Tsep002217.1
Basic Information
- Insect
- Trachymyrmex septentrionalis
- Gene Symbol
- kn
- Assembly
- GCA_001594115.1
- Location
- NW:873268-958305[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-229 1.4e-225 749.3 8.1 39 532 20 501 15 506 0.90 2 2 0.0064 68 0.8 7.8 445 512 465 532 444 552 0.68
Sequence Information
- Coding Sequence
- ATGAGGCAGATACTGAAGGAGGAACCTGTGCCACGTGCTTGGCCGCAGCCCGCGCTCGCCGACAATGGAACGGTTGGCGTGGGCCGGGCGCATTTCGAGAAACAACCACCGAGTAACCTGAGGAAGagcaattttttccatttcgTAATCGCTCTTTATGATCGACATGGCCAACCAATTGAGATCGAAAGGACCTCATTCATGGGCTTCGTCGAAAAGGATCAGGAATCTGAAGGTCAAAAGACGAACAATGGTATTCAGTACAGTCTACATCTGCTCTATTCTAATGGTGTCAGGCAAGTGCAGGACATCTATGTCAGGCTAATAGACTCCGCGACGAAACAAGCAATCATGTACGAAGGACAAGACAAAAATCCGGAAATGTGTCGTGTTCTGTTAACGCATGAAGTCATGTGCAGCCGATGCTGCGATAAGAAGAGCTGCGGTAACAGGAACGAAACGCCCAGCGATCCTGTCATTATCGATCGATTCTTCCTCAAGTTCTTTCTCAAGTGTAACCAAAACTGCCTCAAGAACGCTGGCAATCCACGTGACATGAGACGGTTCCAGGTGGTCATATCTACGCAAGTGGGAGTGGAAGGACCATTACTAGCGGTCTCGGACAATATGTTCGTCCATAACAACAGCAAGCACGGGCGCAGGGCGAAACGTTTGGACCCTAGTGATCCTAGCGAATACAATAgtTTATATCCGCCAATACCTCTCCAAACACCGTGCATAAAAGCGATATCGCCTAATGAAGGTTGGACGTCGGGTGGATCTACCGTCATAATCATCGGAGAAAATTTCTTCGATGGATTGCAAGTAGTTTTTGGATCAATGCTAGTTTGGAGCGAGtttatCACTCCACACGCGATCAAGGTGCAGGCACCGGCGCGACAAATACCTGGAGTCGTTGACGTTACGTTACATTACAAAAGCAAGCAATTCTGTAAAGGAGCACCTGGTAGATTTGTCTATGtttCGGTAAACGAACCTACGATCGACTACGGCTTCCAAAGGTTACAGAAACTCGTTCCGCGGCACCCCGGTGACCCTGAAAAGCTTCCGAAGGAGATAGTACTGAAGAGGGCGGCGGATCTAGCGGAAGCCATTTATAGTATGCCTAAGAGCGGAAACATGGGGATTGCGGGAGCACCAAGAAGTCCAGGTTCGGTGCATGCACCCGCACCCCCCACATCCAGTTCAGCAACAGCCTTTAATTCGTACACGGGGCAACTTGCAGTGACGGTGCAGGAAAATGGTAGCGCGGCAAAATGGACGGACGACGGTAGTTCCGTGACGACAGGAGCTGCTGCTGACGGTggaggcggcggcggcggcggcggtggcggcagcGGTGGTAGCGTCGGAACCAACGTCGGCGGTAGCGCCGATGCCTATAGACAAAGCAGCAGCGCAAGTCCACGTGGTGTCGTAACCGGTGGTGGTTATTGCGGTAGTTCAGCCAGCACACCACACAGTCACAGTACTAACGGAAGTTATTCTGTCGCCAATCCGTATACCGGCAGTCCAACTCTCTACACCTCACGACTAGGAGAGGTGGTTGGATCACCATTCAATATGAACCCATTTATGTTGCCCACCTGCAATCAAGGATACTCAGCCGCTGCCAGTCCGCTGCTTTCGTCAAATGGCAAATAG
- Protein Sequence
- MRQILKEEPVPRAWPQPALADNGTVGVGRAHFEKQPPSNLRKSNFFHFVIALYDRHGQPIEIERTSFMGFVEKDQESEGQKTNNGIQYSLHLLYSNGVRQVQDIYVRLIDSATKQAIMYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVGVEGPLLAVSDNMFVHNNSKHGRRAKRLDPSDPSEYNSLYPPIPLQTPCIKAISPNEGWTSGGSTVIIIGENFFDGLQVVFGSMLVWSEFITPHAIKVQAPARQIPGVVDVTLHYKSKQFCKGAPGRFVYVSVNEPTIDYGFQRLQKLVPRHPGDPEKLPKEIVLKRAADLAEAIYSMPKSGNMGIAGAPRSPGSVHAPAPPTSSSATAFNSYTGQLAVTVQENGSAAKWTDDGSSVTTGAAADGGGGGGGGGGGSGGSVGTNVGGSADAYRQSSSASPRGVVTGGGYCGSSASTPHSHSTNGSYSVANPYTGSPTLYTSRLGEVVGSPFNMNPFMLPTCNQGYSAAASPLLSSNGK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00879410;
- 90% Identity
- iTF_00142224;
- 80% Identity
- -