Tvap004643.1
Basic Information
- Insect
- Trialeurodes vaporariorum
- Gene Symbol
- ARID5B
- Assembly
- GCA_011764245.1
- Location
- HIC:16032267-16050380[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.9e-23 2.2e-19 69.6 0.1 1 89 221 300 221 300 0.94
Sequence Information
- Coding Sequence
- ATGGACATTTTCGGAAAGAGATTGGGAAAGTTTATGAAGGCGGATGAAGTTCTAGCCATCACTGAAAAAGTAGTGATACGGATCGAAGATCTACTGACATGGATCTACGAGGCAACAGATTGGGGATGGGGGCTAGGCGCAGTATGGACCAAAGACTGTCAGGAGAAAACTCTATCGTCCAACTCAAATCTTGGCATAGACTTCTCAGATGTAGAGCAAGAGAAGAAGCAATTAGATGATTCTCATTGGGAGACAAGTATGGGTGTTGTTGTGTTAAGTTATCCTCGATATTGTCGTTACCGAGGTATCCTGAGAAGGTTGGAAGGCGTTCATAACAAATGGCTAAGGACAGCTCTTGTTATGGCTCTTGGTGGCATTGCCTCCCCCTGTAAAAATACTAGAGTACTGTTTTGTAAAGATACATTCGACTATCCTGACCTTGAAGGCCATGAACTTTTGTGCAATCATTTAGCTCCAAAAATCAGGTGCAAGTCAAAACGAAAAAGGAAATTCCTCAGCTTTTCTCCAGAAGAATCTGACACAGAATCGGAGACCTCTTCGTCCTCATCTTCGTCTGAATCTTCCACATCCTCTCAACAGGCCTCTGCTAGAAACACACTTCTCAGTGCCTCAAGAAACATTCCTCATAGCGGTAGCATTCAAGAGAAGAATTTCTTGTCAAGTTTGTACAATTTCATGATGAACCGACGAACTCCTATCGGTGGATTACCCATGGTTGGATTCAAAAAACTAGATCTATTTCGTCTTTACGAAAAAGTTCGTCTTTTGGGTGGTTATGACTCTATTACTGCTAACCGGTTGTGGAAGTATGTCTCTCAAGAAGCTGGAAATTCTAGTTTTTGTAAACGACATTATGAAAAGTATCTTCTACCTTTTGAGCGGCAAATGACCGAGTCGCAACCAAAATCACAGTCTGACAACAAAATAAAGCGAGAGGGCGAGTCTAGTACAGGAAACAAAGGATCGCGCAATCATTCGCTGAGTATATTCTTCCATCATGAAAATAAGGAAATCAATAATCTAATGGCAGTGAGAAAAAGATCAGTAATGGAAAATAGGAATGCATTGCAAAACATTCGACTCATGCCGATTGAAAAGCCTCGAGACAAGGAAAATATACCGCTTCGTAGAATCAGGAGAGAAGAAAGAGTGGCACCTCCTCCGCCTGAAGTAATCGATTTGGTTGATGATTCTCCTATGAAAAAAGAGGAAGCTGGAGGCTCGTCAGCATCTAAAAAGCAGAAATTAGACATTCTTAAAGAAGGAGGACTGGAAGTTACTCCAGTAGCAACAAAAGAAGAAGGAGGTGGACCCTCGACCCCTGTCGTCAAACCTGCGCCACCTGCTCCCAGTCCAGGAAAAATTTCGATAACCGTAACTCCAGATGTGAGCCATATGCTCAGTGGTGGAGCAACCATACTACCAGCTACGTCATCGAGCGACTCCTCCAAACCCAAATTGAGTAATTTCATGCCAGCTCCTCAATCATCGTCGCAGTCCAATGGCCGTTCCTTACCTCCACCTCTTAAGTCAGCATATAACTTTAGTGATAAAACTATCTACGGGAATCCCAAAGAAATGTTTCGTTGTAGTTCTCAAGTTAAAAAAGATATTGCTCCGTTCCTGAAAAACAATAAGAGCATTAGTTTAATAGAAGTGCGCAGTGATCAGCCCGGGAAAAAAGTCGTAAACCTAAGCAGTGATTTAAGTATGAAGATTAGTAATTTGAATAGGAATGCTGGCAAAAGTAATTTTGTTTCAATTACGAAGCATGATGGAAGTAGCAGTAGTTCGCGAAATAATGGTTCTTGTGAAGTTTTAGACTTGACTGTTAAAAGTGATTGGTCAGCTCAAAATTCTGCCCAGTTCCCCAAGAAAGGTTCAAATTTAGAAATTACTCTTATACCGAAGCCGAGTGGGTCATGTTCGTCGGACAAACCTAGAAATTTATCAAACCCATCCTCGTTACAAAAACTTGTTGGCGGAACCCATGGAGTGATTCCCAAGCAACCAACCAATTCAGCCAATAATAAATCTGGCGTTAACAATAGATCTCAAAAACCGGTTCAGCTTTTGCCGGTGGCTTCAACCAGTAGTTCGTCACATTCCGCTCGTAAGCCCCCCCCAGGTATAGATCCTTCGGTTTCAGCTTTCATCCCCGGAGCCATGAACCCTGTTCTTTTACAAGCATTATACAACGGGTTCATTCCTCCGCAATTCTTATCTCATCCTTTATATCCGCCCAATCAATCCTCCGTTCAAGCTTTTAAAGAACTGATGAAGAATAGTCGCAGTAAAAATGCATTCCCCCCATTTTTCCAGGACGGCTCTACTTCTATAACGAGAGTTGGTGATAATCATGTTCCCACATCGAAGTAATTGATTTTTGGATCTGTGCCATAATTCTTTGCCTCTCTGTTCTAACTGCTCTGCTTTGAAATTCTGTCGGTGCGAACAAGGAATCTTTAAAAGAATCTTCCTGAAATCATTAAAGTCACTGGGCTAAAAGTCAGTGAAAAACAAATACTTTAGCAGTCTCTCTTCTTATATCTTGTCTGTAAAGATGCAGCCAAAATCTGTTTTTGCGTTGGTTTTCTGATGTTTAATATTTTTCATCAA
- Protein Sequence
- MDIFGKRLGKFMKADEVLAITEKVVIRIEDLLTWIYEATDWGWGLGAVWTKDCQEKTLSSNSNLGIDFSDVEQEKKQLDDSHWETSMGVVVLSYPRYCRYRGILRRLEGVHNKWLRTALVMALGGIASPCKNTRVLFCKDTFDYPDLEGHELLCNHLAPKIRCKSKRKRKFLSFSPEESDTESETSSSSSSSESSTSSQQASARNTLLSASRNIPHSGSIQEKNFLSSLYNFMMNRRTPIGGLPMVGFKKLDLFRLYEKVRLLGGYDSITANRLWKYVSQEAGNSSFCKRHYEKYLLPFERQMTESQPKSQSDNKIKREGESSTGNKGSRNHSLSIFFHHENKEINNLMAVRKRSVMENRNALQNIRLMPIEKPRDKENIPLRRIRREERVAPPPPEVIDLVDDSPMKKEEAGGSSASKKQKLDILKEGGLEVTPVATKEEGGGPSTPVVKPAPPAPSPGKISITVTPDVSHMLSGGATILPATSSSDSSKPKLSNFMPAPQSSSQSNGRSLPPPLKSAYNFSDKTIYGNPKEMFRCSSQVKKDIAPFLKNNKSISLIEVRSDQPGKKVVNLSSDLSMKISNLNRNAGKSNFVSITKHDGSSSSSRNNGSCEVLDLTVKSDWSAQNSAQFPKKGSNLEITLIPKPSGSCSSDKPRNLSNPSSLQKLVGGTHGVIPKQPTNSANNKSGVNNRSQKPVQLLPVASTSSSSHSARKPPPGIDPSVSAFIPGAMNPVLLQALYNGFIPPQFLSHPLYPPNQSSVQAFKELMKNSRSKNAFPPFFQDGSTSITRVGDNHVPTSK*LIFGSVP*FFASLF*LLCFEILSVRTRNL*KNLPEIIKVTGLKVSEKQIL*QSLFLYLVCKDAAKICFCVGFLMFNIFHQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -