Tsep001527.1
Basic Information
- Insect
- Trachymyrmex septentrionalis
- Gene Symbol
- ATFC
- Assembly
- GCA_001594115.1
- Location
- NW:5345823-5357450[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.7 2.9e+03 -2.4 0.3 38 49 126 137 116 149 0.51 2 2 1e-13 5.1e-11 41.7 14.0 2 60 296 354 295 358 0.96
Sequence Information
- Coding Sequence
- ATGTCATCCAGTCAGGACCAGGAGATGTGGCTATGGAAGTACGAGCCGGTGTCCCGCAGTGGGACACCGTCATTAGAAATTGATAATGATTGGCCTTTATTTGATGATCATTCTGTAGAAATTCCTAACGATACTGCGGAAGCTGTTATGTATGAAGACCATCCTTCCCGTGCACAAGTGGCAAAACagcttttagaaaaattagacGAATGGATTAAAGaagAACCCTTCTCAGATTGGCTGGAGGAAAAGGAGCTGCCtatatttgaacaaatatCTCTTCCCGAAAACCAAAACAAACCACCGCTGCCGGTTTACTCCACCGTCATTTATCCGCTAACAGTGACGAAGACAttgcagcagcaacagcaacaacatGATAACACACAAACCCTCTTGCAGGAATTTGAAACGGTTTTGGGTGACGTCGAGGCTTGTCATCAGATCATTCCGCCAACCAGTTCGACGCTTACTCCTCCGCAATCACCCTCACATAAATCGGTCAATGTGGACACGCAACTGCTGGTTACCCTGCAGCCTATGGAATCGTTTGTTAACGATCAACCGATATATAACATAGCTCCAACAGAACAACCGCTGTATGTGGGCAATATATCACGTCAGTGGAATACCCACAACATAGACCCACTAAGTCCGCTTGGCGGGGATGTTGCGAACGAATTAGCGGTGGTGGATGAATACGTTCGCTCACACACCAAGGATATACCGTCTCCCGTAAGTCCTTGCAGCTCCAATAGCAGTTCGGCCGACGATTCCATTGATGATCCCGATTGGAGTCTCGAAACCGAGAAAAGAACAAGCCTGAAACAAACAGTTCATGACTCTTCGAAGCATCGCCATAAGCCGTATTCTCGATCGTCTCTTGAAGACAAGAAGGTACGGAAAAAAGAACAGAATAAGAACGCTGCCACACGTTATagacaaaaaaagaaacaagagaTCAAAGAGATACAGGGCGAAGAGCGCGAACTGGCGGAGCACAATGAgaagttaaaagaaaagatgaagaaCTTACAGCAGGAGATAAAATATCTGAAGGGATTTATGAGGGATGTGTTCAAAGCTAAGGGTATCCTTAAATAA
- Protein Sequence
- MSSSQDQEMWLWKYEPVSRSGTPSLEIDNDWPLFDDHSVEIPNDTAEAVMYEDHPSRAQVAKQLLEKLDEWIKEEPFSDWLEEKELPIFEQISLPENQNKPPLPVYSTVIYPLTVTKTLQQQQQQHDNTQTLLQEFETVLGDVEACHQIIPPTSSTLTPPQSPSHKSVNVDTQLLVTLQPMESFVNDQPIYNIAPTEQPLYVGNISRQWNTHNIDPLSPLGGDVANELAVVDEYVRSHTKDIPSPVSPCSSNSSSADDSIDDPDWSLETEKRTSLKQTVHDSSKHRHKPYSRSSLEDKKVRKKEQNKNAATRYRQKKKQEIKEIQGEERELAEHNEKLKEKMKNLQQEIKYLKGFMRDVFKAKGILK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01475949;
- 90% Identity
- iTF_01261632;
- 80% Identity
- -