Tzet000933.1
Basic Information
- Insect
- Trachymyrmex zeteki
- Gene Symbol
- -
- Assembly
- GCA_001594055.1
- Location
- NW:328006-332514[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 7 6.5e-06 0.0046 16.2 3.9 5 44 19 58 17 58 0.93 2 7 4.2e-05 0.03 13.6 1.0 3 43 74 111 73 112 0.94 3 7 1.8e-05 0.013 14.8 4.7 6 44 187 223 183 223 0.91 4 7 4.2e-05 0.03 13.6 1.0 3 43 239 276 238 277 0.94 5 7 1.8e-05 0.013 14.8 4.7 6 44 352 388 348 388 0.91 6 7 3.9e-05 0.028 13.7 1.8 3 43 404 441 403 442 0.95 7 7 7.3e-06 0.0052 16.1 4.2 6 44 517 555 512 555 0.91
Sequence Information
- Coding Sequence
- ATGGCAGAGACAGAAGCAGGAGACAATTTGATTCCAGTTCGTCGTTGGATCCGTAGACATTACACGAAATTGACAAGGAGTAGCGAAGCAAGATGCAAtcattgtaatgaaaaatttagtatacATCTAAAACGCTTAGCTACTTTATATAACCACTTGATAGAAGGACATCCAGACAAATTaatagaagaagaaaagaatgaaGTTAAATTCCATTGGGCTTGGGACTATTATATCGTAAAAAGCAGTACAGAAGCAACATGTAAACAATGTAAAGTAACAGTGAGATACAAGCAAGTAAATGaattgaaaatacatttaaaaagaattcacGGgATGTCAGGTCCAACTTCAGATAACGTAATAGATAACGAAAGCAGTTCAGATGAAGACATGGATGCAAACAAGGACGTAACTCTAAGAAAAGCAACACGTCAAGATACTTCATCGAACTTAACAAACTTATCCGACAGTTTAAACGAATCTACAGAAGGAATAAAAGGacttaataaGGAAGCACAAAACGATTTCGTACCGGTTCGGCTCTGGATGCGTGCACATTACACAAAATTGAATAACGAAGCAAGATGCATTCATTGTaacagaaaattcattatacatattaaaaagttatctgGTTTGCATAAGCACTTGGTAGAGTCACATCCAGACAAATTAGcggaagaagagaagaatgaAGTGAAATTCCAATGGGCTTGGGACTATTATATCGTAAAAAGCAGTACAGAAGCAACATGTAAACAATGTAAAGTAACAGTGAGATACAAGCAAGTAAATGaattgaaaatacatttaaaaagaattcacGGgATGTCAGGTCCAACTTCAGATAACGCAATAGATAACGAAAGCAGTTTAGATGAAGACATGGATGCAAACAAGGACGTAACCCTAAGAAAAGCAACACGTCAAGATACTTCATCGAACTTAACAAACTTATCCGATAGTTTAAACGAATCTACAGAAGGAATAAAAGGacttaataaGGAAGCACAAAACGATTTCGTACCGGTTCGGCTCTGGATGCGTGCACATTACACAAAATTGAATAACGAAGCAAGATGCATTCATTGTaacagaaaattcattatacatattaaaaagttatctgGTTTACATAAGCACTTGGTAGAGTCACATCCAGACAAATTAGCGGAAGAACAGAAGAATGAAGTGAAATTCCAATGGGTTTGGGACTATTATATCGTAAAAAGCAGTACAGAAGCAACATGTAAACAATGTAAAGTAACAGTGAGATACAAGCAAATGAGAAGTTTgagaaatcatttaaaaagaattcacGGgATGTCAGGTCCAACTTCAGATAACGCAATAGATAACGAAAGCAGTTTAGATGAAGACATGGATGCAAACAAGGACGTAACCCTAAGAAAAGCAAAACGTCCAGAAGCTTCATCTAACTTAACAAACTTATCTGACAGTTTAAACGAATCTACAGAAGGAATAAAAGAAGTTAATGAGGAAGCACAAAACGATTTCCTCCCATTTCGGCTCTGGATGCGTGAACATTACACGAAATTGACAAGGTGTAACGAAGCAAGATGCAAtcattgtaatgaaaaatttaatatagatgtACATCAGTTAGCTGCTTTACATAAGCACTTGATAGAAGCACATCCAGACAAATTAGcggaagaagagaagaatgaAGTGAAATTCCATTGGGCTTGGGACTATTATATCGTAAAAAGCAGATACTCGGTCCCCGGTTCAGATAATCACATGGATAATGAGAACAATTCCAGTAATTATGTGGATGCAGACAGGAATACGACTATAAAGGAAGCAAAATATCAAGAAGACTTATCTAACTCAATTGGTTCATGTAGCATTTCATATGAAAAAACAGGAGGAACAGAATGTCTTAacgagtaa
- Protein Sequence
- MAETEAGDNLIPVRRWIRRHYTKLTRSSEARCNHCNEKFSIHLKRLATLYNHLIEGHPDKLIEEEKNEVKFHWAWDYYIVKSSTEATCKQCKVTVRYKQVNELKIHLKRIHGMSGPTSDNVIDNESSSDEDMDANKDVTLRKATRQDTSSNLTNLSDSLNESTEGIKGLNKEAQNDFVPVRLWMRAHYTKLNNEARCIHCNRKFIIHIKKLSGLHKHLVESHPDKLAEEEKNEVKFQWAWDYYIVKSSTEATCKQCKVTVRYKQVNELKIHLKRIHGMSGPTSDNAIDNESSLDEDMDANKDVTLRKATRQDTSSNLTNLSDSLNESTEGIKGLNKEAQNDFVPVRLWMRAHYTKLNNEARCIHCNRKFIIHIKKLSGLHKHLVESHPDKLAEEQKNEVKFQWVWDYYIVKSSTEATCKQCKVTVRYKQMRSLRNHLKRIHGMSGPTSDNAIDNESSLDEDMDANKDVTLRKAKRPEASSNLTNLSDSLNESTEGIKEVNEEAQNDFLPFRLWMREHYTKLTRCNEARCNHCNEKFNIDVHQLAALHKHLIEAHPDKLAEEEKNEVKFHWAWDYYIVKSRYSVPGSDNHMDNENNSSNYVDADRNTTIKEAKYQEDLSNSIGSCSISYEKTGGTECLNE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -