Basic Information

Insect: Trachymyrmex zeteki
Gene Symbol: egl-46
Assembly: GCA_001594055.1
Location: NW:140681-142332[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 8.5 5.6e+02 0.6 1.9 1 21 336 356 336 361 0.80

2 3 3.5e-06 0.00023 20.7 1.0 1 23 364 386 364 386 0.98

3 3 4.5e-05 0.0029 17.3 0.2 2 23 410 432 409 432 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	8.5	5.6e+02	0.6	1.9	1	21	336	356	336	361	0.80
2	3	3.5e-06	0.00023	20.7	1.0	1	23	364	386	364	386	0.98
3	3	4.5e-05	0.0029	17.3	0.2	2	23	410	432	409	432	0.95

Sequence Information

Coding Sequence: ATGCTTCACGGCGCTTTACCGCGGGCCTTTTTGGCTCCGGGTCTTAACTACATGAGCTATTACAGCGAAGAGATTCATCCTACTTACGCTGCGCCGCCGACCACGTGGCATATTCCAATGGAGGACCCATCCTCGCCGATTTACTCACGAATCCCACCAACTGAACATCATGCATCATTATCCTGGGAGTCCTCGAGATCTTCGACGCCGTGTCCGTTGGATCTGTCCTTGAAGCCGCCACCAACACCGAATACCCCGAAGACAGAAGAGATGATCGAAGTGGGTGTCGAAAAAGATCTCAGGATCCGCGAGGAGGTCCAAGCTCGTCCCGAAGATCGCAGAGATAGCGAGGAAGATCAACAGCTGATTGTCGACGACTTGGATACCTTACGAAGCTCCTCGGCGCAGAGCCATCAGAGCCAGTACGAACGACTGGTCCTTAATAAAGAATCGCCTCGCTTTCACGATTCCATTGTTGATAAGTTTCATTTTCCCGAAGAGACTACTCGATTGCCGCCATATGCCGGAAGTGAGCTCGCCTCAAAGTATCACCTGCATAATCAGAAGCTCCTTTTGGCAAGTCCAACGCACTTACAATCGATGCAGAGTTATCACCAGCAATTGCTTTTAACACCACAGCAACATCTTCAAAGTGTGCACGCGCCTATGACCCCGCCTAGTACACCATCACCGCCTCAGTGTCCTAGGAGAAGAGTCCGAGAGGAAGATCTCATCTTACCGTCCTCGGGGGTGCCTACCAACGGCGCTTCCTTATCGACCCCAAAGCAGATTAGCAATGAGAAAACCGTCGCCCAAAGGCCCAAGAAGAAACACGCCAGGCGGCTCAAATTCGACGAGGACACCAGCAGCCCGGTATCGGGCACCGTCATCTTGGGTCCGGACGAGGCGGTGGTGACCGGCGACATCGATCCCGCCTTCAACATTGTCGAGGTCACGGAGGAAGCGCGCGCTGAGCTAGCCAAGATCGAAAATCGGCTCGGACCGTATCAGTGTAAGCTTTGTCGGCAGCTGCACGAGGATGCCTTCCAGTTGGCGCAACATCGATGCTCCCGAATCGCCCACGTGGAGTATCGTTGTCCCGAATGCGACAAGCGGTTTTCCTGCCCGGCTAATTTAGCGTCTCATCGACGTTGGCATAAACCCAGACTACCCAATACTGACAGTTCCACTACGTCGTCATCTACGTCGTCGAACAACGCTGAGATCCCGTGCACCAGATGCGAGGCCAAGTTCACGAGGCAAGCTGCCCTGCGTAAACATCTCGCCACTCAACATCCTGAGACCAATAACAACGTCAGCAATAGCAATAATAACAACGTCGGAGTCGACAGTCAGGAAGTCATCGGTAAATCAGACATCGCCCAAACAGTTCCGACCAGCCAGTTGACCAGCGAGATGACTTGA
Protein Sequence: MLHGALPRAFLAPGLNYMSYYSEEIHPTYAAPPTTWHIPMEDPSSPIYSRIPPTEHHASLSWESSRSSTPCPLDLSLKPPPTPNTPKTEEMIEVGVEKDLRIREEVQARPEDRRDSEEDQQLIVDDLDTLRSSSAQSHQSQYERLVLNKESPRFHDSIVDKFHFPEETTRLPPYAGSELASKYHLHNQKLLLASPTHLQSMQSYHQQLLLTPQQHLQSVHAPMTPPSTPSPPQCPRRRVREEDLILPSSGVPTNGASLSTPKQISNEKTVAQRPKKKHARRLKFDEDTSSPVSGTVILGPDEAVVTGDIDPAFNIVEVTEEARAELAKIENRLGPYQCKLCRQLHEDAFQLAQHRCSRIAHVEYRCPECDKRFSCPANLASHRRWHKPRLPNTDSSTTSSSTSSNNAEIPCTRCEAKFTRQAALRKHLATQHPETNNNVSNSNNNNVGVDSQEVIGKSDIAQTVPTSQLTSEMT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00385932;
90% Identity: iTF_01409573;
80% Identity: -