Basic Information

Insect: Trachymyrmex cornetzi
Gene Symbol: -
Assembly: GCA_001594075.1
Location: NW:1783551-1795244[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.084 59 3.2 0.8 3 43 11 57 9 58 0.72

2 13 9.6e-09 6.7e-06 25.5 0.4 1 44 73 113 73 113 0.94

3 13 0.00013 0.092 12.2 2.0 3 39 129 164 127 173 0.92

4 13 0.079 56 3.3 4.2 3 43 238 282 236 283 0.94

5 13 4.2e-06 0.0029 17.0 2.1 2 44 299 338 298 338 0.95

6 13 0.0075 5.2 6.6 1.8 3 39 354 389 352 396 0.85

7 13 2.6e-05 0.018 14.4 1.5 3 43 462 506 459 507 0.93

8 13 0.00015 0.11 12.0 4.2 2 44 523 562 522 562 0.91

9 13 0.013 9.4 5.8 0.5 5 39 580 613 578 622 0.88

10 13 0.00091 0.64 9.5 5.5 3 44 676 722 674 722 0.84

11 13 1.5e-08 1.1e-05 24.8 2.0 2 44 738 777 737 777 0.95

12 13 0.00029 0.21 11.1 1.8 5 43 795 835 793 836 0.90

13 13 2.5 1.7e+03 -1.5 0.0 27 38 884 894 881 896 0.80

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.084	59	3.2	0.8	3	43	11	57	9	58	0.72
2	13	9.6e-09	6.7e-06	25.5	0.4	1	44	73	113	73	113	0.94
3	13	0.00013	0.092	12.2	2.0	3	39	129	164	127	173	0.92
4	13	0.079	56	3.3	4.2	3	43	238	282	236	283	0.94
5	13	4.2e-06	0.0029	17.0	2.1	2	44	299	338	298	338	0.95
6	13	0.0075	5.2	6.6	1.8	3	39	354	389	352	396	0.85
7	13	2.6e-05	0.018	14.4	1.5	3	43	462	506	459	507	0.93
8	13	0.00015	0.11	12.0	4.2	2	44	523	562	522	562	0.91
9	13	0.013	9.4	5.8	0.5	5	39	580	613	578	622	0.88
10	13	0.00091	0.64	9.5	5.5	3	44	676	722	674	722	0.84
11	13	1.5e-08	1.1e-05	24.8	2.0	2	44	738	777	737	777	0.95
12	13	0.00029	0.21	11.1	1.8	5	43	795	835	793	836	0.90
13	13	2.5	1.7e+03	-1.5	0.0	27	38	884	894	881	896	0.80

Sequence Information

Coding Sequence: ATGGCAGCTCAGAAATCATCAGACAACTGGGTGTGGAACCATGTTCTTGAAGTAGACAATGTTGGTGTACAATGCAATATAGATAGTTGTGATCAAACTTATATTGATAATACAAGTATATCAAAAAGTCAATTCATAACACAGATAAAGGAACATTTATGCCATCAGCACGGAATATGGACTGAAGAAGATCGcaaaaaatggaaaaacgaTAATAGCTTGGTATGGAAATATTTCAACAAAGTAGACTTATACAAAGGAAAATGCAAATTTTGTGATAGTGTAAAAAATGGAGCATATTTACCAAACCTAATGTCACATCTGCGAAAAAAGCATAGTCAAGAAATAAGAGCTGCTGtacaaaaagaaattacaacTAAGTCGCTATGGctttatttcgaaatttgtGAGGAACAATTTAATGCACAGTGTAAACGTTGCAATTGTTCTATGGACATATTTTACGGAACAGATGCCTTAATACATCACATTTGTGCAAAAAAGATTCAACGTTTAGAGTTTCGACAAAAATCTAAAGATAATAAGGTGAACAGAATGACACAACAATCTATAGCCGATAAAAATACAAGTACAAGTTCACATGACGATAGTATAAATAGACAAGTTCTTGGAAATCCAGAAAGTGAACGAAGTAACACATCGCGACACTGTGCGGATGTAATGGCAGCTCAGAAACCATCAGACAACTGGGTGTGGAACCATGTTCTTGAATTAAACAATTTGACATTACAGTGCAAAATATACAGTTGTATTCAAACTTATGCAGTTAAAAGGAACAAGTTAAAAATGACATTTCGAATAAAAGCACATTTATACCATAAGCATGGAATATGGAGTGTAGAAGATCGCTTAAAATGGGAAAACAACAATGACTTGATATGGCGATATTATGACAAAGTAGGCTTGTACAAAGAAAGATGTAACTTTTGTAAGAATGTTTATCATGAGGCATACATACCGTGTCTAAATCTGCATCTGCAAAGATGGCATAGTCAAGAAGTAAGAGATGTTGTACGAAAAGAAATTACAACTAAGTCGCTATGGctttatttcgaaatttgtGAGGAACAATTTAATGCACGGTGCAAGCGTTGCAATTTtaaaatggacatattttacgGAATAGATGTCTTAATAAATCacatttgtttaaaaaagaatCTACATTTAAAGTTTCTACCAAAATCTAAAGATAATGAGGTGAACAGAATGACACAACAATCTATAGCCACTGAAATTGCAAATACAATCTCCCATCATGATGATATAAATTGGCCAGCTCCTCGAAATCAAGACCAACAAAGTGACACATCGCGATACAGTGCGGATGTAATGGCAACACGAGAAATATCAAACAAATGGGTGTTGAAACATATTCGTAAATTGGACAATTTTACTGTACAGTGCAATATAGGTAGATGTGGTAAAATTTATACACTTAAGATAAACAAAAGCGAAACGATATCGAGAATAAAAGCACATTTATACCAAAAGCATGGAAAATTGAATGAAGAAGATCGCTTAAAATGGGAAAACGACAATGACTTGATATGGCAATATTTTGACAGAGTAGATTTATACACaggaaaatgtaaattttgtaaaattcaatataaagaaTAGTATATACCGAGGCTAAAGTATCATCTGCGAAAAAAACATAGTCAAGAAATAAGAGCTGCTGTACAAGAAGATATTGCAAATAAGTCGCTATCGCAATATTTCGAAATTCATGAGGAAGAATTTAATGCATCATGCAGACGGtgcaatgttaaaaataatatattttacggaATAGATGCCTTAATAAATCACATTTGTTTAGATAATAACGTGAACAAAATGATACAACAATCTCTAGCTGaggaaaatacaaatttaagttCCCatcatgataatttaaatagacaaGCTCTTGGACTTCGAAAAAACGAACAAAGAAATACACCGCGATACTGGACGTGGACGGATGTAATGGCAGCTTGGAAAACATCAGACAACTGGATATGGAAACATGTTCTTGAATTAGACAATTTTACTCTACAGTGCAATATggataaatgtaataaaacgtattgttataaatataaaaatataactacatTGGAAAAATCTATAAAGGAACATTTATATCGTAAGCACAAAATATGGACTGAAGAAGATCTCTTAAATTGGAAAAAGAACAACGACTTGATATGGCAATATTATGACAAAGTAGACTTATACAaaggaaaatgtaaattttgtaagaaattttATCATGCAACACAACTATCAAATCAAAAGACACATCTGCAAAGAAAGCATAGACCAGAAATAATAGCTGCTATACGAAAAGAAATTGCAACTAAGTCGCTATCACAACATTTTAAAATCGATGACAAAGAATTTAGTGCAAGGTGCAAACGTTGcaatgataaaataaacatattttacggAGCAGACGCCTTAATACATCACATTTGTTTAAAAAGGAATCAACATTTCAAGTCTCGACCAGAATCTAAAGATAATGAGGTGAACAGAATGACACAATTTATAGCCACCGAAATTGCAAATACAAGCTCCCATCATGATGATATAAATTGGCCAGCTCCTCGAAATCAAGACCAACAAAGCGCATTTTATAGCAGCACAGAAATAAATAACTTAAGATCTCACTGTCAATATCATATAAATGAAGATTCAAGATATGAAAAAGGAGCAGCAGATAATAGCGAGTCTAGAATGATGCACGGAGATGTACCAGCACAACATATAGCTACAAATTATCATCATGAAAGTACATATTGGTACGTTCTTGGAAATCAAGATAGTCAATCTAGTTCTGAAGAAAATAATACGAATAACACAATATTTCTTGCTGATGATGTTTCGGATGCAAGTTCTCGTCATAACGGTACAAACTGGCAAGCTTTTGGATATCAAATGGATCAACAGAGaatgatGCATCAGTCTGTAGCAGCAGAAAATATGGCTACAAGTTATCATGATGGAAGTACATATTCttcagaagaaaataatatgaataacaCAATATTCCTTGCTGATGATGTTTCGGATGTAAGTTCTCATCATGACGGTACAAGCTGGCAAACTTTTGGATATCAAATGGATCAACAGAGaATGATGCATCAGTCCGTAGCAGCAAAAGATATGGCTACAAGTTATCATGATGGAAGTACATATTCGTACGTTCTTGGAAATCAAGATGGTCGGCAAagTTCTGAAGGAATTAACATGGATGACATGGTACAATTCTATGATTACGATGTTTCGGGTCTAAGTTCTCGTCATGACAGTACAAACTGGCAAGCTTTTGGATATCAAGTAGATGAACAAAGaatgATGCATCAGTTCGTAGCAGCAGAAAATATAGCTACCACTCATCATCTTGGAAATACATATTGGCAAGCTCCAGTAAGTCAAGAAGGTCAACAAAAGTAA
Protein Sequence: MAAQKSSDNWVWNHVLEVDNVGVQCNIDSCDQTYIDNTSISKSQFITQIKEHLCHQHGIWTEEDRKKWKNDNSLVWKYFNKVDLYKGKCKFCDSVKNGAYLPNLMSHLRKKHSQEIRAAVQKEITTKSLWLYFEICEEQFNAQCKRCNCSMDIFYGTDALIHHICAKKIQRLEFRQKSKDNKVNRMTQQSIADKNTSTSSHDDSINRQVLGNPESERSNTSRHCADVMAAQKPSDNWVWNHVLELNNLTLQCKIYSCIQTYAVKRNKLKMTFRIKAHLYHKHGIWSVEDRLKWENNNDLIWRYYDKVGLYKERCNFCKNVYHEAYIPCLNLHLQRWHSQEVRDVVRKEITTKSLWLYFEICEEQFNARCKRCNFKMDIFYGIDVLINHICLKKNLHLKFLPKSKDNEVNRMTQQSIATEIANTISHHDDINWPAPRNQDQQSDTSRYSADVMATREISNKWVLKHIRKLDNFTVQCNIGRCGKIYTLKINKSETISRIKAHLYQKHGKLNEEDRLKWENDNDLIWQYFDRVDLYTGKCKFCKIQYKE*YIPRLKYHLRKKHSQEIRAAVQEDIANKSLSQYFEIHEEEFNASCRRCNVKNNIFYGIDALINHICLDNNVNKMIQQSLAEENTNLSSHHDNLNRQALGLRKNEQRNTPRYWTWTDVMAAWKTSDNWIWKHVLELDNFTLQCNMDKCNKTYCYKYKNITTLEKSIKEHLYRKHKIWTEEDLLNWKKNNDLIWQYYDKVDLYKGKCKFCKKFYHATQLSNQKTHLQRKHRPEIIAAIRKEIATKSLSQHFKIDDKEFSARCKRCNDKINIFYGADALIHHICLKRNQHFKSRPESKDNEVNRMTQFIATEIANTSSHHDDINWPAPRNQDQQSAFYSSTEINNLRSHCQYHINEDSRYEKGAADNSESRMMHGDVPAQHIATNYHHESTYWYVLGNQDSQSSSEENNTNNTIFLADDVSDASSRHNGTNWQAFGYQMDQQRMMHQSVAAENMATSYHDGSTYSSEENNMNNTIFLADDVSDVSSHHDGTSWQTFGYQMDQQRMMHQSVAAKDMATSYHDGSTYSYVLGNQDGRQSSEGINMDDMVQFYDYDVSGLSSRHDSTNWQAFGYQVDEQRMMHQFVAAENIATTHHLGNTYWQAPVSQEGQQK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -