Tsep009592.1
Basic Information
- Insect
- Trachymyrmex septentrionalis
- Gene Symbol
- XBP1
- Assembly
- GCA_001594115.1
- Location
- NW:1744434-1749105[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.7e-11 8.4e-09 34.6 16.5 2 60 86 144 86 146 0.95 2 3 0.00021 0.11 11.8 2.7 32 63 137 168 135 170 0.82 3 3 7.9 3.9e+03 -2.8 0.1 33 48 240 255 239 256 0.82
Sequence Information
- Coding Sequence
- ATGAGCTCCGTGAAGAGTGTCATCATCACCCTGCCTAAGAGAGTGTCCAAGGCGATCCCGAGGACCGAATCATCGCGCAACTCGCTACCTAAGCTGAACTTTATGTCAGTCCTGGTGGACAAGGCAAGGATGGACAGCAGGAAGGTCGTCTCTGATCAGCAAAAGGAGACGCGTGATGACGACGTCGCGACGCTCCTCGAACCCGTGGACACCCGCGTACGTGGAAAGAAACGCCGGCTGGATCATCTAACGTGGGAGGAGAAGTTGCAACGAAAAAAACTGAAGAATCGAGTGGCCGCTCAAACCTCGCGAGATCGCAAAAAAGCCAGATTGGACGAGCTTGAGGAAACAGTGAGGACACAGAAGGAAAGGAGTGAGTTACTTACACAGGAATGTGCGATGCTGAGGTCGCAGAACGAACTGCTGACGTCGCAAAAGGAATGGCTGTTGAACGAAAATAAGAGGCTAAGAAACGAAAGAGACGCAGTGAGGAACACGCTCACAGATCAGCAACAACCGATCTGCTCCGCCTGTCGGACCCGTGTCGACAGTGCTGTACCTTCGCTGGGATCTGCAGTATCCCCCAATGACCCTCTGCCGCAGGGTGGGACAGCACAGTCGGCATTGCGCGACACGGACGCCAGAAGCAACCGCACTGCTGAAATTTCTGACTCTATACTTCCTTTGGAAGAATTGTTTAACGTATTCCAAAGCGCCGACGTCGAACGATTCGAAGAGCTGGCGGAGAGCCTCTTACGAGAAGTCAGTCCAGAGGTTGAAGCAAATCCTCCTAGATCAAATGAACAAGTGTCCGTCAACGAAACTCCCGTTGAAAAACCTGACCATCCAGAGGCATTGGTGGGGCAGACATCAAAAAATGTGGAAGCCAGTAGAACTGGTGGAAGCATAGACAGCGTATCCTCTTATCTACGAGATACGTCTAATTGGTTTCTCGAGGACTGCGACACAACGAAGATCACGTCTATCAAGACCGAGACTGAAATTAAACAGGAGTCTGAGACGGCATCGGATCTCGATACTGTCTATGGTACATACGACGAGACCACCAATTCCATCACGATTATGTATCCAGGTGAGGAGAACGACGGCTGCGTGGGTATCCAAGAATGCGTGCAAGAGGTGGTCAGTAGTAACGAGAGCGGTGCCGTCAGCCATGCCGCAGACGACGCTGTAAATCTCACTGTTCCTTCATTGGGCATTCAATTGCGCTATTCGACGCAATTCTCACCAGCATACATCAATTCCATGTCACCTGCTATGAGCGACGTGGATAGTTACGGTATTTCTCCGACGAAGCAGCTGGATTGCGCCAGTTTATCGGACGGTGGATACGAATCTCACGATTCCCCGCAGTCACACATGTCGGAATTATTCGATCTCGAAAGTTTCAGCGAGCTGTTTCCCGCGTTGCTGGCAATTCCGGATAAGGCGTGCTGCCGAGGCGAGCGCCAGATCGATGTCGAATCGTTACATATGTGA
- Protein Sequence
- MSSVKSVIITLPKRVSKAIPRTESSRNSLPKLNFMSVLVDKARMDSRKVVSDQQKETRDDDVATLLEPVDTRVRGKKRRLDHLTWEEKLQRKKLKNRVAAQTSRDRKKARLDELEETVRTQKERSELLTQECAMLRSQNELLTSQKEWLLNENKRLRNERDAVRNTLTDQQQPICSACRTRVDSAVPSLGSAVSPNDPLPQGGTAQSALRDTDARSNRTAEISDSILPLEELFNVFQSADVERFEELAESLLREVSPEVEANPPRSNEQVSVNETPVEKPDHPEALVGQTSKNVEASRTGGSIDSVSSYLRDTSNWFLEDCDTTKITSIKTETEIKQESETASDLDTVYGTYDETTNSITIMYPGEENDGCVGIQECVQEVVSSNESGAVSHAADDAVNLTVPSLGIQLRYSTQFSPAYINSMSPAMSDVDSYGISPTKQLDCASLSDGGYESHDSPQSHMSELFDLESFSELFPALLAIPDKACCRGERQIDVESLHM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00385034;
- 90% Identity
- -
- 80% Identity
- -