Basic Information

Insect: Trachymyrmex zeteki
Gene Symbol: JARID2_1
Assembly: GCA_001594055.1
Location: NW:11777-20793[-]

Transcription Factor Domain

TF Family: ARID
Domain: ARID domain
PFAM: PF01388
TF Group: Helix-turn-helix
Description: This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 3.5 5.3e+03 -2.8 0.1 57 82 151 178 134 180 0.59

2 3 1.6 2.5e+03 -1.8 0.0 38 65 1097 1123 1090 1134 0.81

3 3 4.9e-23 7.5e-20 70.4 0.0 6 89 1341 1422 1337 1422 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	3.5	5.3e+03	-2.8	0.1	57	82	151	178	134	180	0.59
2	3	1.6	2.5e+03	-1.8	0.0	38	65	1097	1123	1090	1134	0.81
3	3	4.9e-23	7.5e-20	70.4	0.0	6	89	1341	1422	1337	1422	0.94

Sequence Information

Coding Sequence: ATGGTTTTAAGTCGCAACgataaaagaaagaggaaggaGGGAGATCTGGTGGACCTCATGGAACCACTTTCTGAATCTCCAAAAAGgACCAAAGTTCATGCACAAAGAAAATTTGCACAAGGTGCGATCACAGTGTTTAATACATCACCTACACCTATTAAGGACAAAGAGAAAGCCAAACCTGCTACAATCACAGAATTAATAACTCACAAACGACCAAATACGGaggattttttaacatttttatgctTCAGAGgAACATCTATTTTGCCacctaatttaaattttttcaatactggtaacaaaaaagagaaacaagGATCTAAGCCAACTCAAACTTTTATAGAAAAGACGTTGTCCTCTACTAGTACTTTCATAGAGATTCAGAAGCAAGAAAATACAtgccaaaaaaatttaacaaaagtaaAGCCTATtgtttcgaataaaaaaaaagtgactaGTGCATTGCACAAAAGTATTACCAAACTTAAGACGACTACATCTACGGTTCAAGcacttaaaaagaaatatcaggAACAACGCCTTGCTAAGCAaagaatcaaaaataaatttaaagctaCTTGCGTTATGAAAACAAGATCATGTACAGAGAGATCTATGTTGAAGGCTGGTCTTAAGTTGGCCCCGCGAAAATTTTTACCTAAAATCAAGACAAAGAGGCATGGCCTAAGAAGTAGTGTATTACCAGAGAAAACCAGTAAACCTCTATCAAAAACAAAAGTTACGTTACCCAAACCAAAGAAGAAAGTCAatctaaaatcgaaaaatagtGATACTTCAAATACAGATGCGTCATCCGAAGAAGATAATGATGTTAATGACAATGAAGGGGAAGAATTACATATGGAGAAATCAACATCACAGATAAAGCGAAACATACAAAGAGGCATCCAAAAAAAGATTTGCACTAGAAGTAAGTCAGAGATGAGAAGAGTTACAAGATCGTCCAGTGGCATAGTCTCTTCACAAAATCTTTCCAGAAGACCTACCAGAAAAACAAAGGAAGCAGCTGCTGTATATATGGAAATTCTTGGGAGAAAACTAGTGAGCCCGGATTTAGAAAATGACGATAACGTTTCATTTGAAAGCTTTCCCGAGCTGCCAAATGCTCGTAGAGTAACGCAAACGGAGAACGAGCTTAAAGCCaaagtaaaacaaaatagtATCAAgactattattaaaacttcTCCCAAGGATTCTAAAGTTAGTTCCTACAATAGTAACGCTAATAAGCGATTggataaaagcaaaaataataaactgatTTTAAAGAGCAAACGTCTAATGAGGGTACAGAAATATTGCGAAGAGGATAGTGACGAAGAATCTGAGAGCTCAATAGAAACGAACAATTCAAGACCTATTACCAGACAGAGTCTTGGAAAGATTGATAAACCAAGCAGGAGCCTTAGATCATCCTCCAAAAACACAACTATACAAACAGAGATACAAAGTAACGTAAATAGCAAATCGAAGATTCAAATTCAAAATTGTGTGAAATCAGCTAGGGaaaaatttgtgataaaacgtaaacgcgaaaaaaatatatgtaaaacgtCGTTGGGTAAGATTAAGCAAAAGAGCCTTAAAAGTAATCAAAACGAGAAGGGGGAATCAGAAGAGGAGACGTTAGGAATGCTgctcaataaaataaagaaaaaaaaagataacgaggaagaagaggaagggCAAATCCCTGACAACAACCTGATCAACAATCTGAAAGATAAAAAGGCAGCTTGCAGTGACATACAAAAAACAACCGATCTGTCGAAGGTATCAGACGATGAGGAATCTTTTCGAGGGTTTACTAAGAAGGCGATATCAAAAGTTTTGAATTCATGTCAGACACATGCCAATGTTAATTTGCTAGTCACAGAATCCGATAAAAAGTTGAATTTACCCCAAACATTGGATGTATCGCAAACAGCGAATCAAAGCGCCATTTtacggaaaaataaaatagaagcaTCATCGATTAAAAACGATTTCCCGATTGCAAATCCGCTGAACAGTGAATGCGATTTGTCTGTACGGGAAAAATCTGTATTGGATTTGTCCATCAAGACCCAAAGCTTATTGTTGCCATCTGTAGAACAGacgaacaaaaaatgtaatcgcGAAAATGAGGTTTCTTCCAACCTTATGCCACTGTCTACTCTGCACACAAGAAAAGAACGAGTGAATATGTCGACTGAACAAATAGAAAAGTGGTTGAATGAAAGTTCATTTGCCAAAGAAGAGAGCAAGCTGGAGATGGAGAACGTTTCTAGTTTTAGGTACGATTCTGCAGAAAAGTTAAAGGCGGATGTCTCGCATTTGTCTATTTCGACGAAAATCCAACATTTGGTACGCCCGGTCAACGTTACGCTTTCGAAATTATCGGATAAGACGAATTTGAAGGATCGTATGGGGATACACAGCAAAAATGTGATATCGGTAACATCCAATATGCGTAATACCGGAGTGAAGCAACAAAATGCAATTGTTGACAAAAATAAGAGCGCTATCGAAACGAAAGAGATTGTCAAGAATAAAACTGGAAAAACGAACAAAGATACTTGTTTTGCTGAAGATATTAGCGACACTGTGTCTAAAACGGATCAAAACTCAGTGGATGATGCTGTAGAGAAGAAATCGCCGacagagaagaaaatatttcaaccgCGGAAACCTTTTTTGCCCAAGGTTAAGGAACGTAAAACTGTAATACCGAATGCGAACGCGTTTTCGCCAGAGAATGAGAGCAGCGTTTACGCGTTTGAAAGTGACACCGAAGTTCCTGTTAGTACACCCTTCCGAAGAAAGATCAGAGATAATGCAAAACGCTCGATTGCAGTAACATCTACAGAGGCTATAATATCTGAGTCCAAAGTAATCACTAACAAATCAAGTTTGAAGGATTCTGAACCATTGGATAGTAAGGAGAAATTGTCGAACGATCCCGTAACGACTGTAAAGAAGAAACAAGAGTCGCAAGAACCGAAGAACGTAGCAAATACAGCTACAAGCGTGGGCAAGTTTGAATTGCCCAACAATTTTGCAAGCTTGACCACTGTCCAAGTGCTACCACTCGACAAACTCACGACAAGTTGGAGCAACGTAAATTGCAGTGCTTCCATAGCGGTGCAGGTGAATCTCGACGAGACTACGCAGGAGCTCGAAAACAATACGAGTCAACAGAAAAGTACCGAGATATCTACTCAAACTGAAATGAGTAACGAGaatgacgacgacaacgatggacatctattttatattccgTTACAAGCTGTTACGAGAGGCGGCCCAAATCTGGTACAAGGTCAACAGTTAATACAGGGTGTAGCTGTTAAACTCGGTACGGAAGGACCGACCGGTCCTAATCAAAGAGTGCTCCTTCGAGCTAAGTTGGTCACTAAGCCACCGTTATCAGTGGCACGTTGTCCACCGATAGGAACAGTACAACCGACAACGCGCACTCCACCTAATCCTGCATCAATGACGATGGAACAGCAAATACCATCAACGTCAATGACCGCAACTGTGTCAACCACGATTGCAAGTATGTCGAACGTCGAGATGCAATCAACGTCATtactgaaaaatgaaatacctGCACTGCCAAGTCTGATTCGTCAAAATGTCAGTACGATCATAAATAGCATGGGAAAGAAAAGCTTCTATAGATTCAACAAAAAgATACAAATGAAATGCAAACAAAAGGGATCGGAATTGTGCTCTTCAAGCAATAGTACGACGTTTTTAGGCGCGAAAATCGCTAATAATGAAGCTCGCGTAGTCGAGGCGCCAACGTTTCATCCGACAGAGAAAGATTTCCAGGATCCATTGGAGTATATAGATAAGATAAGGCCAATCGCTGAAAAATTTGGGATATGTAGAGTGGTGCCTCCACCAAATTTCAAGccaGAATGCAAAGTGTCTGATGATATGAGATTTACCGCTTATAATCAATATGTACATCGCATGCTGCACAGATGGGGTCctaatgtaaaagaaatgatggctatcaagaaatatttagCTACTCAGAGTATTACTTTGACTCAACCACCATGGATTGGTGGAATGGAGGTAGATTTACCACACTTATATCAAACAGTTCAAAGCTTGGGTGGATTGAAAGAagtaattgagaaaaaaaagtggcAAAAAGTAGCAGATGGTATGAAAATACCCAAATCAGCACAGGATCGTGTTACTAAATTAGatgatatttattgtaaatatttattgccaTATGATACGTTATCCCcagaGGAACGTGGAAAGTTGTTTGACGAAGTTGAAACTGAATGGATAAGAAAAGAAAGCAAAGCCTTGCAAAGACAAGAAGTGTCATCCAATGATAACGATGAGGAAGAGGATGAAGACAGTTCTGACGAAATTGAAGAATGTATCGTAAAAGGAAGAAATATGCCATTGAACGCTTTTTACCGAATTGCTCGTAATACTCAACGTATGTGGTTTGGTGAAAATCAACGAGGAAATGAAACCGAGGGTGCTTCCGCCAACGAGGTAGAGAGTGCATTTTGGAAACATGTTGCCGAGAGAAAACGTCATGTCTGCGTACATGCAGCAAGCATTGATTCGAGCGGTCGTGGATTTGGATTTTCTGTTGCAAAAAACAGTCCGTTTGCTAGACATCCTTGGAATCTTAAAGTTCTCACTAACAATCCTGGATCAGTATTAAGAGCTTTAGGTCCACTAATGgGTGTGACCGTACCAACATTGCATGTGGGTATGTTATTTAGCGCTTGTTGTTGGTATCGTGATCCGCATGGTCTACCATGGATAGAGTATCTACATACAGGTGCCAAAAAAATTTGGTATGGAATACCTGACgagcataataataatttccgaCAAGCGCTCTCGAAAATGGTACcacaatattgcaaaaataagaCTATATGGTTACCTTCTGATACTGCTATGGTTCCGCCGGAATTATTAGTAAACAACGATGTACCATTATGTCAGACTGTGCAAGAGCCGGgacaatttataatagtatttcCAAAAGCGTTCACATCAAGCATATGTACTGGTTACGTTGTATCTGAAAGCGTATATTTCGCACAACCATCCTGGTTAGAAACTGCAGAACAAGTATTTAAGgatATACAAGATAGTTGCGAACCTTCTATCTTTTCATTTGAgagattgttatttaatattattaatgatacgAGATCGCACATAGATATATTGAAACAGatattgccGAATGTAATGAAGATTTGTGAAAAAGAATTAGATTATCGTAAACAGCTGGAAAGTGTAGGTCTTATCAATAGAGAAAGATTGCCTTTACCAGTTAGtggaaaaggaaagaaagggaaaaagGTGAAAGATGATGATGGCGACTTTGAATGTGAGACATGTAGAGCTAATTTGTTTGTCTCTTTGGTAAATAATTCGCAAGATGACAGCGTTTATTGTTTGCCGCATGCCTTGCACTTAATTAGTTGTAAGAAGCAGGTTTTGAAACATTGTACTCTCATGTACACGTATGCTGAAgACGAATTAGACGAGTTGGTTCACAAACTGGAAAACAGAATTGAAAccaaatctaaaaaaattaatcaaataaaacaaagtaagcaagaaaaataa
Protein Sequence: MVLSRNDKRKRKEGDLVDLMEPLSESPKRTKVHAQRKFAQGAITVFNTSPTPIKDKEKAKPATITELITHKRPNTEDFLTFLCFRGTSILPPNLNFFNTGNKKEKQGSKPTQTFIEKTLSSTSTFIEIQKQENTCQKNLTKVKPIVSNKKKVTSALHKSITKLKTTTSTVQALKKKYQEQRLAKQRIKNKFKATCVMKTRSCTERSMLKAGLKLAPRKFLPKIKTKRHGLRSSVLPEKTSKPLSKTKVTLPKPKKKVNLKSKNSDTSNTDASSEEDNDVNDNEGEELHMEKSTSQIKRNIQRGIQKKICTRSKSEMRRVTRSSSGIVSSQNLSRRPTRKTKEAAAVYMEILGRKLVSPDLENDDNVSFESFPELPNARRVTQTENELKAKVKQNSIKTIIKTSPKDSKVSSYNSNANKRLDKSKNNKLILKSKRLMRVQKYCEEDSDEESESSIETNNSRPITRQSLGKIDKPSRSLRSSSKNTTIQTEIQSNVNSKSKIQIQNCVKSAREKFVIKRKREKNICKTSLGKIKQKSLKSNQNEKGESEEETLGMLLNKIKKKKDNEEEEEGQIPDNNLINNLKDKKAACSDIQKTTDLSKVSDDEESFRGFTKKAISKVLNSCQTHANVNLLVTESDKKLNLPQTLDVSQTANQSAILRKNKIEASSIKNDFPIANPLNSECDLSVREKSVLDLSIKTQSLLLPSVEQTNKKCNRENEVSSNLMPLSTLHTRKERVNMSTEQIEKWLNESSFAKEESKLEMENVSSFRYDSAEKLKADVSHLSISTKIQHLVRPVNVTLSKLSDKTNLKDRMGIHSKNVISVTSNMRNTGVKQQNAIVDKNKSAIETKEIVKNKTGKTNKDTCFAEDISDTVSKTDQNSVDDAVEKKSPTEKKIFQPRKPFLPKVKERKTVIPNANAFSPENESSVYAFESDTEVPVSTPFRRKIRDNAKRSIAVTSTEAIISESKVITNKSSLKDSEPLDSKEKLSNDPVTTVKKKQESQEPKNVANTATSVGKFELPNNFASLTTVQVLPLDKLTTSWSNVNCSASIAVQVNLDETTQELENNTSQQKSTEISTQTEMSNENDDDNDGHLFYIPLQAVTRGGPNLVQGQQLIQGVAVKLGTEGPTGPNQRVLLRAKLVTKPPLSVARCPPIGTVQPTTRTPPNPASMTMEQQIPSTSMTATVSTTIASMSNVEMQSTSLLKNEIPALPSLIRQNVSTIINSMGKKSFYRFNKKIQMKCKQKGSELCSSSNSTTFLGAKIANNEARVVEAPTFHPTEKDFQDPLEYIDKIRPIAEKFGICRVVPPPNFKPECKVSDDMRFTAYNQYVHRMLHRWGPNVKEMMAIKKYLATQSITLTQPPWIGGMEVDLPHLYQTVQSLGGLKEVIEKKKWQKVADGMKIPKSAQDRVTKLDDIYCKYLLPYDTLSPEERGKLFDEVETEWIRKESKALQRQEVSSNDNDEEEDEDSSDEIEECIVKGRNMPLNAFYRIARNTQRMWFGENQRGNETEGASANEVESAFWKHVAERKRHVCVHAASIDSSGRGFGFSVAKNSPFARHPWNLKVLTNNPGSVLRALGPLMGVTVPTLHVGMLFSACCWYRDPHGLPWIEYLHTGAKKIWYGIPDEHNNNFRQALSKMVPQYCKNKTIWLPSDTAMVPPELLVNNDVPLCQTVQEPGQFIIVFPKAFTSSICTGYVVSESVYFAQPSWLETAEQVFKDIQDSCEPSIFSFERLLFNIINDTRSHIDILKQILPNVMKICEKELDYRKQLESVGLINRERLPLPVSGKGKKGKKVKDDDGDFECETCRANLFVSLVNNSQDDSVYCLPHALHLISCKKQVLKHCTLMYTYAEDELDELVHKLENRIETKSKKINQIKQSKQEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01423428;
90% Identity: iTF_00015841;
80% Identity: -