Basic Information

Insect: Trachymyrmex cornetzi
Gene Symbol: -
Assembly: GCA_001594075.1
Location: NW:2797760-2809934[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.43 3e+02 1.0 0.1 5 24 22 39 20 52 0.87

2 18 0.031 21 4.6 7.4 4 44 131 174 129 174 0.86

3 18 0.6 4.2e+02 0.5 0.1 2 13 190 201 189 210 0.81

4 18 0.041 29 4.2 2.9 5 43 287 330 281 331 0.82

5 18 0.0001 0.071 12.6 1.1 2 43 347 385 346 386 0.79

6 18 0.026 18 4.9 0.1 5 24 403 421 401 434 0.77

7 18 0.018 13 5.4 2.9 11 43 512 550 508 551 0.87

8 18 0.0073 5.2 6.6 1.1 4 22 569 585 566 590 0.93

9 18 0.0033 2.3 7.7 0.6 5 38 622 655 618 667 0.71

10 18 0.00079 0.55 9.7 6.9 3 43 681 726 679 727 0.92

11 18 4.7e-05 0.033 13.6 0.6 2 44 743 782 742 782 0.85

12 18 0.001 0.7 9.4 0.1 5 38 800 832 798 832 0.77

13 18 0.0069 4.9 6.7 7.7 3 44 906 950 904 950 0.84

14 18 4.7e-08 3.3e-05 23.2 0.3 3 44 967 1005 965 1005 0.90

15 18 0.68 4.7e+02 0.3 3.1 2 39 1019 1056 1018 1066 0.85

16 18 0.00073 0.51 9.8 0.3 14 43 1161 1199 1151 1200 0.89

17 18 1.2e-05 0.0086 15.5 0.1 2 40 1216 1251 1215 1253 0.81

18 18 0.024 17 5.0 0.2 6 41 1273 1307 1270 1315 0.85

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.43	3e+02	1.0	0.1	5	24	22	39	20	52	0.87
2	18	0.031	21	4.6	7.4	4	44	131	174	129	174	0.86
3	18	0.6	4.2e+02	0.5	0.1	2	13	190	201	189	210	0.81
4	18	0.041	29	4.2	2.9	5	43	287	330	281	331	0.82
5	18	0.0001	0.071	12.6	1.1	2	43	347	385	346	386	0.79
6	18	0.026	18	4.9	0.1	5	24	403	421	401	434	0.77
7	18	0.018	13	5.4	2.9	11	43	512	550	508	551	0.87
8	18	0.0073	5.2	6.6	1.1	4	22	569	585	566	590	0.93
9	18	0.0033	2.3	7.7	0.6	5	38	622	655	618	667	0.71
10	18	0.00079	0.55	9.7	6.9	3	43	681	726	679	727	0.92
11	18	4.7e-05	0.033	13.6	0.6	2	44	743	782	742	782	0.85
12	18	0.001	0.7	9.4	0.1	5	38	800	832	798	832	0.77
13	18	0.0069	4.9	6.7	7.7	3	44	906	950	904	950	0.84
14	18	4.7e-08	3.3e-05	23.2	0.3	3	44	967	1005	965	1005	0.90
15	18	0.68	4.7e+02	0.3	3.1	2	39	1019	1056	1018	1066	0.85
16	18	0.00073	0.51	9.8	0.3	14	43	1161	1199	1151	1200	0.89
17	18	1.2e-05	0.0086	15.5	0.1	2	40	1216	1251	1215	1253	0.81
18	18	0.024	17	5.0	0.2	6	41	1273	1307	1270	1315	0.85

Sequence Information

Coding Sequence: ATGAGACATAGTCAAGAAATAAGAACTATCGTAGAAAAAGAAATAGCGACTAAGTCTCTATCGCAATATTTCGAAATAGATGAAGAATTTAGCGCATTGTGCAAACGTTGCAATGATAAAAAGGACATATTTTACGGAACAGATGCCTTAAAACACATTTGTATAGAAACAAATCAACGTTTAAGGTCTCGACAACAACCTAAAGACAATGATGTGAACAGAATGACACAATCAAGCACACAGCACTCTATAGCCACTGAAAATGCAAATACAAGCTCCCATCATGATGACATAAATATGCAAGCTCCTCGAAATCAAGACCAACAAAGTAACACATCCCTATACTGTGCGGATGCAATGGCAGCTCTAGAAGAATCAGACAATTGGATGTGGAAACATGTTGTTAAATTAAACAGTTTTGCTCTACGGTGCAATACAGATTGTTGTCTTCAaacgtattataataaaaatacaagtaGATTGATAACATCGATGAAGGCACATTTATACCATAAGCACAAAATATGGAATGAACAAGATCACTTAGAATGGGGAAACAACAATGACTTGATATggcaatattttaacaaaatagaCTTATACAaaggaaaatATGCTTTAATACATCACATTTGTTTGAAAAAGAATCAACGTTTAAAGTCTCGACAAAAatctaaagataaaaatgtGAATATAATGACACAACAGTCTATAGTCACTGAAAATGCAAATACAAACTCCCATCATGATGATATCAATAGGCAAGCTCCTCGAAATCAGGACCTCCAACAAAGtGACATATCGCTATACTATACGGATATAATGGCAGCTCTACAAGGATCGAACTATTGGGTGCGGAAACATGTTCTCAAATTAGACAATTTTGCTGTACAGTGCAATATAAATGGTTGTAACGaaatttttataactaataGTAAACATGCAAGTAGAATGATAACAACGATAAAGGGACATTTATACCACAAGCACGAAATATGGAATAAAGAAGATCGCTTAAAATGGATAAACGATGATGACTTGATATGGCGATACTTCGACAAAGTAGacttatataaagaaaaatgtaaattttgtaacattttactttaTGAAGCACATATACCATTTATAAAGAACCATCTGCAAAGACATTGTCAAGAAATAAGAACTATTGTACGAAAAGAAATTGCGGATAAGTCTCTAACGCAATATTTTGAAATAGATGAAAAAGAATTTAGCGCATTGTGCAGACTTTGTAATGTTAAAAAGGACATATTTTACGGAACAGATACCTTAATACACAtttgtttagaaaaaaatcaacgttTAAGATCTCGACAAGAACCTGAAAGTAATAACGTGAACAGAATGACACAACAGTCTTTAGCCACTGAAAATGCAAATACAAATTTCCATTATGATATAAACAGGCAAGCTCTTCGAAATCAAGACCAACAAAGTAACACATCACGATGCTGTGCGGATTTTATGGCAGCTCTAGAAGGATCAGACGAATGGGTGCGGGAACATCTTAAATTAGACAATTCCTATGTACGGTGCAGAAGTTGTACTCAAGCTTATAAAATTGGTaaaagaaatcattttattgaAATGATAAGATTGATAAAGGCACATTTATACCATAAGCATGAAATATGGAATGAAGAAGATCGCTTAAAATGGGAAAACGACAATGACTTGAAATGGCGATACTTCGACAAAGTAGGCTTATATgaagtaaaatgtaaattttgtgaCTATTTACTTTGTCCACCATATGTACAACTTATAACGTCGCATCTGCAACGTCATCGTCGGGAAATAAGAGCTGGTGTACGAAGAGAAATTGCGGATAAGTCTGTATCGCATTATTTCGAAATTGATGAGGAAAAATTTAGTGCACGGTGCAAAATTTGCAATGTTGAAAAAGACATATTTTATGGAGCAGATGCCTTAATACATcacatttgttttaaaaacaatcaATATTTAAGACGTCGAAAAGAACTAGCGGCAGCTCGTCAAAGGTCAGACAATTGGGTGTGGAAACATGATCTTAAACTAAACAATTCTACTATACGGTGCAATAtagataaatgtaataaaacttaTCATAATAAATCTAACAAATCAAGTCTGTTGATACAATCGATGAAGGTACATTTATACCATAAGCACGAAATATGGACCGAAAAAGATCGCCTAAAATGGGAAAAAAACAATGATTTGGTATGGCGATATTATGACAAAGTAGACTTATACAaaggaaaatgtaaattttgtatgGCTTTTCATCGTGAAGCAGATCTAGCATATCTAAGGTGGCATTTGCGACAAAAGCATAGTCAAGAAATAAGAgctgttataaaaaaagaaattgcatATAAGTCGCTATCGcaatatttcgaaattcaaGAGGAAGAATTTAGTGCACGGTGCAAACATTGCAATGttgaaatgaatatattttacgGATCAGATGTCTTAGTACGTcacaattgttttaattatcaaCCTTTAAGATCTCGACAAGAACCTGAACATAATAATGTGAACACAGTGATACAACAATCTCTAGCCGATCAAAATACTAATACAAGTTCACATcatgataatataaatagacAAGCTCCTGAAAATCGAGAAAATCAACaaagtaACACATCACGAAATTGTGCGGATGCAACAGCAGCTCTAGATGAATCAGATAAATGGGTGTGGAAACATGTTGTTAAATTAAACAGTTTTACTATACAGTGCAATATAGATTGTTGTGATCAaacttattgtaataaaaatacaggTAGATTGATAAAATTGATGAAAGTACATTTATACCATAAGCACAAAATATGGACTGAAGAAGATCGCTTGAAATGGGAAAGCAACAATGACTTTATATGGcaatattttgataaagtagaattatacaaaggaaaatgtaaattttgtaaaaaaattcgtCGCGAAGCATATTTACCAAATCTAAAGGGGCATCTGCGAAAAAAGCATAGTCAAGAAATAAGTGTTGCTGCACAAAAAGAAATTGCAACTAAGTTACTATCGCATTGTTTTAAAATCGATGAGAAAAAACTTAGTGCATGGTGCAAACGTTGCTATTTTGAAAAGGACATACTTTACGGAACAGATGCCTTAATACATCACATTTGTTTCAAAAAGAATCAACGTTTAAGGTCTCGACAAATATCTGAAGATAAAAATGTGAACATAATGACACAACAGTCTATAGTCACTGACAATGCGAGTACAAATTCCCATCATGATGATATAAATAGGCATGCTCCTCAAAATCAAGTCCTTCAACAAAGTAACACATCACGATACCGTGCGGAATTAATAGCAGCTCTAGAAGGAGCAGACGATTTTGTGTGGGAACATCTTAAATTAGACAATtccccagtcagaaatgataatagaaTCGACGCCGATTCGATGCcgatttcattattatttctgaCTGGTTCTAATGTACGGTGCAGATATTGTATTCAAACTTAtgaaattggaaaaagaaataaatttattaaatttattgaaatgttaACAATGATAAAGGCACATTTATATCATAAGCATGAAATATGGGATGAAGAAGATCGGTTAAAATGGGAAACCGACAATGACTTGATATGGCGATACTTCGACAAAGTAGACTTATATGaagcaaaatgtaaattttgtggCAGTTTACTTCATCAACCATATGTATCACTTATAAAGTCGCATCTGCAAAGTCATCGTGAAGAAATAAGAGCTGATGTACGAAAAAAAATTGCGGATAAGTCTCTATCgcaatatttcgaaatttattaCGATGAATTTTACGCACGGTGCAAACGTTGCAATGTTGAAAAAGACATATTTAACGGAACAGATGCCTTAGCACGTCACATTTGTTCGAAAAAGTATCAACGTTTAAGGTCTCAACAAAAATCTGAAGATAATAATGTGAATAGAATGACACAACAGTCTACAGGCACTGAAAATGCAAATACAAGCTCCCATCATGATGATATAAATAGGCAAACTCCTCGAAATCAAGACCATCAAAGCAATTACGctattagattattatatagCAACACAGGAATAAATGACTTAAGATCTCACTATCAACATCACATGAATGAAAATTCAAGATGTGAAAGAGGAGCTGCATATAATAGCGATTATAGAATAATGCAACAAGACGTAGCTGCAGAAAATATGACTACACGTTATCATCATGAAAGTATATATTGGCATGATCTGGAAAGTCTAAATCGACTAAGGTAA
Protein Sequence: MRHSQEIRTIVEKEIATKSLSQYFEIDEEFSALCKRCNDKKDIFYGTDALKHICIETNQRLRSRQQPKDNDVNRMTQSSTQHSIATENANTSSHHDDINMQAPRNQDQQSNTSLYCADAMAALEESDNWMWKHVVKLNSFALRCNTDCCLQTYYNKNTSRLITSMKAHLYHKHKIWNEQDHLEWGNNNDLIWQYFNKIDLYKGKYALIHHICLKKNQRLKSRQKSKDKNVNIMTQQSIVTENANTNSHHDDINRQAPRNQDLQQSDISLYYTDIMAALQGSNYWVRKHVLKLDNFAVQCNINGCNEIFITNSKHASRMITTIKGHLYHKHEIWNKEDRLKWINDDDLIWRYFDKVDLYKEKCKFCNILLYEAHIPFIKNHLQRHCQEIRTIVRKEIADKSLTQYFEIDEKEFSALCRLCNVKKDIFYGTDTLIHICLEKNQRLRSRQEPESNNVNRMTQQSLATENANTNFHYDINRQALRNQDQQSNTSRCCADFMAALEGSDEWVREHLKLDNSYVRCRSCTQAYKIGKRNHFIEMIRLIKAHLYHKHEIWNEEDRLKWENDNDLKWRYFDKVGLYEVKCKFCDYLLCPPYVQLITSHLQRHRREIRAGVRREIADKSVSHYFEIDEEKFSARCKICNVEKDIFYGADALIHHICFKNNQYLRRRKELAAARQRSDNWVWKHDLKLNNSTIRCNIDKCNKTYHNKSNKSSLLIQSMKVHLYHKHEIWTEKDRLKWEKNNDLVWRYYDKVDLYKGKCKFCMAFHREADLAYLRWHLRQKHSQEIRAVIKKEIAYKSLSQYFEIQEEEFSARCKHCNVEMNIFYGSDVLVRHNCFNYQPLRSRQEPEHNNVNTVIQQSLADQNTNTSSHHDNINRQAPENRENQQSNTSRNCADATAALDESDKWVWKHVVKLNSFTIQCNIDCCDQTYCNKNTGRLIKLMKVHLYHKHKIWTEEDRLKWESNNDFIWQYFDKVELYKGKCKFCKKIRREAYLPNLKGHLRKKHSQEISVAAQKEIATKLLSHCFKIDEKKLSAWCKRCYFEKDILYGTDALIHHICFKKNQRLRSRQISEDKNVNIMTQQSIVTDNASTNSHHDDINRHAPQNQVLQQSNTSRYRAELIAALEGADDFVWEHLKLDNSPVRNDNRIDADSMPISLLFLTGSNVRCRYCIQTYEIGKRNKFIKFIEMLTMIKAHLYHKHEIWDEEDRLKWETDNDLIWRYFDKVDLYEAKCKFCGSLLHQPYVSLIKSHLQSHREEIRADVRKKIADKSLSQYFEIYYDEFYARCKRCNVEKDIFNGTDALARHICSKKYQRLRSQQKSEDNNVNRMTQQSTGTENANTSSHHDDINRQTPRNQDHQSNYAIRLLYSNTGINDLRSHYQHHMNENSRCERGAAYNSDYRIMQQDVAAENMTTRYHHESIYWHDLESLNRLR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -