Tvap003555.1
Basic Information
- Insect
- Trialeurodes vaporariorum
- Gene Symbol
- bab1
- Assembly
- GCA_011764245.1
- Location
- HIC:59920302-59932150[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.6e-14 2.4e-11 43.2 0.0 2 44 451 493 450 494 0.91
Sequence Information
- Coding Sequence
- GAATGATGATGGAAGTTATTTGATATTGGACAAGAACGGATTCTCTCGTCGATTCAAACCGAAAATATTCGATTCAACATTTTCCTGAAAATAAGAAAAACAAAACGAAAATTTTGAAAAAAGATTTTCGAAACAAAAATTCAAAATTGGGTGACTAAAAGGCTTTAATTTTTCCCAATGTCCGAAATGGCGGCTCTCCAGCAATACTGTTTGCGGTGGAATAATCATCGATCGAACTTGTTAACTGTTTTCGATCAGCTCTTGCAGAATGAGGCTTTTACCGATGTCACACTTGCCTGCGAGGGTGGACTCTCCGTGAAATGTCACAAAATGGTTTTGGCGGCGTGCTCGTCCTATTTTCAAAATGTGTTCACAGAATTACCATGCAGGCACCCTGTAGTTGTGCTTAAGGATGTCCGTTACTGTGAAATCAAGGCCATCTTGCAATACATGTACCGCGGCGAGGTCAACGTCCAGCAGGATCAGTTGGCGGCCCTTCTCAAGGTCGCAGAAGCTTTGAAGGTCAAAGGGCTTGTAGAGGAGAACAGCCAGGTTACAAAGTCCGAGGAAGACCCGAACACTATCACAACCTCTTCGAATCTGACTCAGGCGGCCACACCGCACAGTAGCAGCAGCAGTAGCCGAAGTAGCAATGGATCAAACGCGAGCATCATCAACAGCAACGCAAGCAATGGCGCCAACGGTACAGGGAACAGCGGGGGTAGCAACTCACCACCGCACTCGACCAGCGTTCAGAACCAAAGTCAAAGCTCAAGCAAATCTCCGTTCATGTACGGGAAGTCTCCGGTGAGCATGGATAGACCCGGGAGTCGGATGGGGTTACCGGTTTGGGCTGTACCGCACGGCCTACCCCTTTCCTCGACCCCCAATCCACACGCTGCGGCCATGTTGAGCTCCTGCTACGAGGCGGCCATGTCCGGATCAGATATTCCTCCACTGAGACGCAAGAAGATGTCAGGCATGATGTTGAGCAGGGATACGCCAATACTACGAACCGTACTTGGTCAGGGGCAAGCGGACTCGTCACAGCCGGTCTCATTGATCTGTCATCCAGATTCCCACGAACAACAGAATCACTCGAATAGCTCGGCTCAGGATATGGACAAAAGTGCTTCAGTCAAGGCGGAATATTCATCGGAAGGAGTTCCCTCACCGTACACGGATGTTTCAGTGGCAGATGACGAAATGAACGATCGGACAAGAATGATGCTGCATTCATCTTCACCAAAATCATTTTATGTAGATTCAAAAGGTGGTTCAGTATCATCAGCCATTGCCACGTACGTGCCTACCCAGAAACCAGAATGGAAGCGTTACAAACAATATACTCGGCATGACATTGATTCCGCGATTGAGGCAGTGCGCAATGGTATGAGTGCTTTACAAGCCTCGCGTAAATTTGGAGTGCCATCTAGGACGTTATACGATAAAGTGAAAAAGCGTGGTATTGTGACGAGTCGACCTTTTCGGCGAAGCTCAAGCGGTAACAATGGAGCAGCTTTCCCTTATGGAATTAGTGGTGCAAGTTTAATGTTAGCAGGTAACGAGGAAAATCATAATATGGTTCTTGAGCGTAACATGTACATGCATCATTCCTCTTCGGACATTGGTGATAACAGATCTTCAGACAATGATAGAGAAGCCGTCGCGGCCATCGCTGCTGCCGCAGCCTCTGGTGTGAATTCAGATAGAAACACATCAACTCCACCAAACAACCATCCTTCTCCCAGATCTCCAAGCCCAAATTTGATCAAATATGCTCACAGAAATAGTATGACTCCCTCACCTCCGCCGATGCAAGAGGGCGAAGACGATGAAGATCAGGTGGAGGACTTATCAATAGCAAGAAAACCGGAACCCCCACCCACTTCAAGGGTTATAATGCCACCAATGAGTCAAGCGACAGCAACCATGTTAGCAGCCGGTAGTGATAGTATACCATCGGACGGTGGTTTAGATTAATTGTTATGATTCGGTCTTTTTTCTCACGCAATGCCTTGTCTTTAGTTCCGATTGCTTTGATTATTATCGAACTTTCGCACCTTGTTTGGTTTTGAAAAACTATCGATTTTCTAGCAACTTATCATTAAATGAATATACAGTTTGCTGGATAAAGTTTCGGTGATGCAGCTTTTGTGTTTGTCTCTTGCTCAGAGATTAGTTTTAGGAATGCTGAATTTCTAAAAAGTTTTAAAAGAGCTTGTTTCTGAAACACATAAATGTTTCCTTACTCCTGTTACGAGGAAGGACTCGCACTTTTTCACAAGTCATACACTACGCACTGTCATAAAAAGTTTGAGGACAAGTGGTGGCACTCGTTTATGGAGTCAGTTTAATTTAATGCATGAAATAGAAACCATTCTGTGAGAAGCATAAAAAACTGTTTTTACTCCACAAATTGATCTCGTTCAACTCCTGGTTGAAAGCTTCCGATGTCAACTTATGTTTTCCTCTAAGTTTTTTTAAAAAATGAGATCCTGTAGGCATCAGCAACTGGCCTTTAAATTTATTAAATCAAAAATAAGTGGCTCATGATTCAATGGAACAATTCTTGATTTTATTTGAAAATACCACTAAAAATGTCCATCTTTTTCTGTATTCCAACACTCAAGCAACGCCATTGCTAGTACTTACAAGCTGTGTTTCAACCATTTGTACAAGGATTCATTCTCGG
- Protein Sequence
- E**WKLFDIGQERILSSIQTENIRFNIFLKIRKTKRKF*KKIFETKIQNWVTKRL*FFPMSEMAALQQYCLRWNNHRSNLLTVFDQLLQNEAFTDVTLACEGGLSVKCHKMVLAACSSYFQNVFTELPCRHPVVVLKDVRYCEIKAILQYMYRGEVNVQQDQLAALLKVAEALKVKGLVEENSQVTKSEEDPNTITTSSNLTQAATPHSSSSSSRSSNGSNASIINSNASNGANGTGNSGGSNSPPHSTSVQNQSQSSSKSPFMYGKSPVSMDRPGSRMGLPVWAVPHGLPLSSTPNPHAAAMLSSCYEAAMSGSDIPPLRRKKMSGMMLSRDTPILRTVLGQGQADSSQPVSLICHPDSHEQQNHSNSSAQDMDKSASVKAEYSSEGVPSPYTDVSVADDEMNDRTRMMLHSSSPKSFYVDSKGGSVSSAIATYVPTQKPEWKRYKQYTRHDIDSAIEAVRNGMSALQASRKFGVPSRTLYDKVKKRGIVTSRPFRRSSSGNNGAAFPYGISGASLMLAGNEENHNMVLERNMYMHHSSSDIGDNRSSDNDREAVAAIAAAAASGVNSDRNTSTPPNNHPSPRSPSPNLIKYAHRNSMTPSPPPMQEGEDDEDQVEDLSIARKPEPPPTSRVIMPPMSQATATMLAAGSDSIPSDGGLD*LL*FGLFSHAMPCL*FRLL*LLSNFRTLFGFEKLSIF*QLIIK*IYSLLDKVSVMQLLCLSLAQRLVLGMLNF*KVLKELVSETHKCFLTPVTRKDSHFFTSHTLRTVIKSLRTSGGTRLWSQFNLMHEIETIL*EA*KTVFTPQIDLVQLLVESFRCQLMFSSKFF*KMRSCRHQQLAFKFIKSKISGS*FNGTILDFI*KYH*KCPSFSVFQHSSNAIASTYKLCFNHLYKDSFS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01478262;
- 90% Identity
- iTF_01478262;
- 80% Identity
- iTF_01478262;