Tvap016939.1
Basic Information
- Insect
- Trialeurodes vaporariorum
- Gene Symbol
- -
- Assembly
- GCA_011764245.1
- Location
- HIC:33157285-33180721[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.1e-12 2e-09 37.0 0.0 1 39 1063 1101 1063 1106 0.92 2 2 3.4e-12 2.2e-09 36.9 0.0 1 37 1131 1167 1131 1170 0.94
Sequence Information
- Coding Sequence
- ATGCCCGCAAGCTTCAAGAATATCGGAATAAAGAAACTGAGCGAAAGAAACATATGTGTGCTAAGTAGAAAGAAAATGCTGAACGTAAGGACCAAAGAGAAATCAGGTAGAGAAATTGCAGCAACATCGAGCACCTCTGAACCCTCTCAAGAAGTCACTCCTTCTGACATCCCTCAATTATCAGAAGTAGATCCTCTAGAACTGCCCGTAAATATTGTGGCTATTGGAAACAGAAGTACAGAAAAATCTACTTCAGAAGAGGTCAAAAGAGAACTGACCAAAGACGAAGATGCAAGTGACCCTGCAGGGACCTCACAGTCTGCAGGGCTATTTTACCTGAACAGCGGTAATGAGTTTATGTCCTCAAGATCAACTGTAAAGAGGTTTCTAATGTCCACCGATGGATTGCATTTGACTCGCAAAGGGATTCTTGTTTTATTCTCTCATTTAATTGTTAGTATAGCTCATTTCTATCCAGCTTTTGTTGCTACACGGACCCAATCTGAAGCTCCTCCTTCTCGTTCATCTTCCCAAATAGTTGATCCATCCACCATTCCTATTCCTCTGTCTGTAGATCCATTGCCTCAACCTACTAAACCTTTTCATGCATTTTCCGCCATACCTTGTAGTGTTGCACCCAAACATGCAAATGTCACAGCCTCTCCTAAAACCCCTGACTCTCATCCATCAGTTCCATCCAAGTCTTATGCCTCTGTTCTATCAAATCCTACTTACCCGGAAGCTCCTCTTTTCCGTCTATCCTCCCAGGTTCTTAACAGACCCACTGCTCCTAATTTCCCTGCTGTTGATCCGTTTCCTAAGCCTGCTCCTAAACCTGCTGTGAAATTCTCGGATACTCCTCGGAATACATCCAAGCTCCCTCCTGGAAAAGCATCTCCTAAACCACCTGTCTCTCGTTTTAATCCATTTCCTACGCCTGCTGTGAAATTTCCCGTTACTTCTCGGAATACATCCAAGCTCTCTCCTGGAAAAGCATCTCCTAAACCACCTGTCTCTCGTTTTAATCCATTTCCTAAGCCTGCTGTGAAATTTTCCGTTACTCCTCGGAATACATCCAAGCTCCCTCCTGGAAAAGCATCTCCCAATCCACCTGTCTCTCGTTTTAATCCATTTCCTACGCCTGCTGTGAAATTTTCCGTTACTCTTCGGAATACATCCATAGCATCTCCTAAAGCACCTGCCTTTCATATTCAGCCATTCCAAGATTGTCCTCCTCTCGTTCATAAAAATTTAAATGGCAGAGGAGATGATGAATGCATAAAATATCCAAGGATTTGTAAAGATTGCCAAAAAACCTATGCCTCCAAATGTTCATTTTACAATCATATTTCGAAAAAAAGATATTCTGAAACGGTGAGGCAGCGAGAGAGCGAACCCCAGCGCTCGCAGATGATACAGTACAAGAAGCATCATACTTACTTCGCAAAACGTCTGATTGGCCCTGGCCCTCAGGGGAAGCAATTGAGAATGAGGATGTTGGAACAAGTTCCAATAATCCTGAAAGCCATGGGACCTGCGAGTAAGACCGCGGACGCATGGAAGCAAACTTGGTCAGACATTAAATCTCGCATTAAAGCGAAAGCTGCAAGAATGAAGACCGTTCCCACTGGCAACGGGAGCCAAGACGGGAAGGCAGTTCCGGATACTGAAACGGTGAGGCAGCGAGTGAGCAAGGCCCAGCGCTCGCAGATGAAACAGTACAAGAAGCATCATACTTACTTCGCAAAACATCTGATTGGCCCAGGCCGTCAGGGGAAGCAATTGGGAATGAGGATGTGGGAACAAGTTGCATATCTCCTCGAAGAGCGAGGGTACAGCTATGCTCTTACAGGACGCTTCACCCAAGATTGTATTGAAAATCTCTTCAGTCTTGTGAGGGACAAGCAGAAGACTCCAACTGCCTTGGAATTTAAGTCGAATTTAAAAAATGTAATGCTCTCTCAGCACATGAAAGATTTGTCCAGGGGTAGCTATGAAACTAATGATCGTCAAGAATTTTGCGATTTTCTTGACTTTCTTGCGAAAAAGCAACCACCATTGCAGCAAGTAAAATATAAATCCCACTCTGCTGTTTGTCTACTGGATGCAAACCAAATAAAATTAGGCAAAGCTCGACTTCTTACAGCTTGGGAGAAGGAACTAACAAGGAGTGGTGGGAATGAAGAAAATACGCCTATGTCAACATCTGATGGCAATCAAGGTGATGATGACATCCTTGGAGAAATCATGAAGAAAAATGAAGCAGAGTTACAATGCTGCAAGGCTAAGCCAAGCCGAGGCAAGGACACACTGAAACCGAAAATCGAAGAGTTTATTCGATTGCCAAGACTGGACGTAAAGAAAGACATTTTAGCATATTGGGAGAGTGAAAAGCTACTACGACGGGAGCTCTATCAACTCGCCATGATCTTCTTATGCAAAGCTCGACTTCTTACAGCTTGGGAGAAGGAACTAACAAGGAGTGGTGTGAATGGAGAAAATACGCCTATGTCAACATCTGATGGCAATCAAGGTGATGATGACATCCTGGGAGAAATCATGAAGAAACATGAAGCAGAATTACAATGCTTCAAGGTTAAGCCAAGCCGAGGCAAGGACACACTGAAACCGAAAATCGACGAGTTTATTCGATTGCCAAGACTGGACGTAAAGAAAGATATTTTAGCATATTGGGAGAGCAAAGCTCGACTTCTTACAGCTTGGGAGAAGGAACTAACAAGGAGTGGTGGGAATGAAGAAAATACGCCTATGTCAACATCTGATGGCAATCAAGGTGATGATGACATCCTTGGAGAAATCATGAAGAAAAATGAAGCAGAATTACAATGCTTCAAGGTTAAGCCAAGCCGAGGCAAGGACACACTGAAACCGAAAATCGACGAGTTTATTCGATTGCCAAGACTGGACGTAAAGAAAGATATTTTAGCATATTGGGAGAGTGAAAAGCTATTACGACGGGAGCTCTATCAACTCGCCATGATCTTCTTATGTATCCCTGCAACGCAAGTTTCAGTTGAAAGACTATTCTCTAATTTGAAATTTGTGAAGAATGACTACAGACAAAACTTAGCAAACGATTTCCTGGAGGACATCCTGCTATTGCGAATAGAAAAGAAGATCATGGGGAGAAAAAAGTATGTCAGGAAAACTACTAGAGGAAGTTGGGATCCTGCGAACATGCTGCAAGCACTGAAAGCTGTCCTAGAAGGTGAGATGGGGTACTTCAAAGCTGCCAAAACGTTTGGTGTACCTCAATCGACATTAGAAAGGCGGGCCTCTGGGCTCGAAAAGGCAAGAACTCTGCAGACTCTGAAAATCAGGATCATGGGGAGAAAACAGTATGTCAGGAAAACTACTAGAGGAAGTTGGGATCCTGCGAACATGCTGCAAGCACTGAAAGCTGTCCTAGAAGGTGAGATGGGGTACTTCAAAGCTGCCAAAACGTTTGGTGTACCTCAATCGACATTAGAAAGGCGTGTCCTCTGGGCTCGAAAAGGCAAGAACTCTGCAGACTCTGAAAATCAGAATCCTCCAACAGTCGCTGCGAAAAATCCTCCGAAAAATCCTAAGCAAGCAAAAACACCGCAGCCAGAAATGAGTGTGTCGGAGCATCTTTCAGCGCCAGGCCCATCCGGGGTAATAGCGAAACCTTCAGCACCGGGCCCATCCGGGGTAATTGCGAAACCTCCTCCTAAAAAGCCTATACCAGCGCCTGCAAAAAATCCTGCAGGGTCTTCCGCTAACACTGCGCCTGCTGAATTACTAACGCCGACTGATTCTAAAGCCACTAGTGCATTTAGAAATGTATCGCCGCATGACCTCATTCAACACTTCAATTTAGAAATACCCTGTCTCAGTTATGGGGTACCCCGTCTTATCCAATGGGGTACCCCATCTTACCCCAACGTTGGGGTAAGACGGGGTGATTTGACAAGTTGA
- Protein Sequence
- MPASFKNIGIKKLSERNICVLSRKKMLNVRTKEKSGREIAATSSTSEPSQEVTPSDIPQLSEVDPLELPVNIVAIGNRSTEKSTSEEVKRELTKDEDASDPAGTSQSAGLFYLNSGNEFMSSRSTVKRFLMSTDGLHLTRKGILVLFSHLIVSIAHFYPAFVATRTQSEAPPSRSSSQIVDPSTIPIPLSVDPLPQPTKPFHAFSAIPCSVAPKHANVTASPKTPDSHPSVPSKSYASVLSNPTYPEAPLFRLSSQVLNRPTAPNFPAVDPFPKPAPKPAVKFSDTPRNTSKLPPGKASPKPPVSRFNPFPTPAVKFPVTSRNTSKLSPGKASPKPPVSRFNPFPKPAVKFSVTPRNTSKLPPGKASPNPPVSRFNPFPTPAVKFSVTLRNTSIASPKAPAFHIQPFQDCPPLVHKNLNGRGDDECIKYPRICKDCQKTYASKCSFYNHISKKRYSETVRQRESEPQRSQMIQYKKHHTYFAKRLIGPGPQGKQLRMRMLEQVPIILKAMGPASKTADAWKQTWSDIKSRIKAKAARMKTVPTGNGSQDGKAVPDTETVRQRVSKAQRSQMKQYKKHHTYFAKHLIGPGRQGKQLGMRMWEQVAYLLEERGYSYALTGRFTQDCIENLFSLVRDKQKTPTALEFKSNLKNVMLSQHMKDLSRGSYETNDRQEFCDFLDFLAKKQPPLQQVKYKSHSAVCLLDANQIKLGKARLLTAWEKELTRSGGNEENTPMSTSDGNQGDDDILGEIMKKNEAELQCCKAKPSRGKDTLKPKIEEFIRLPRLDVKKDILAYWESEKLLRRELYQLAMIFLCKARLLTAWEKELTRSGVNGENTPMSTSDGNQGDDDILGEIMKKHEAELQCFKVKPSRGKDTLKPKIDEFIRLPRLDVKKDILAYWESKARLLTAWEKELTRSGGNEENTPMSTSDGNQGDDDILGEIMKKNEAELQCFKVKPSRGKDTLKPKIDEFIRLPRLDVKKDILAYWESEKLLRRELYQLAMIFLCIPATQVSVERLFSNLKFVKNDYRQNLANDFLEDILLLRIEKKIMGRKKYVRKTTRGSWDPANMLQALKAVLEGEMGYFKAAKTFGVPQSTLERRASGLEKARTLQTLKIRIMGRKQYVRKTTRGSWDPANMLQALKAVLEGEMGYFKAAKTFGVPQSTLERRVLWARKGKNSADSENQNPPTVAAKNPPKNPKQAKTPQPEMSVSEHLSAPGPSGVIAKPSAPGPSGVIAKPPPKKPIPAPAKNPAGSSANTAPAELLTPTDSKATSAFRNVSPHDLIQHFNLEIPCLSYGVPRLIQWGTPSYPNVGVRRGDLTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -