Tcor010808.1
Basic Information
- Insect
- Trachymyrmex cornetzi
- Gene Symbol
- Trerf1
- Assembly
- GCA_001594075.1
- Location
- NW:79534-408103[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.4 3.8e+03 -2.4 0.2 29 42 1202 1215 1200 1216 0.88 2 2 3.8e-10 3.2e-07 29.8 0.0 2 46 1368 1412 1367 1412 0.96
Sequence Information
- Coding Sequence
- ATGGCAGCATCGAGTGACAGCGGGCTAGTCGACACAGATCCAGGTCGAGTTAGCAGCATGACAGCCATTAACTCGggTCCGGTCGGAGAGGTGGGCGGCGTGAGGCTGCCACTGCAGTCACTACATGGATACGGATCTGTGTTCATGTACTCGGCGTCGACAAGTCCCGGGGGTGGAGGTGGCCAGAGTAGCGGAGGCGGAGGTGAAGTCACTCTCCGCCTCCGCGAACCCGAGGACATTCCCGAAGAGGTCCTCGCCCGCCTCGAGGACACCGCCACCCTCTCCATCTCTCTTCAAAGCGATGCAGTCCTGAGGCTAGGGGCGGCTGGCGCAGGAAATGGGAACTTGGAGTTGTTTGATAGTGAGAGCGGGCCGGACCTCACGCTATCACCTCAAACCTTCACGTCAACGGCGGAGGCCTTCATCAATGACAATAGCGACAGTCTCGGGGTTCCAGGAGACAACGATACCGGTAGCAGCGAGGAATCGAGGGCCGGTGGCGGTGATCCTGGGAAGCTGGGAGTGAAGAAATCGAGACTGAAGGCCTCCTCGCCGAACAGGCAGGGACCACAGCAGTGTCAGATCTGCGGGAAGGTGTTCAACAATGCATCGGCGCTTACGAAGCACAAACTGACGCATAGCGACGAGAGGAAATATGTGTGCACGATGTGCGGCAAGGCGTTTAAACGGCAGGATCACCTGAATGGACACATGCTGACACATCGAAATAAAAAGCCGTACGAGTGCAAAGCCGAAGGATGCGGCAAGTCTTATTGCGACGCGAGGAGCCTGAGGAGGCACACGGAGAATCATCATGCCGGCAGCAAAATCAACGACATCATCGGTCCTTGCAGCCCCACGACCGGGCCTCATACGCCTAATACCCCCGGAAGCAATCCTAGCACACCAAGCACACCTGGTGCAACCTCCACGACGAATGGTCACGGGCATGCAGCCTTGAAGCAGCTTCTTTCCACCGAACCCGCGCAAACGCAACAGCAAAAGagcGCCACGTCTCCTGGTGCCAGTAACGATGGCCTCACAAAACAACAGCTGGAGCTCATCCAGCAGATCATGCAGCAAACGCAACAGCAGACAACCacgcaacagcagcagcagcagcaacggACCGCGACTCCCTCGGCATCGGTAGCCACACAAATACAAAAGACACAAAAACCGTCCATCAAATCCACCGCGTCGTCCGGCAATATTTCCAACAATTCCGCAAGCGGAAATCCGACCAACAGTGCGAGATCGAGTCCGAAACCGAAGATGTGGAATCACTCTCAACATCACCATGATCATCATCAACACctacagcagcagcagcaacagcaacagcaacacCAGCAACATCCATAccaacagcaacaacaacagccGTACTACGGGCATCACCATCAGTACCAGAGCCAACATCATCAGTACTCGCAGCAGTACTCACCGGATTATCTCTATCGATTTTCCCTTCAGcaacaacagcagcaagcGCAACAGCAGgcgcaacagcaacagcaacaacagcaggTCGGCTCGCCGGGAAGCGGAAATGTAGGGAAGGGCAGTCCATCTTCCGGTAATTCGTCTTCCCCCGGAACGGTCACTACTTCCAACAAGACCCAAACGGAACCGAAACCGGTGGAGTGCAATCTGTGCCatcgaaaatttaaaaacataccCGCCCTTAATGGCCATATGCGACTCCACGGCGGTTACTTCAAAAAGGACGCGGAGAACAAGAAGAGCGAGAAGAAAGAGGTCGTTGGGCCACCTCTGCAAACGGCGTCCGTCAGCGTGAGAGCGCTCATCGAGGAGAAGATCATACAGAAGAGAACGACAGCAGTGGACGCGAATGGCAATCAACAACCTCGTACGAATACTACCGCTTTCACCACGCAAGCCGATGCCGTTTCGCAAACCGTCGTCAAGACGAATTTTGCGGTTCCGGCTCCGCCGCCTTTGGCGGCGGGGGAAAAGGTGCGTCGGTTTTCCGATGGTGAACACTTCCGGCAGCCCAATGTCACCGTGGGCCACACAACTGTACAGAAACACTTGCAGGAAACATCAAAAACTCAAGCTCAAGCACAAGCGCTTGCCGACATGATCCTGAAGGGTACGAAGGTGGCTGTGAAGAGAACAATCTCTGATCCAGGACAAAGATTACACTTAACTTATCAGCAACCTGTACAATCAGCGACGACCAACCAACAACCGAATAATCAGCAGCCACAAGCACAACCTGCGGTAACGGAAAGCTTTACGATGACAGGATACGCCGAGGACGGTGGTTACTTCAGCCCAAGTCTGCAGGACGAAGTATTTCAACAGGTTACAACGGTTCCTGATAGCGTGCTCCTACACGCTACCCACTTGGATTCGATTCAGTTTCAGACGGCCAATCTGTTGCAAGAACAATCTGCCGAACAGCTGCAAGATATCACACTGGAAGACAGATACTCCTCGCAGCACACAGTCAATCCAGATCTTCAAGCGTTGGTGAACTCGCCGTTACCTGATTCTCTGGCCGAATTTAGTACTTACGCCGCGCAATACACGGAAAGTCCTCATACGTTACCAACTCAATCGCCCCTACCGTCGCCTTTAACGCGACACGATAGCCCGAGCTTTACGTATCCGACGCCACCGGCCAGCCAGGAAGGCTTGCTCACCGGAAGCCTGCCGTTGCTAAGTCCTCAGGAAGATCCGGAGAACGTGAGACACGTGTCATCGCCGCTCTCGGCGGCATTTTACACCACCACGATGTCGTCCGCTGCAGCCGTGGAGGAGGCGTTGAACGAAGTGTTACCGGGTGAATCCGATGCAGATGCGGACCTCTACGGGTCCGGTTCGCCAAATCCACACTCGCCACTGCCAAGCCCGTTGTCAGCGACATCGGCGCCGTCGCCGCTGCCACCGTCCTCTGTCTCGTCGCCGGGACCGGTTGCCTTTACGGGCACTAACTTTCCCGTGTCGCCGCATAATGCGCTTCAAAATCAGATGATGCCGAACTCGGAGGATCCTTTACTTTCCTCGACCTCGAAGGACTTTGCCGCCTCCGGTCGTAGACGATTCGAGTTCCAATCGTACAAAGTAATTACGAGCCAAAATTTGATGGACTTCGGTCTTGGAAACGGCAGCGTAGCTGGTATCGTCGTCGACAACAACGGCGACGTCAAACTGATACAGACAGCGGGTCTGCAGAAGGCGAATGTGTACGTGCAAGCGGGTTCTCTCAGTCCTGCGCTGACATTCAAGAAGGAGATCCGCCTAGCGACACCAAAAATCGAACCCGTAACCGTGAATCTCGGCCTGAACGTTCAAACGACAAATCAGCAGCAGTGCAACGTGGGACAGTTTAATCAACAGCAAATTGTTAACCCGGCCAAATTTTTCATTCAAAATAATCACACGACGAAAAACAATATCTTGAGACATAAAACGGTCACCGGAAATTTACCGATACCTATCGATCAGATCAAACAGGAGATGTTAGATGAGGACGTGTTTCTCAGTCCTGGCAGTTTCCCCGCCAGCAGCCCTGTGCGACACTATCGGAAGAGGCCACGCATGGATAGCGGCCAGTACACCAGTAGTTCACATTCTTATCCATCGCGTTTGCGAAAAGCTTGCGACCGCCACTGGGACAGCAGCTACACACCGCCACCGATCCTAGACCCATCTCGTCCCGGTCCGGGGCTGTACGCGAGATTGCATCAACACGAGAGAGACTCGGACTTTAGCTCAGACGATTCTCAAGGAAACGACGGTCCACCGCCAAGAATCAACATCGGCACGAGATATCAAGCCATGATACCTCCGGTGGAGTATGACGGAGACAGGGGAAACGACGGGCCCGAAGCCGATCATCTTCTATGGGATCCCGGCATAAACAATGTACTCACGAACACTGAACTGGAGATGTACCTGCAGTTCGCGTGTTGCGCCGCGGTGCCGGGTGGTGGTAGAAACAAGGAATATGCGCTTCATCTGTTGCATATGTGCAAAGGGAATATTCATGAAGCGATGGTGAAATTGATGCGACCAACGCCTACACTACCAATGGAGCATCCTCTGCTCAGTTACGAGTGCCACGAATCCGATAGATGGACGTCACATGAAATGGACGCGTTCTATCAGGGACTGCTCAAGTACAACAAGGACTTCTCCGCGATTTCGCGGGACGTCGGTGCCAAGACTGCGAAACAATGCGTGCAGTTCTACTACCTTTGGAAGAGGCTCTGTCCTGACGAGTACAAGAGTCTGCGTATTTGTCACGGAAAAGCGAAGATCAAGAACGAAATTAAAGATAGCAAAGATACCAAAGAGCTACGCGACGCCATCGCGTCCGTGTCGGAAATGGACTTTAGTGAAGACAAATCGATCCTTCATCGTACACTGcTACAATCAAGCGGAAGAGAAAATTCGGCGACTCTGACCACTAGCGAAGGAGAGCTGAGGTTATTCGCATACGACTGTACAGatAGCTTTAGCGGAAGTGTAACAGTAACGATGGCCGGAAGCACCCAAACCGCCCAAATCGGCAATACCAGCCACGCCACAGTCAACACCAACTCACAAACTCACACTAGTTCTGAGCAACAACTACCCGTGCCTACCCCACTTCACTACCCCTGCAAGATTTGCGGGAAagttttcaacaaagtaaaaagcagaAGCGCACACATGAAATCCCACAGGCCAATACCCTTACCCGATTCAACGGGTCAGGAATCTAAGCGATCCACGCAACAACCGTCGAAAGCGCAACAGCTGCAGCAGCCAATGCCATCGCAGCAAAGccaacaacagcagcaacagcctGACAATGCTACACCGCAAGCTCAAGATCATCAACAACAACTGCCCGCGAGTATCAGCGACAACAGCGCCAAAAATACAGCACATTTATGTCATAATCCTACGAGGCCCCCATAG
- Protein Sequence
- MAASSDSGLVDTDPGRVSSMTAINSGPVGEVGGVRLPLQSLHGYGSVFMYSASTSPGGGGGQSSGGGGEVTLRLREPEDIPEEVLARLEDTATLSISLQSDAVLRLGAAGAGNGNLELFDSESGPDLTLSPQTFTSTAEAFINDNSDSLGVPGDNDTGSSEESRAGGGDPGKLGVKKSRLKASSPNRQGPQQCQICGKVFNNASALTKHKLTHSDERKYVCTMCGKAFKRQDHLNGHMLTHRNKKPYECKAEGCGKSYCDARSLRRHTENHHAGSKINDIIGPCSPTTGPHTPNTPGSNPSTPSTPGATSTTNGHGHAALKQLLSTEPAQTQQQKSATSPGASNDGLTKQQLELIQQIMQQTQQQTTTQQQQQQQRTATPSASVATQIQKTQKPSIKSTASSGNISNNSASGNPTNSARSSPKPKMWNHSQHHHDHHQHLQQQQQQQQQHQQHPYQQQQQQPYYGHHHQYQSQHHQYSQQYSPDYLYRFSLQQQQQQAQQQAQQQQQQQQVGSPGSGNVGKGSPSSGNSSSPGTVTTSNKTQTEPKPVECNLCHRKFKNIPALNGHMRLHGGYFKKDAENKKSEKKEVVGPPLQTASVSVRALIEEKIIQKRTTAVDANGNQQPRTNTTAFTTQADAVSQTVVKTNFAVPAPPPLAAGEKVRRFSDGEHFRQPNVTVGHTTVQKHLQETSKTQAQAQALADMILKGTKVAVKRTISDPGQRLHLTYQQPVQSATTNQQPNNQQPQAQPAVTESFTMTGYAEDGGYFSPSLQDEVFQQVTTVPDSVLLHATHLDSIQFQTANLLQEQSAEQLQDITLEDRYSSQHTVNPDLQALVNSPLPDSLAEFSTYAAQYTESPHTLPTQSPLPSPLTRHDSPSFTYPTPPASQEGLLTGSLPLLSPQEDPENVRHVSSPLSAAFYTTTMSSAAAVEEALNEVLPGESDADADLYGSGSPNPHSPLPSPLSATSAPSPLPPSSVSSPGPVAFTGTNFPVSPHNALQNQMMPNSEDPLLSSTSKDFAASGRRRFEFQSYKVITSQNLMDFGLGNGSVAGIVVDNNGDVKLIQTAGLQKANVYVQAGSLSPALTFKKEIRLATPKIEPVTVNLGLNVQTTNQQQCNVGQFNQQQIVNPAKFFIQNNHTTKNNILRHKTVTGNLPIPIDQIKQEMLDEDVFLSPGSFPASSPVRHYRKRPRMDSGQYTSSSHSYPSRLRKACDRHWDSSYTPPPILDPSRPGPGLYARLHQHERDSDFSSDDSQGNDGPPPRINIGTRYQAMIPPVEYDGDRGNDGPEADHLLWDPGINNVLTNTELEMYLQFACCAAVPGGGRNKEYALHLLHMCKGNIHEAMVKLMRPTPTLPMEHPLLSYECHESDRWTSHEMDAFYQGLLKYNKDFSAISRDVGAKTAKQCVQFYYLWKRLCPDEYKSLRICHGKAKIKNEIKDSKDTKELRDAIASVSEMDFSEDKSILHRTLLQSSGRENSATLTTSEGELRLFAYDCTDSFSGSVTVTMAGSTQTAQIGNTSHATVNTNSQTHTSSEQQLPVPTPLHYPCKICGKVFNKVKSRSAHMKSHRPIPLPDSTGQESKRSTQQPSKAQQLQQPMPSQQSQQQQQQPDNATPQAQDHQQQLPASISDNSAKNTAHLCHNPTRPP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01122371;
- 90% Identity
- iTF_01355686;
- 80% Identity
- iTF_01476493;