCCAGCTCAGATCCTCAAGATTCTAAAAGTTACTTTCAGCTTGATTTTAAATGTGAATCAAACTCCACTTTGTCTTTGAAACCTTGTAAAATCTTACGCAAGAATGTCGCTGCCTACCCTGGTGCGGATGATATCCTTTACATTTGCGATGACTGTAAAAAATCTTTCCTGCAAAAGCGAGACCTCAAAAGGCACATCCTTAAAATACACTTAAACCAACAGAGTCAGAGCAAAGAACTAAAAATAGCTTGTAAATTTTGCGGATCTTCTTTCCATTGGCGGACGATTTTACATCGGCATCTGTTCCTCTTCCATCAGGAAAAGGCCGGTGAACTACTGTACGAGTGTTATCATTGTGGGAATGCATTTGCAAAAAAAAATGGTCTATTAATGCACATGCAGAGAGTGCATTCACAGATGAAGAAGAAGACTTCCAGCAAAACTAATAAAGGTTTGAACGTTGGTCGTTTTCAATGTGATTCTTGTGAGAAATCTTTCACCTCGAAAAGGACTCTTCAAGGGCACTCAGCTATTCACACAGGACAACAGCAAGTGTGTAAACTGTGCAATGCTGCTTTCACGGACCGGAGCAACTTTAATCGACATCTGCGGGAAGTTCATACCCTGAAGCCTATGCATACTTTGAAGCGAATCTCAGTCTCTGAAGATACAGAATGCAAGATTTGCGGACAGCGTTTTTCAAGACCTTGGAATCTTAAGAGGCATATTACCAGGAAGCACTCAAACAACACACAACTCTACCAGCCCCACCCCAGCAAAATTAAAGATCATCTGGACTCTGGTAGACCCTTGTACGATTGCAAAGATTGCAGTTCCTTGTTCTACCAGAGCTCTCATTTGAAGAGACATGAATTGACTGTTCATCAAAGAATCAAATATTCCTGTAAAGTATGTGATAAGAAACTTTCAGATCTGAGCTGTCTCCGAAAGCATCTTCGAAGGCAGCATGGTGTAATTAATGATAAGCGTAAAGTCAAAGGCATGAAAAACGAAGAGCTTAGCTTCTCTGAAAATGATTGA
- Protein Sequence
- MEALDIAGFGNKIKSEAEEFDFSDSKDQESGTEGNRERVLDAEKHCCSTPIFPPTSMPFFSFKGLKQEELIHYDQFLADTCVKIEKAEVVNFHETNDKIQNSHPSFPLQNECNKVSIQDESKLFPLFQSNTEGVLSISMGIESNAVSVLKTKFSTKEDVKIELRDVKQEPSSDPQDVKQLDFKSCVKIERVDAVNFHETNDRIQNSDSSFYLKNECHKLSVQNKYVQNESKISPLFQSNSDGVMDTCFIERNAVSVLKTEFSTKEDVDLGLKGIEREPSSDPQDAKSYFQLDFRSPLKIEREEGVSFLETNDKIQNSHSLFSLRNECNKLSAQDKYAQNESKISSLFQSNSDGVLNTGFIESNAVSVLKTEFSTKKDVDLGLKDIEQESSSDPQDSKSYFQLDFKCESNSTLSLKPCKILRKNVAAYPGADDILYICDDCKKSFLQKRDLKRHILKIHLNQQSQSKELKIACKFCGSSFHWRTILHRHLFLFHQEKAGELLYECYHCGNAFAKKNGLLMHMQRVHSQMKKKTSSKTNKGLNVGRFQCDSCEKSFTSKRTLQGHSAIHTGQQQVCKLCNAAFTDRSNFNRHLREVHTLKPMHTLKRISVSEDTECKICGQRFSRPWNLKRHITRKHSNNTQLYQPHPSKIKDHLDSGRPLYDCKDCSSLFYQSSHLKRHELTVHQRIKYSCKVCDKKLSDLSCLRKHLRRQHGVINDKRKVKGMKNEELSFSEND
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01478406;
- 90% Identity
- iTF_01478406;
- 80% Identity
- iTF_01478406;