Basic Information

Insect: Trachymyrmex cornetzi
Gene Symbol: ct
Assembly: GCA_001594075.1
Location: NW:1172572-1307584[+]

Transcription Factor Domain

TF Family: CUT
Domain: Homeobox|CUT
PFAM: PF02376
TF Group: Helix-turn-helix
Description: The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 5.8e-28 3.5e-24 84.1 0.0 2 72 540 611 539 616 0.95

2 3 1.4e-32 8.4e-29 98.8 0.0 3 77 949 1024 947 1026 0.96

3 3 5.8e-31 3.5e-27 93.7 0.0 3 75 1180 1253 1178 1257 0.95

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	5.8e-28	3.5e-24	84.1	2	72	540	611	539	616	0.95
2	3	1.4e-32	8.4e-29	98.8	3	77	949	1024	947	1026	0.96
3	3	5.8e-31	3.5e-27	93.7	3	75	1180	1253	1178	1257	0.95

Sequence Information

Coding Sequence: ATGCAGGCCTCCGCGGAGGCCAACTCGCGAAATATAACGACCATGGAATGGCTCTACAAGAAGGAGCCCTTATTCACGCTTGCCCACTTCTGGCAACAGAGAGCGACTTCGGCGGAGAAAGAAATAGCCGCGTTAAAAGAACAGCTCGCCGCAACGAATGACAACAATTCTAAGACTGAGGGACACCAATTGTCTCAGCCTCCGCAGGGAAGCGATCAACAACAGGTACACGATGCCAGCAATCCCAGAAGGACGCCGAACAGCAACTTCGAGCAGGAGCTGCAGGCCAAAGACAAAGAGATTAACCAGTTGGTTGAGGAGGTGTCCAGGCTACAGCAGAGCCTGCAACGCCTTCAGGAGACAAGTGCGCAAGCAACGGCGCGACTTGAGGAGGAACTTGAAGTGCGCAGGCAGCACATCAACAGATTGGAGAGCAAATTGGAACGACAGAGGGATTATGATGATCTGAAGCGCGAAATCAGTGTATTGAGATCAGTCGACCTTTCGCAGATACCAACTGGCGAACCTGGAAAGAGCTTGGAACATCTTCTTATGGAACGTTTCAAGGCGCTCCAACAAGCCGAAAACTTGAAACCCTCCAATACACCTGACGCACTCGGTGGATTATCGTCACCCCTGCAGCGCGCCTCGACCGCCTCGCCCCACGGGGTCGGAGGTGTGCCACCTACGTCCCATGTGTCCTCCCAGCAACCACCACCACCGCCTCCGACAGCAGCTTCCCTCCCTCCACGTTCCACCCCGACGCCCTCTTCGGCCACTTCGACGACTTCGAGCCTCCTCTTCCCGCCACCCCTCCAGAACGTCGAGACCTTCGGCTCGTTTCTCGGTGAAGAAATCGTAGCCAATTGGAGGCGGACATTGGAAAGGTCTATCATGAgccaacagcagcagcagcagcagcagcagcaacaacagcagcagcaacaacaacaacagcagcagcaacaatcACAGCCATCTCAACTAAGCCAATTAACTCAACAGCAACAACAATTACAACAAGTCCAACCGCACATGGGTTTACACCCGCCAACAACGCCAAGTAGTTTAAATCATCTTCCATCGCCGGGTGCGGATCCATCGTCCACTTCAAACACTCCGGTGAAATCGAACACACCGATCGGTACATCCTTGGGCAGTTTAGATGTCACTGAGAAAGCGCCAACGCCAGTATCAGGACATGAAACACCAGCCCCTCCAACACCATCCTCCACAACCGCCTTGACATCGCCGCCGAGCTTCCAGCCACCGACGTCGATGGTGGAAACTAGTACCCCTTCAGCTTCCATCAATGGCAGCGGTCTCACGCCCGGCGTACCAAGTGCACCGCCCCCGAAGAGTCCGCCTGATCAAGAATCAtgtcacaataataataatagccaTCATCTAGCAAATAACAATATCGGCGGATTAAGTGTTCTCGATACGCTGAAGAGTCCGTTTCGGTTTGACGATCGAACGTATCCCTTCCGATTCGGCGACGAGTTCGGTGCCGCCGGTATGGCCGGTCGACTGGGCGAGTCCCTCATTCCAAAGGGAGATCCCATGGAGGCGAGACTGCAGGAAATGTTGCGTCATAATATGGACAAGTACGCCTCACAGAATCTTGACACTCTTCATATAGCCAGGCGGGTGCGCGAACTATTGTCGATACACAATATCGGTCAAAGACTATTCGCCAAATATGTTCTTGGGCTAAGTCAAGGCACGGTCAGCGAGTTACTTAGCAAACCCAAGCCTTGGGACAAGTTAACCGAAAAGGGCCGCGACAGTTATCGGAAGATGCACGGTTGGGCTTGCGACGAGAACGCCGTGATGCTGCTCAAGTCCCTCATCCCCAAGAAAGAGTATGTTTCAGGCAAGGAACAAGGAATGCCAGCATTCGCACGTGGACCACAGGATAGTGGTCCGCAAGAAATGAGTGATGAAAGATTGGCTCATATTCTGTCGGAATCGAGCCATATGCAAATGAGAGGTGAGCACGAAGTATCGAACGATGCTGACAGCAAGAGTCCGAACAGAATCGGTTGCCCGAGTCCGTTCAACAAAGACAGACTGGACAGCCAAAATAGGAGACTGAAGAAGTACGAAAACGACGACATTCCCCAGGAGAAGGTAGTAAGGATTTACCAAGAAGAACTGGCTAAGCTGATGGGCACGAGAGTGGAGAATCTTCGTCCGCGAGAGTTCCCTAGCGCGATCTTTCCACATTTTTTCAGTGGTACGCAGAGCAGTCTTCAAGGCATCGAGCGCACCCAGGAAGACATTCGATTAGCATTGGACGCTTATCACCGTGAGCTCCAAAAATTGAATGCCGCACCAGGTCAGAATCCCTCGATGACTGGACTGCCAGGATTACCTGGATTACCAGGTTTGTTGGCGCTTCAGCAACAAGCTCTTCAACAACATCATCTAGCCGCGAATGGCGGTGGTGGTGTTCAGGACTTGAGTTTAGGCAAAGTGGATCCGcgcaataaaatgataaatggTGTgtcagaagaagaaaaagagaagatgGAAGAGGCGATGAGACACGCTGGAAGTGCATTCTCTTTGGTGAGGCCGAAGCAAGAATCGACAGGTCCTCAATCGACGCCTGGCGGTTCTAGCGCAAGTTCACCGCTTGGCAATTCCATACTTCCCCCTGCGATGACACCCAACGAAGAGTTCTCCAGTGCGGCGGCAGCCAGTCCTCTTCAGAGAATGGCCTCCATCACGAACAGTCTGATAAGTCAACCGTCCACCCCAACTCATCATTCGGCTAATCAAAGACCGCTGAAAGCTGTGCTTCCTCCGATCACGCAGCAGCAGTTCGACCTGTACAATAATCTTAATACGGAAGATATTGTGAAAAGGGTGAAGGAACAGCTGTCTCAGTATTCGATTTCACAACGGCTATTCGGCGAATCAGTATTGGGTCTATCTCAGGGATCAGTGTCAGACCTCCTCGCGCGTCCAAAACCATGGCACATGCTAACCCAAAAAGGTCGAGAGCCCTTTATTCGGATGAAAATGTTCCTCGAAGATGACAACGCGGTACACAAGCTCGTCGCCAGTCAGTACAAGATCGCCCCGGAGAAGCTAATGAGGACCGGCGGCTACGGCGGCCTGCCTCGTAAGTTTAACTCAGCTTGCGGAACGCCTATGAAACCTATGCCACCAACAAAACTCGTCCAAGAACAGCTTCAGAACGCAGCGAAGGCGCAGGCCGCCGCTCAAGCAGCCGCACAAGCAGCGGCGCAACAGCATCAGCAGGAAAATCAGATGCAACTCGGCCCGCCACAGCAAAGTCCTCAACATCCACAACATCCACAGCCACCACCACCGATGATGTTGACCCCACCTGGACCTCATCATCCTCATACTCAGCTCAGCATGCAAGAACTCCAAAAGaaacaacagcagcaacagcaacaaatGTCACTACACTCGCCACATCATCAGATGGCACCGTCGCCTCTTCGAAGTCTTCATCCTCACATTTCACCAAGCGTATACGAGATGGCCGCCCTTACGCAAGATCTCGACACACAGACAATCACAACAAAGATCAAGGAAGCGTTATTAGCTAACAATATTGGTCAGAAGATCTTCGGTGAAGCGGTTCTCGGTCTGTCACAAGGATCTGTCAGCGAGTTACTGAGCAAACCGAAACCGTGGCATATGCTCAGTATAAAAGGTCGAGAGCCTTTCATTAGGATGCAGCTTTGGCTGTCAGATGCACACAACGTTGATCGATTGCAAGCGTTGAAGAATGAACGACGAGAGGCGAACAAGAGACGACGTAGCAGCGGTCCCGGTCACGATAACAGCTCTGATACTTCGAGCAACGACACAGCCGAATTCTATCACGCGGCATCACCTGGTCCGGGACCTACTACCGGGAAGAAGCAGCGCGTTCTTTTCTCGGAAGAACAGAAAGAAGCTCTCAGACTAGCTTTCGCCTTGGATCCTTATCCCAATGTGGCTACCATCGAATTCCTTGCTAGTGAACTGGCCCTGTCGTCGAGAACGATAACAAACTGGTTTCACAATCATCGAATGAGACTGAAGCAACAAACACCGCACGGCCAACCGGAACCGCAGTCGCCGCGAGAACCTGGTCAACCGTTCGATCCTGTTCAATTCAGACTGCTGTTAAACCAAAGACTGCTGGAGATTCAAAAGGAGAGACTGGGTCTAGGAAATGTACCTTTACCTTACTCTCCGTACTTTAATCCCAACCTGGCGGCCCTGGTAGGTAATGCACTGAAAGAACAATGCTCTGGTCTGGACCTCTCGATGAATGCTCTAAAGAGAGAGCCCAATCAAGAATTCGAAGACGAAGATGTCGACGATGCGATGAGTAATCTAGGTAGCGAGGACTCGGAAGGTTCGGCCAGTAGTATAAAGAGAGAACCTACAGAAACACCGACGGCACCCACGACGGTCAGGTCCAATAGAAGAAAACCCGCGGCACCGCAATGGGTGAATCCGGAGTGGCAAGAACCAACGAGAACAGGCGATGAAGTTATCATCAATGGAGTTTGTGTGATGCAGACGGACGATTATGGAGTAAAAAGAGAGGCCGAAGAGACCATAAGAATTGAACCGACACCAGTGCAAGATCGATATGAAGAAGATGCTCAAAGCGATGTCTCTTCCGTGTCTGGCAACAATGGAGCCGATCGGGATAGTCCGCTTCCCAGTCCAAAATCTGGTCAAAACAGTCCAGCGACGTCGCTCAGACCGCCGTCAGCGCAACAGACGCAACAGTCCACGGAGGAAAGTCCGAAGGACGTGGTGAAACACGAACCGGAGGAAACGTGGGATTACTAA
Protein Sequence: MQASAEANSRNITTMEWLYKKEPLFTLAHFWQQRATSAEKEIAALKEQLAATNDNNSKTEGHQLSQPPQGSDQQQVHDASNPRRTPNSNFEQELQAKDKEINQLVEEVSRLQQSLQRLQETSAQATARLEEELEVRRQHINRLESKLERQRDYDDLKREISVLRSVDLSQIPTGEPGKSLEHLLMERFKALQQAENLKPSNTPDALGGLSSPLQRASTASPHGVGGVPPTSHVSSQQPPPPPPTAASLPPRSTPTPSSATSTTSSLLFPPPLQNVETFGSFLGEEIVANWRRTLERSIMSQQQQQQQQQQQQQQQQQQQQQQQSQPSQLSQLTQQQQQLQQVQPHMGLHPPTTPSSLNHLPSPGADPSSTSNTPVKSNTPIGTSLGSLDVTEKAPTPVSGHETPAPPTPSSTTALTSPPSFQPPTSMVETSTPSASINGSGLTPGVPSAPPPKSPPDQESCHNNNNSHHLANNNIGGLSVLDTLKSPFRFDDRTYPFRFGDEFGAAGMAGRLGESLIPKGDPMEARLQEMLRHNMDKYASQNLDTLHIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHGWACDENAVMLLKSLIPKKEYVSGKEQGMPAFARGPQDSGPQEMSDERLAHILSESSHMQMRGEHEVSNDADSKSPNRIGCPSPFNKDRLDSQNRRLKKYENDDIPQEKVVRIYQEELAKLMGTRVENLRPREFPSAIFPHFFSGTQSSLQGIERTQEDIRLALDAYHRELQKLNAAPGQNPSMTGLPGLPGLPGLLALQQQALQQHHLAANGGGGVQDLSLGKVDPRNKMINGVSEEEKEKMEEAMRHAGSAFSLVRPKQESTGPQSTPGGSSASSPLGNSILPPAMTPNEEFSSAAAASPLQRMASITNSLISQPSTPTHHSANQRPLKAVLPPITQQQFDLYNNLNTEDIVKRVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGLPRKFNSACGTPMKPMPPTKLVQEQLQNAAKAQAAAQAAAQAAAQQHQQENQMQLGPPQQSPQHPQHPQPPPPMMLTPPGPHHPHTQLSMQELQKKQQQQQQQMSLHSPHHQMAPSPLRSLHPHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNVDRLQALKNERREANKRRRSSGPGHDNSSDTSSNDTAEFYHAASPGPGPTTGKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLASELALSSRTITNWFHNHRMRLKQQTPHGQPEPQSPREPGQPFDPVQFRLLLNQRLLEIQKERLGLGNVPLPYSPYFNPNLAALVGNALKEQCSGLDLSMNALKREPNQEFEDEDVDDAMSNLGSEDSEGSASSIKREPTETPTAPTTVRSNRRKPAAPQWVNPEWQEPTRTGDEVIINGVCVMQTDDYGVKREAEETIRIEPTPVQDRYEEDAQSDVSSVSGNNGADRDSPLPSPKSGQNSPATSLRPPSAQQTQQSTEESPKDVVKHEPEETWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00729955;
90% Identity: iTF_00221825;
80% Identity: iTF_01476077;