Ttro004025.1
Basic Information
- Insect
- Trachelus troglodyta
- Gene Symbol
- CSRNP3
- Assembly
- GCA_030142635.1
- Location
- JARQTJ010000356.1:1730237-1734167[+]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.52 1e+04 -3.7 0.0 122 162 423 463 421 482 0.69 2 2 1e-100 2e-96 322.3 7.5 2 218 723 932 722 932 0.91
Sequence Information
- Coding Sequence
- ATGGAATCACCTTTGGCCCAGTCTCGTCTCGTGGAGGCCCAAGAGGATTCCACCTCAGTGGAGCCTCGATTGGTCCCAGAAGCCAAGGAACTGGAGGATGGTGCTGCTCCTGCTGTCGAGTCACTTGCTCCTTCTCAAGACTCGACAGACTCAGTAATTGCACTTCCGGATACCGGAGGTTCTGCCGAGAGGACGACTACGTCTTCCTTTCGGGACAACTCGGAGAATCGGTGGAAGCTGATCGAAAACTGCACTGACTCCTCGATCGAGGATGTCGCTAAGGAGACGCTCACATTACTGGTGGAAGCCACCGAGAGGCTGGAAGAGTCTACTAGGTCCATCGGTGCCATGGGAGACGTTGCTGATCATGGGACTCTTCAGGATGAAGAAATACCTGCCTCATCGCAATCCTCCATGAACCCTTCGCTGCTGGGGTCACCGCAACTTCCAGGATCCTCCAGAAAGAGACCGGCTACCGACTTCCTGCCGATAACCGCAGAAATCAAAAGAATGGGAGTAGAGATTTCGGAAGAGCGCGCCAACCAATTGAAAAACGACATTCGTCGATTGTCCCCAGTGGTGGTGAGTCTTCACGAGAGGACGCTGGGAGAGATTTCTTTGACTCCGGACACGAGTCTCTTTGTGGAAGATGCCGAGGCCTTTTTGCATGACGACGATGTCCCCGAGAGTTCAGGATCTGCCGACGGGGACCTTCTTCTGGAAGAATCTCTCTCCCTGTCCAGTGGAATTGCCAGTGGGTCCAATCCGGAGGGTACAACCAGTTCAAGCGAAGCGACGAGCTCTCCCAGGATCGAGAATGTCCCTGAGGACGATACGACAATCTTTTCTTCGGAACTCGAGGCTCTGACTTCTAGGAAAATCATCCCGGAAGATCCTGTCGATGATGTTCCTCTTAGTGACAGACTTTCTCCTGCTTTCGTGGCTGTTAATACGAACTGTGAGAATAGTGATAATTGTGAGGCAGGTGCGAGCGATGATATCGACAGTGGTGCTGCGGTCGATCCTCTCGAGGAAAAACAATGCGTGCACGATGACAATCTAGAATCGCGTCTTATTTCCGGGGGCAGTATAGATAACCTTAAAACTGCGAGTCAATCAAAACTAGATAATACAAGGGACGATCAGTTGGTCAAGTGCGAATCAAATATGCGGGACGTGGTGGTCGTTCTTACGCGAGTCGATGCTTCGCCGAAGAGTCCTGCCAAACTCCCCTCTGAAGGTAGTGGTGCCAGTTCTCTAGGTATAAGGAGTATCCTGCACGACGCTTTAGTCAAGAAGTCTCGGCATTCCGAGGTCGAGTCGCTTGCAAATATACGATACAACCTGAAGTTTTGTAAAGTGGTTATGGAGAAGGTATCTATCAACGAGCAGAGGAAGCCATCCCAGTCGCTACTGGGAAACCTCGTTGACAGGGAGGAAGCTCCGGGTATACCGAAAGGAATAATAGAGAAATTGAATGTTGACGAGGAGATTGTCTTTGCatctggaaaaattgaaaaccaaTCAAATAATCAGATAGAACCGAAGACTTTACCCCTTTCTGTGGAGGAGACTTTGAAAGTGCCTGGGGATCGAGCAGCCGATATTCAGGGATCGAATGACACGGAAACAGAAACTGCTTCCGATAGTTCCGAACTGACTTCCATGGTAACGGTACACCTTAGAACGTGCGTGGAAACCGGCTCCGAGCCTGTAACCTGTCCTGAACCTGATCCTCTTGGCTGCGAGGAAATTTCGCCGGAAATCATAACCAGGTTGGAGCCCGAGAGGCCCGAACCTTTTACCGAAGACTCAGCTGAGAGTCTTGCGCTAGCTACGGGTGCCAGGGACGAAGTGAGATCGGACGGCAGCGACTCAGGATTGGGCAGTGAACTTCCTGGTGATCCTGGACCCGCACCTGCTCCGGAGAGTGATTCCGAAACTTCGTTCCTCGACAGGATACCTGATGATATCCTTACCGACAAAGAAAAAGCTGTTAGTCAATTGGAAGGTTTTGTTCCGGACGTCGTCATCCAGGTTACTCCTCCAAGAGCGATTCCCAATTTTCCGAATCCGCCTAAGAGCAATCTTAAGAGAAGACTCACAGATTGCATGGAGAGTGAACCCAGTCCGGCCAAAAGGAGTAACACAGATGATAGtacacaaaaaaagaaaaatatccacTTCGATGCAGTTACTGTTTACTACTTTCCAAGGGCCCAGGGTTTCACCTGTGTTCCTTCTCAGggtGGTAGCACACTCGGCATGAGTGCAACGCACACGCACGCAGAGCGCTTCAGTCTGTCGGAACATGCGGCCGAGCAGCGACGAATTCACCGCGCGAGACTAGCTCAATTGCGATCAGAACGTGCAGCTAATTGCGTGACCGAAGCAGCTTCCAGTTCGGAAGATCCCAGCGACGACACCGACGAGGAACCTAGCGACACTGAGGAACTCGATATAGATAGTTACTATTTTCTACAACCAGTGCCGACCTGGCAGCGCAGAGCTTTACTCAGGGCAGCTGGAGTTCGCAGAATAGACGCGGTCGAGAAAGACGATTGTCGAGATATACGTGCCAGTAGAGAACATTGCGGATGCGGTTGTAAGGGCTATTGCGACCCCGAGAGTTGTCCTTGCAGTAGGGCTAACGTCAAATGTCAGGTCGATCGAGCTGGTTTCCCTTGCGGTTGCTCTCGGGACGGATGCGCCAATAGTTCAGGACGCATCGAGTTTAATCCCGTTCGCGTCAGAACGCACTTCATTCATACACTCATGAGACTAGAATTGGAAAAGAAGCATCGCGAGGAAGAGAACGAACACGATGCGGATAATCATTCGATGAGAGGTCCTCTACGAGAATTAGGATCTGTCATGAATAATGAATCCTGCATTAATGATAGTGGCAATGGATTCATGACGCTTCACTACGAAAATTCGGATGGTACGAATTCAACTTGTCAACCGGAAGTACCTGGTGCTCGAGAGGACAGTCTTGACTTGTATGCCATAAGGGACGATTGCTATCCCAGTGAGGATACGGTTGACGGCGCGCAAAATCCTCAGAGAAAACTGCATCCTGAATTCAGTCAGACCTTCCAAACCTTTCCAGGACAAGTCAATCCCGTTGTGGCGTTCCAGCAGGGGGGTTATCAGGATTATCAGAACTACCAACCGTTACCCTCGACTTCTCGGGCTCACTACCAACCTCAATTTCAACCTGTGCCCGGAAGCTCAGGATTCTCTCCTTACGCAGCCTACGGTCAAGATACCAGTAGTTCCATCCAGGGTGGCTGCCAGCCTCACGTAGGACCTCATGGTACAGGGTACGAGACCTCCTTTTGCCAGGAGGATGGTGCAGCTTCCCAGTACACGAATTTAAACTCTGTTCAACCTATGAATACAGTGATGCAGCAGATGGGTAAATTGGAACCCTTCTCTGAACTTCTAGCAGGAAGATATTCCTACTACGGTGAAGTGGAGCCACAGAATCACGGGAGTTACCATGGGAACGCGGCGAAGGTCGAACCAGAGAAGAGTCAGACGAGCGAACAGCAGTCAGAGAACGCGGAGGACTGCGACGAGAATTTTGGAGAAATTATCAAGAAGTCAATGGTGGAGACTGTATCCGCTTAA
- Protein Sequence
- MESPLAQSRLVEAQEDSTSVEPRLVPEAKELEDGAAPAVESLAPSQDSTDSVIALPDTGGSAERTTTSSFRDNSENRWKLIENCTDSSIEDVAKETLTLLVEATERLEESTRSIGAMGDVADHGTLQDEEIPASSQSSMNPSLLGSPQLPGSSRKRPATDFLPITAEIKRMGVEISEERANQLKNDIRRLSPVVVSLHERTLGEISLTPDTSLFVEDAEAFLHDDDVPESSGSADGDLLLEESLSLSSGIASGSNPEGTTSSSEATSSPRIENVPEDDTTIFSSELEALTSRKIIPEDPVDDVPLSDRLSPAFVAVNTNCENSDNCEAGASDDIDSGAAVDPLEEKQCVHDDNLESRLISGGSIDNLKTASQSKLDNTRDDQLVKCESNMRDVVVVLTRVDASPKSPAKLPSEGSGASSLGIRSILHDALVKKSRHSEVESLANIRYNLKFCKVVMEKVSINEQRKPSQSLLGNLVDREEAPGIPKGIIEKLNVDEEIVFASGKIENQSNNQIEPKTLPLSVEETLKVPGDRAADIQGSNDTETETASDSSELTSMVTVHLRTCVETGSEPVTCPEPDPLGCEEISPEIITRLEPERPEPFTEDSAESLALATGARDEVRSDGSDSGLGSELPGDPGPAPAPESDSETSFLDRIPDDILTDKEKAVSQLEGFVPDVVIQVTPPRAIPNFPNPPKSNLKRRLTDCMESEPSPAKRSNTDDSTQKKKNIHFDAVTVYYFPRAQGFTCVPSQGGSTLGMSATHTHAERFSLSEHAAEQRRIHRARLAQLRSERAANCVTEAASSSEDPSDDTDEEPSDTEELDIDSYYFLQPVPTWQRRALLRAAGVRRIDAVEKDDCRDIRASREHCGCGCKGYCDPESCPCSRANVKCQVDRAGFPCGCSRDGCANSSGRIEFNPVRVRTHFIHTLMRLELEKKHREEENEHDADNHSMRGPLRELGSVMNNESCINDSGNGFMTLHYENSDGTNSTCQPEVPGAREDSLDLYAIRDDCYPSEDTVDGAQNPQRKLHPEFSQTFQTFPGQVNPVVAFQQGGYQDYQNYQPLPSTSRAHYQPQFQPVPGSSGFSPYAAYGQDTSSSIQGGCQPHVGPHGTGYETSFCQEDGAASQYTNLNSVQPMNTVMQQMGKLEPFSELLAGRYSYYGEVEPQNHGSYHGNAAKVEPEKSQTSEQQSENAEDCDENFGEIIKKSMVETVSA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01473172; iTF_00253559; iTF_01473918; iTF_01198658; iTF_01199398; iTF_00770365; iTF_00292264; iTF_00296772; iTF_00294471; iTF_00296007; iTF_00291528; iTF_00295240; iTF_00293713; iTF_00298303; iTF_00297544; iTF_00252809; iTF_00255073; iTF_00292940; iTF_01395117; iTF_01130807; iTF_01474680; iTF_00252062; iTF_00254317;
- 90% Identity
- iTF_00292264;
- 80% Identity
- -