Basic Information

Insect: Trachymyrmex zeteki
Gene Symbol: salm
Assembly: GCA_001594055.1
Location: NW:445828-530990[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 1.6e-05 0.0011 18.7 1.0 1 23 370 392 370 392 0.98

2 9 6.6e-06 0.00043 19.9 2.1 1 23 398 420 398 420 0.98

3 9 3 2e+02 2.1 3.3 3 23 783 803 782 803 0.92

4 9 2.9e-08 1.9e-06 27.3 0.6 1 23 809 831 809 831 0.97

5 9 4.6e-05 0.0031 17.2 3.5 1 23 841 863 841 863 0.98

6 9 0.0082 0.54 10.1 3.2 2 23 1156 1177 1155 1177 0.97

7 9 0.021 1.4 8.9 1.0 1 14 1183 1196 1183 1197 0.92

8 9 3.9e-07 2.5e-05 23.7 2.1 3 23 1392 1412 1390 1412 0.96

9 9 1.3e-07 8.7e-06 25.2 0.9 1 23 1418 1440 1418 1440 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	1.6e-05	0.0011	18.7	1.0	1	23	370	392	370	392	0.98
2	9	6.6e-06	0.00043	19.9	2.1	1	23	398	420	398	420	0.98
3	9	3	2e+02	2.1	3.3	3	23	783	803	782	803	0.92
4	9	2.9e-08	1.9e-06	27.3	0.6	1	23	809	831	809	831	0.97
5	9	4.6e-05	0.0031	17.2	3.5	1	23	841	863	841	863	0.98
6	9	0.0082	0.54	10.1	3.2	2	23	1156	1177	1155	1177	0.97
7	9	0.021	1.4	8.9	1.0	1	14	1183	1196	1183	1197	0.92
8	9	3.9e-07	2.5e-05	23.7	2.1	3	23	1392	1412	1390	1412	0.96
9	9	1.3e-07	8.7e-06	25.2	0.9	1	23	1418	1440	1418	1440	0.98

Sequence Information

Coding Sequence: ATGTCACGGAGAAAGCAGGCCCGACCGAGTCGTGCTCATCTCGAGGAGGATCTTGTCCAGAGGCCTCTGTTGACCAATCCCATTGGAACTGTCGCGGGCAATATCCgAGAAGAAAATGACTTTACATCAGATGGTGAAGAGAGTGGTGGTGGTGGAGGAGGTGGCGAGGAAGCCGTGGATCTCACAGCGACGAGATCTCATCAGGGCGACGATGATCCTATGGAAGAGGATGAGGAAGAAGGTATTGATGAACAAGACGAGCAGGATGAGGATGAGGAGGGTTCACGCAAACAGATTCATCATCGACAAGACGcggagaataataataattttgtggaGAGCGGCTTACCTACCGCTATATTCCCACCAGCTGGAACTAGTCACGTCACCCTCGAAGCCCTTCAGAATACAAAAGTGGCGGTCGCTCAGTTTGCTGCTACTGCTCTTACTGGGGCAGACAGCGAAGCGGCGCTACAAGACCTGGCATTTCTGGAAAACACGCTGTGCACCCTTCAGAATCAACAGGTATTACAATTACAGCTGATTCGACAACTTCAGCAGCAATTATTGATCACTCACGGGCAATCGGTAATGCAATCGTCGACGGAATCAACCGATAACAAAGAGGCTTCGTCGTCTCCTATTATTCATCCGAAACCATTGTCGAGTCTCGCGTCACCTCCTTCTTCTCGTCCGCCAAGTCATCATCAGCAAACATCACCAGCGCCGCTGACACCGAATCTGCTTCAGGAACGACCCACCTCGACGAGCAGCGCCTCTCCTTTGAATCTACCCTTATCTTCGTCCGGCACGACATCAACTGTCATTACGACCACCAGCAGTCAGATGCCAATGCCACATCAAATACCACATTGCTCGATAAGCGCTTCCCTCGCTTCATCGATCATAACGAACACCGATCCGCCTCCGCTTCACGAGCCAAATACTCTGGACATTCTTCAAAAACGTACCCAGGAAGTATTGGATAATGCGAGTCAAGGACTAGCTAACAATTTGGCCGACGAGCTCGCGTTTAGAGGCAAGGGCTCGCGACTATCTCCTTACGATTCGAAATCAAGCGGTGGTCGCGGCGAGCCCTTCTTCAAGCATCGATGTCGCTTCTGTGGCAAAGTCTTCGGTAGCGACTCGGCGCTACAAATCCACATACGATCCCACACAGGTGAGCGACCTTTTAAGTGCAACGTATGTGGCAGTCGGTTTACAACCAAGGGCAACCTGAAGGTCCACTTCCAAAGGCACACGGCCAAATTTCCACATGTTAAGATGAATCCGAATCCCGTTCCAGaacatttagataaatatcaCCCACCCCTCTTGCAGCAAATTGCTTCCGGGAGACCGATGCCGTCcccgccgccgccaccaccaccatcCTCTCATCACCCCTCGTTTCATCCGGCAACAACGCACGGTTTCCTCCCACCACAACCACCCATACCTCTGAGTCTCACCTTATCCAATATGACGCCCCTTTATCGATCTCCAGTTATTAATCATCGGGACGATCAAGATGTACCGGAGAACCTTAGTAAACCTATAACCACCGCTCCACAGACATCACCCACTTCTCCCGCTGCCGTATTGAATTCTCGTCATTCCTTTCATGACAATCTTCATCAACAACATCAAAAGCAGCAACTTGAACAGAGAGAGGAGATAAAGCTCGAACAGAGATCACCCGGACAGGAGCAGTATCAACGACCGATGAGTCGGGAAGGCGCTGAGCGTATAACACCGAAGAGAGAACCTGAGGAAGCGGAAGAAGTTGCAGAGGAAGAGAGCGAAGATTTTGAGGACACCACGAGACGATACCTCAATTCACCTCAATCCGCGAATCCACCGTCCCAACCGCAAACGTACGAGGATTGTAGTATGGATAGTAAAATCAGTGGACGTTTAGAAGGCGACGGAGAGATGGAAGTGGACGAGGAAATAGAAGAACAGCCTGAAAACCTCTCAAGCAGAGGTACAATCAATCGTTTGCCTCAACAGATTGTGACATACCCAGGAGCATCGCCAGCCAGCAGTAGCGCGAGTAGCGGTAGTCTACAGACATCTTTCGCTGGAATCCTATTTCCAGGTCCCCCGGCTCATCACCAAATTCCTCATCTTCCTGTTTCTACGCAGACAGGACCAATCATGGCATCCGGAAATGAAATGATCGATCCAGCCAAGGACCCAGCGATTTATTCGACTTTACTACCACGGCCGGGCAGCAATGACAATTCCTGGGAGAGCTTGATTGAAATAACGAAAACTTCAGAGACGTCCAAGCTACAGCAACTAGTCGACAATATCGAGCATAAACTGAGCGATCCTAATCAGTGCATCGTTTGCCACAGAGTGCTCTCATGCAAGAGCGCGTTACTGATGCATTATCGCACTCACACTGGCGAACGTCCTTTCAAGTGTAAAATTTGCGGTCGTGCTTTCACGACGAAGGGCAATCTGAAAACCCACATGGGAGTGCACAGAGCTAAACCACCACTGAGAGTGTTGCATCAGTGTCCTGTGTGTCACAAGAAATTTACGAACTCTCTCGTATTGCAGCAACACATACGTCTTCATACCGGAGAACCCACCGATCTCAGTCCGGAACAGATTCAGGCTGCAGAAGTGAATGAGTTCCCACCCGGTTACCATCCGTTGGCATCTTTTCTCCCTCAAGGCTTTCCACCGATACATCCGACCAGTACAGGCTTCTCCTTAGGATTCCCTCCATCCAGGCAAACGGCTATCGAACAACAATTGCAGGAGAGCGACATCGAAACGAAAGAGGAATCTCAGCAACGACAGAGATTTATGGAGGAGCATAGCGAAGAAATGGAAGATCAAGAAGATGAAGAGCAAGATCACAGAGAGGACGATGATAGGTGCGAATTGAATCGCGATAGGCGTAGCGTTGAAATCGAAGAGGAGCAGGATCACGAAAGTGAAGATACAACCGAACACAAGGACGTAACACTTCCTATATTTTCGACTTCGTTGGCGGCGCTCGAGAACCAAGTAAGGACCATCACGACGACAGCCGCGACCACGAACGTAGCCAGGTCACCGTCCTTTCATCGATACAACGGTAGCGAGAAGAGCACTAGCCCACCAACATCCGGAGCTCCGCTCGACTTGACGCCCCGTGCTTCGTCCACGCCAGCGTCGGTGGCTTCAGCATCGCCGACACCACCACCCCAAACTACGCCGCATCATCCACCAAATCCCTTCGGCATGTTCGCGGGACTACTACAAGCAGTTTCGTCTACTCCTGCTACTAGCACGATAGGCACATCGAACATAAACAGCATCACTTCGATGAATGCCGTGAACCCGGGAAATGGGCCTGGCACCGGACCACTAGCCTCGCTGACCACTTCAGCCGTACTAGCTGCATCATCGACCTACAATCCGCTCGGCCTAGCTGTTGGAGGCCCAGCAGTACGTGGCAACACCACATGTAAATTCTGCTACAAGACGTTCGCGTGCCAATCTGCATTGGAGATTCATTACCGGAGTCATACGAAGGAGCGACCTTTCAAATGCACCATATGCGATCGAGGTTTTTCTACGAAGAACGATGATTCCGGTCAGCAAGTATGCTCCTGCGCGGACCAACCCTTCGCCGCGAAGGGTCCGATTCTCCCACAACCCAATTCCCAATATCGCTCGTACCCGGCGAAATCGGCCGCCGGAAATAGTGAGAAACCGAAACGCAGGCGGCGGCGGCCTGAGGAACGGAAGAACCGGGGGCGGACAGGAACAGGAGGGGGGCGAAGGCTGACGTCTGTTTATCCTGCCGTCCGCCTGCCCCCGCTGATGCCACCCGCCCTCGGACTTCTACCCTCGGACCACGTCTTCCTGGGTAATATGAAGCAGCATATGTTGACTCACAAGATTCGCGATATGCCGCCACATCTGTTCAGCGATCCAAAGCATCaacagcagcagcagcagcagcagcagcagcaacagcaagaACAAGAGACTTCCAGAAGTCCAATGTGCGTCGATGATTCGAGCCTACCGCCCCCACCTCCACCACCTCCACCACCCCCGCCAATGCCACCGACGTCCATCGAGTCCACAATACCGGTGAAAAGATCGCCGGAAGGAGATCTGCCAGCACCGAAAAGACCAGCTAGCCTGCCGAGCAAGCATTTGTGCCAGATTTGCAATAAGAATTTCTCCTCGTCTTCGGCGCTCCAGATCCATATGAGAACTCACACTGGTGACAAACCATTCCGATGCACCGTCTGCCAGAAGGCGTTCACCACCAAAGGCAACCTCAAGGTACACATGGGTACTCACATGTTCACCAACGGAACATCACGCCGAGGTCGACGGATGTCATTGGATATACCTCCCCTGCCAATCACGCCCAAGGACTCGGAGTTTCTGCAAAGACGACCGGATCTTTTTTACCCGTATCTTCCCGCGCCATTCCTTAACGGCGTCCAGCAAAAGCTGAACGAGATTTCGGTGATTCAAAGTAGCAACGGATTACCGCCCCATTCCTTAAGCGCGGGCAAATACGCGGCAAGTCTATTCGGCTCGGTGTATGGTGCTGGCGGAGGTGGCTTCTCCTTGGATAAACCGATGGGGCCAACCAGTAACGGACCTCTAGTGGATGGCAAGTCCGCGATACCCTCGGGATCCATGCTCTTCCAAACACCATCGCCCTCGCATTCGCCTGGCGCGTCGTCCAATGGTGGTAATCAGACGTCTGCTAGCGTGTCTTGGACCGGTGATACTCTTCAGCATCATTTCGATCGGGAAACACCGAGCAGAACCGAGAACGACGCCACACCACCCACAGCACGGTTACCACCGCCACCAGCGAGAGGAGAGGGATTAGCCGCGTGA
Protein Sequence: MSRRKQARPSRAHLEEDLVQRPLLTNPIGTVAGNIREENDFTSDGEESGGGGGGGEEAVDLTATRSHQGDDDPMEEDEEEGIDEQDEQDEDEEGSRKQIHHRQDAENNNNFVESGLPTAIFPPAGTSHVTLEALQNTKVAVAQFAATALTGADSEAALQDLAFLENTLCTLQNQQVLQLQLIRQLQQQLLITHGQSVMQSSTESTDNKEASSSPIIHPKPLSSLASPPSSRPPSHHQQTSPAPLTPNLLQERPTSTSSASPLNLPLSSSGTTSTVITTTSSQMPMPHQIPHCSISASLASSIITNTDPPPLHEPNTLDILQKRTQEVLDNASQGLANNLADELAFRGKGSRLSPYDSKSSGGRGEPFFKHRCRFCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHTAKFPHVKMNPNPVPEHLDKYHPPLLQQIASGRPMPSPPPPPPPSSHHPSFHPATTHGFLPPQPPIPLSLTLSNMTPLYRSPVINHRDDQDVPENLSKPITTAPQTSPTSPAAVLNSRHSFHDNLHQQHQKQQLEQREEIKLEQRSPGQEQYQRPMSREGAERITPKREPEEAEEVAEEESEDFEDTTRRYLNSPQSANPPSQPQTYEDCSMDSKISGRLEGDGEMEVDEEIEEQPENLSSRGTINRLPQQIVTYPGASPASSSASSGSLQTSFAGILFPGPPAHHQIPHLPVSTQTGPIMASGNEMIDPAKDPAIYSTLLPRPGSNDNSWESLIEITKTSETSKLQQLVDNIEHKLSDPNQCIVCHRVLSCKSALLMHYRTHTGERPFKCKICGRAFTTKGNLKTHMGVHRAKPPLRVLHQCPVCHKKFTNSLVLQQHIRLHTGEPTDLSPEQIQAAEVNEFPPGYHPLASFLPQGFPPIHPTSTGFSLGFPPSRQTAIEQQLQESDIETKEESQQRQRFMEEHSEEMEDQEDEEQDHREDDDRCELNRDRRSVEIEEEQDHESEDTTEHKDVTLPIFSTSLAALENQVRTITTTAATTNVARSPSFHRYNGSEKSTSPPTSGAPLDLTPRASSTPASVASASPTPPPQTTPHHPPNPFGMFAGLLQAVSSTPATSTIGTSNINSITSMNAVNPGNGPGTGPLASLTTSAVLAASSTYNPLGLAVGGPAVRGNTTCKFCYKTFACQSALEIHYRSHTKERPFKCTICDRGFSTKNDDSGQQVCSCADQPFAAKGPILPQPNSQYRSYPAKSAAGNSEKPKRRRRRPEERKNRGRTGTGGGRRLTSVYPAVRLPPLMPPALGLLPSDHVFLGNMKQHMLTHKIRDMPPHLFSDPKHQQQQQQQQQQQQQEQETSRSPMCVDDSSLPPPPPPPPPPPPMPPTSIESTIPVKRSPEGDLPAPKRPASLPSKHLCQICNKNFSSSSALQIHMRTHTGDKPFRCTVCQKAFTTKGNLKVHMGTHMFTNGTSRRGRRMSLDIPPLPITPKDSEFLQRRPDLFYPYLPAPFLNGVQQKLNEISVIQSSNGLPPHSLSAGKYAASLFGSVYGAGGGGFSLDKPMGPTSNGPLVDGKSAIPSGSMLFQTPSPSHSPGASSNGGNQTSASVSWTGDTLQHHFDRETPSRTENDATPPTARLPPPPARGEGLAA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00417805;
90% Identity: iTF_01421750;
80% Identity: -