Basic Information

Insect: Trachymyrmex septentrionalis
Gene Symbol: ct_1
Assembly: GCA_001594115.1
Location: NW:1353668-1495054[-]

Transcription Factor Domain

TF Family: CUT
Domain: Homeobox|CUT
PFAM: PF02376
TF Group: Helix-turn-helix
Description: The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 5.9e-28 3.1e-24 84.0 0.0 2 72 560 631 559 636 0.95

2 3 1.4e-32 7.5e-29 98.8 0.0 3 77 969 1044 967 1046 0.96

3 3 5.9e-31 3.1e-27 93.6 0.0 3 75 1204 1277 1202 1281 0.95

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	5.9e-28	3.1e-24	84.0	2	72	560	631	559	636	0.95
2	3	1.4e-32	7.5e-29	98.8	3	77	969	1044	967	1046	0.96
3	3	5.9e-31	3.1e-27	93.6	3	75	1204	1277	1202	1281	0.95

Sequence Information

Coding Sequence: ATGCAGGCCTCCGCGGAGGCCAACTCGCGGAATATAACGACCATGGAATGGCTCTACAAGAAGGAGCCCTTATTCACGCTTGCTCACTTCTGGCAACAGAGAGCAACTTCGGCGGAGAAAGAAATAGCCGCGTTAAAAGAACAGCTCGCCGCAACGAATGACAACAATTCTAAGACTGAGGGACACCAATTGTCTCAGCCTCCGCAGGGAAGCGATCAACAACAGGTACACGATGCCAGCAATCCCAGAAGGACGCCGAACAGCAACCTCGAGCAGGAGCTGCAGGCCAAAGACAAAGAGATCAACCAGTTGGTTGAGGAGGTGTCCAGGCTACAGCAGAGCCTGCAACGCCTTCAGGAGACAAGTGCGCAAGCAACGGCGCGGCTTGAGGAGGAACTTGAAGTGCGCAGGCAGCACATCAACAGATTGGAGAGCAAATTGGAACGGCAGAGGGACTATGATGATCTGAAGCGCGAAATCAGTGTATTAAGATCAGTCGACCTTTCGCAGATACCAACTGGCGAACCTGGAAAGAGCTTGGAACATCTTCTTATGGAACGTTTCAAGGCGCTCCAACAAGCCGAAAACTTGAAACCCTCCAATACACCCGACGCACTCGGTGGATTATCGTCACCCCTGCAGCGCGCCTCGACCGCCTCGCCCCACGGGGTCGGAGGTGTGCCACCTACGTCCCATGTGTCCTCCCAGCAACCACCGCCACCGCCTCCGACAGCAGCCTCTGTCCCTCCACGTTCCACCCCGACGCCCTCTTCGGCCACTTCGACGACTTCAAGCCTCCTCTTCCCGCCACCCCTCCAGAACGTCGAGACCTTCGGCTCGTTTCTCGGTGAAGAAATCGTAGCCAATTGGAGGCGGACATTGGAAAGGTCTATCATGAgccaacagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcaacagcaacaacagcagcaacaatCACAGCCATCTCAACTAAGCCAATTAACTCAACAGCAACAACAATTACAACCCCAATTACAAGCCCAACCGCACATGGGTTTACACCCGCCAACAACGCCAAGTAGTTTAAATCATCTTCCATCGCCGGGTGCGGATCCATCGTCCACTTCAAACACTCCGGTGAAATCGAACACACCGATCGGTACAATATCCTTGGGCGGTTTAGATGTCACTGAGAAAGCGCCAACGCCAGTATCAGGACATGAAACACCAGCCCCTCCAACACCATCCTCCACAACCGCCTTGACATCGCCGCCGAGCTTCCAGCCACCGACGTCAATGGTGGAAACTAGTACCCCTTCAGCTTCCATCAATGGCAGCGGTCTCACGCCCGGCGTACCAAGTGCACCGCCCCCGAAGAGTCCGCCTGATCAAGAATCATgtcacaataataataatagccaTCATCTAGCAAATAACAATATCGGCGGACTAAGCGTTCTCGATACGCTGAAGAGTCCGTTTCGGTTTGACGATCGAACGTATCCCTTCCGATTCGGCGACGAGTTCGGTGCCGCCGGTATGGCCGGTCGGCTGGGCGAGTCCCTCATTCCAAAGGGAGATCCTATGGAGGCGAGACTGCAGGAAATGTTACGTCATAATATGGACAAGTACGCCTCACAGAATCTTGACACTCTTCATATAGCCAGGCGGGTGCGCGAACTATTGTCGATACACAATATCGGTCAAAGACTATTCGCCAAATATGTTCTCGGACTAAGTCAAGGCACGGTCAGCGAGTTACTTAGTAAGCCCAAGCCATGGGACAAGTTAACTGAAAAGGGCCGCGACAGTTATCGGAAGATGCACGGTTGGGCTTGCGACGAGAACGCCGTGATGCTGCTCAAGTCCCTCATCCCCAAGAAAGAGTATGTTTCAGGCAAGGAACAAGGAATGCCAGCGTTCGCACGTGGACCACAGGATAGTGGTCCGCAAGAAATGAGTGATGAAAGATTGGCACATATTCTGTCGGAATCAAGCCATATGCAAATGAGAGGTGAGCACGAAGTATCGAACGATGCTGACAGCAAGAGTCCGAACAGAATCGGTTGCCCGAGTCCGTTCAACAAAGACAGACTGGACAGCCAAAATAGGAGACTGAAGAAGTACGAAAACGACGACATTCCCCAGGAGAAGGTAGTAAGGATTTATCAAGAAGAACTGGCTAAGCTGATGGGCACGAGGGTGGAGAATCTTCGTCCGCGAGAGTTCCCTAGCGCGATCTTTCCACATTTTTTCAGTGGTACGCAGAGCAGTCTTCAAGGTATCGAGCGCACCCAGGAAGACATTCGATTAGCATTGGACGCTTATCACCGTGAGCTCCAAAAATTGAATGCCGCACCAGGTCAGAATCCCTCGATGACTGGACTGCCAGGATTGCCTGGATTACCAGGTTTGTTGGCGCTTCAGCAACAAGCTCTTCAACAACATCATCTAGCAGCGAATGGCGGCGGTGGTGTTCAGGATTTGAGTTTAGGCAAAGTGGATCCGcgcaataaaatgataaatggtgtgtcagaagaagaaaaagagaagatggAAGAGGCGATGAGACACGCCGGAAGTGCATTCTCTTTGGTGAGGCCGAAGCAAGAATCGACAGGTCCTCAATCGACGCCTGGCGGTTCTAGCGCAAGTTCACCGCTTGGCAATTCCATACTTCCCCCTGCGATGACACCCAACGAAGAGTTCTCCAGTGCGGCGGCAGCCAGTCCTCTTCAGAGAATGGCCTCCATCACGAACAGTCTGATAAGTCAACCGTCCACCCCAACTCATCATTCGGCCAATCAAAGACCGCTGAAAGCTGTGCTTCCTCCGATCACGCAGCAGCAATTCGACCTGTACAATAATCTTAATACGGAAGATATTGTGAAAAGGGTGAAGGAACAGCTGTCTCAGTATTCAATTTCGCAACGGCTATTCGGCGAATCAGTATTGGGTCTATCTCAGGGATCAGTGTCAGACCTCCTCGCGCGTCCAAAACCATGGCACATGCTGACCCAAAAAGGTCGTGAGCCCTTTATCCGGATGAAAATGTTCCTCGAAGATGACAACGCGGTGCACAAGCTCGTCGCCAGCCAGTACAAGATCGCCCCGGAGAAGCTAATGAGGACCGGCGGCTACGGCGGCCTGCCTCGTAAGTTTAACTCAGcTTGCGGAACACCTATGAAACCTATGCCACCAACAAAACTCGTCCAAGAACAGCTTCAGAATGCAGCGAAGGCGCAGGCCGCCGCTCAAGCAGCCGCACAAGCAGCGGCGGCGCAACAGCATCAGCAAGAAAATCAGATGCAACTCGGCCCGCCACAACAAAGTCCTCAACATCCACAACATCCACAACATCCACAGCCGCCACCACCGATGATGTTGACCCCACCTGGGCCTCATCATCCTCATACTCAGCTCAGCATGCAAGAACTCCAAAAGaaacaacagcagcagcagcaacaaatGTCATTACACTCGCCACATCATCAGATGGCACCGTCGCCTCTTCGAAGTCTTCATCCTCACATTTCACCAAGCGTATACGAGATGGCTGCCCTTACGCAGGATCTCGACACACAGACAATCACAACAAAGATCAAGGAAGCGTTATTAGCTAACAATATCGGCCAGAAGATCTTCGGTGAAGCGGTTCTCGGTCTGTCACAGGGCTCGGTCAGCGAGTTACTGAGCAAACCGAAACCGTGGCATATGCTCAGTATAAAAGGTCGAGAGCCTTTCATTAGGATGCAGCTTTGGCTGTCAGATGCACACAACGTTGATCGATTGCAAGCGTTGAAGAATGAACGACGAGAGGCGAACAAGAGACGACGTAGTAGCGGTCCCGGTCACGATAACAGCTCTGATACTTCGAGCAACGACACAGCTGAATTCTATCACGCGGCATCACCTGGTCCGGGACCTACTACCGGGAAGAAGCAGCGCGTTCTTTTCTCGGAAGAACAGAAAGAAGCTCTCAGACTCGCTTTCGCCTTGGATCCTTATCCCAATGTGGCTACAATCGAATTCCTCGCTGGTGAACTGGCCCTGTCGTCGAGAACGATAACAAACTGGTTTCACAATCATCGAATGAGACTGAAGCAACAAACACCGCACGGTCAACCGGAACCGCAGTCGCCGCGAGAACCTGGTCAACCGTTCGATCCTGTTCAATTCAGACTGTTGTTAAACCAAAGACTGCTGGAGATTCAAAAGGAGAGATTGGGTCTAGGAAATGTACCTTTACCTTACTCTCCGTACTTTAATCCCAACCTGGCGGCCCTGGTAGGTAATGCACTGAAAGAACAATGCTCTGGTCTGGACCTCTCGATGAATGCTCTAAAGAGAGAGCCCAATCAAGAATTCGAAGATGAAGATGTCGACGATGCGATGAGTAATCTAGGTAGCGAGGACTCGGAAGGTTCAGCCAGTAGTATAAAGAGAGAACCTACAGAAACACCGACGGCACCCACGACGGTCAGGTCCAATAGAAGAAAACCCGCGGCACCGCAATGGGTGAATCCGGAGTGGCAAGAACCAACGAGAACAGGCGACGAAGTTATCATCAATGGAGTTTGTGTGATGCAGACGGACGATTATGGAGTAAAAAGAGAGGCCGAAGAGACCATAAGAGTTGAACCGACACCAGTGCAAGATCGATATGAAGAAGATGCTCAAAGCGATGTCTCTTCCGTGTCTGGCAACAATGGAGCCGATCGGGATAGTCCGCTTCCCAGTCCAAAATCTGGTCAAAACAGTCCAGCGACGTCGCTCAGACCGCCGTCAGCGCAACAGACGCAACAGTCCACGGAGGAAAGTCCGAAGGATGTGGTGAAACACGAACCGGAGGAGACGTGGGATTACTAA
Protein Sequence: MQASAEANSRNITTMEWLYKKEPLFTLAHFWQQRATSAEKEIAALKEQLAATNDNNSKTEGHQLSQPPQGSDQQQVHDASNPRRTPNSNLEQELQAKDKEINQLVEEVSRLQQSLQRLQETSAQATARLEEELEVRRQHINRLESKLERQRDYDDLKREISVLRSVDLSQIPTGEPGKSLEHLLMERFKALQQAENLKPSNTPDALGGLSSPLQRASTASPHGVGGVPPTSHVSSQQPPPPPPTAASVPPRSTPTPSSATSTTSSLLFPPPLQNVETFGSFLGEEIVANWRRTLERSIMSQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSQPSQLSQLTQQQQQLQPQLQAQPHMGLHPPTTPSSLNHLPSPGADPSSTSNTPVKSNTPIGTISLGGLDVTEKAPTPVSGHETPAPPTPSSTTALTSPPSFQPPTSMVETSTPSASINGSGLTPGVPSAPPPKSPPDQESCHNNNNSHHLANNNIGGLSVLDTLKSPFRFDDRTYPFRFGDEFGAAGMAGRLGESLIPKGDPMEARLQEMLRHNMDKYASQNLDTLHIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHGWACDENAVMLLKSLIPKKEYVSGKEQGMPAFARGPQDSGPQEMSDERLAHILSESSHMQMRGEHEVSNDADSKSPNRIGCPSPFNKDRLDSQNRRLKKYENDDIPQEKVVRIYQEELAKLMGTRVENLRPREFPSAIFPHFFSGTQSSLQGIERTQEDIRLALDAYHRELQKLNAAPGQNPSMTGLPGLPGLPGLLALQQQALQQHHLAANGGGGVQDLSLGKVDPRNKMINGVSEEEKEKMEEAMRHAGSAFSLVRPKQESTGPQSTPGGSSASSPLGNSILPPAMTPNEEFSSAAAASPLQRMASITNSLISQPSTPTHHSANQRPLKAVLPPITQQQFDLYNNLNTEDIVKRVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGLPRKFNSACGTPMKPMPPTKLVQEQLQNAAKAQAAAQAAAQAAAAQQHQQENQMQLGPPQQSPQHPQHPQHPQPPPPMMLTPPGPHHPHTQLSMQELQKKQQQQQQQMSLHSPHHQMAPSPLRSLHPHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNVDRLQALKNERREANKRRRSSGPGHDNSSDTSSNDTAEFYHAASPGPGPTTGKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLAGELALSSRTITNWFHNHRMRLKQQTPHGQPEPQSPREPGQPFDPVQFRLLLNQRLLEIQKERLGLGNVPLPYSPYFNPNLAALVGNALKEQCSGLDLSMNALKREPNQEFEDEDVDDAMSNLGSEDSEGSASSIKREPTETPTAPTTVRSNRRKPAAPQWVNPEWQEPTRTGDEVIINGVCVMQTDDYGVKREAEETIRVEPTPVQDRYEEDAQSDVSSVSGNNGADRDSPLPSPKSGQNSPATSLRPPSAQQTQQSTEESPKDVVKHEPEETWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00729955;
90% Identity: iTF_00221825;
80% Identity: iTF_01476828;