Ttro001620.1
Basic Information
- Insect
- Trachelus troglodyta
- Gene Symbol
- DNAJC1
- Assembly
- GCA_030142635.1
- Location
- JARQTJ010000102.1:218421-220562[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-08 1e-05 25.7 0.0 2 38 299 338 298 345 0.88 2 2 3.2e-09 2.8e-06 27.5 0.2 3 45 381 428 380 429 0.88
Sequence Information
- Coding Sequence
- ATGGACAAAATGCGGCTGGTGTTCTTTACAATATTTGTCATATGCCATTTCCTGGGCACGACTCTTGCTTGGGATAACGATGAGCTCGAAGTTTTCGACGTCGTTGAAGAGGTTAATCAGAATTTCTACGAATTGTTGGGCGTCCCTCAGgctGCAAATGCATCTGATATTAAGAAAGCCTTCAGACGCCTTTCTCTACAGCTACATCCCGATAAGAATTCAGCTGCAGATGCAGAGGTACAATTCCGAAattTGGTTGCAGTTTACGACATTCTAAAGGATCCAGGAAAGCGTGAACGGTACGACAATGTTTTAGTGAATGGTTTACCTAATTGGCGTTCAGCTGTATACTATTATCGCCATGTCCGTAAAATGGGATTGCTCGAAATGAGCATCAttctatttattgtaataacaATTGGACAGTATATTGTATCATGGGCGGCTTACTTCGAAAAAAGATATACTTACGAGCAGGTCTTAGGTAGTAAGCTGCAGAGAATGcagaaaaagaatagaaaggGCAAAATGGACGTTCCAGATCTGGCTGAGATCTTAGAGAGGATACCGACGCCGAGTGTGTCGGATACGCTGCCTTTCCAGCTGCCAAGATGGACATTCTCCGCGATTGTCGGTGTACCTTCAGCCATCCGTGCCATTAGTGAAATGCTCGAAGAGCGTAAAAGACAGAAAAAGCTTCTAGAGGAAGAAGCAGCACGCGCACAAGAGAATACAGAACCGGAAGTGGAGCCACCAGTATCCCGTGGACCTAGAAGACGAAGAGGTGCAGGCTTCACTCCACAGGAACGTAGCGGTACTGGAGACGTCAGTAGTAAACGTGAACAAGTTCCATTGGTAAATGACGTGGTTCCACAAAAACCACGTATCAGTGGAGGTCTCTGGACAGATGATGACATAgctgaattaataaaacttgttaaaaaatatcccgGTGGTACTTCAGATCGTTGGGAGAAAATTGCAGACGCGATGAATCGAACGGTTGCAGAAGTGACGCACATGGCTAAGAAGgTAAAAGATGAGGGTTTGAAACCCGGTCAGTCTACCGAAACGGAAGTAGTACTTGAAGAACAACCAAAGAAAGTCAAAACTCGGGCTGAAGTTGTAGACACAGTCTCAGATTGGAGTCAAGAACAACAGCGTGCTTTGGAAGCCGCCTTAACAAAAAATCCTAAGGGAATGTCTTTAGATAGATGGGAAAAAATAGCTAGTTGCGTGgaaggaaaaacgaaagaaGAATGCCAAGCTCGATATCGTCAGCTAGTGGAACTTGTCAAGAAGAAACAACAAACCGAATGA
- Protein Sequence
- MDKMRLVFFTIFVICHFLGTTLAWDNDELEVFDVVEEVNQNFYELLGVPQAANASDIKKAFRRLSLQLHPDKNSAADAEVQFRNLVAVYDILKDPGKRERYDNVLVNGLPNWRSAVYYYRHVRKMGLLEMSIILFIVITIGQYIVSWAAYFEKRYTYEQVLGSKLQRMQKKNRKGKMDVPDLAEILERIPTPSVSDTLPFQLPRWTFSAIVGVPSAIRAISEMLEERKRQKKLLEEEAARAQENTEPEVEPPVSRGPRRRRGAGFTPQERSGTGDVSSKREQVPLVNDVVPQKPRISGGLWTDDDIAELIKLVKKYPGGTSDRWEKIADAMNRTVAEVTHMAKKVKDEGLKPGQSTETEVVLEEQPKKVKTRAEVVDTVSDWSQEQQRALEAALTKNPKGMSLDRWEKIASCVEGKTKEECQARYRQLVELVKKKQQTE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00255011; iTF_00294403; iTF_00295941; iTF_00295175; iTF_00292872; iTF_00291465; iTF_00297481; iTF_00252746; iTF_00254252; iTF_00293649; iTF_00292210; iTF_01473109; iTF_00253494; iTF_01474614; iTF_01130744; iTF_01473848; iTF_00298238; iTF_00252000; iTF_00296704; iTF_01198597; iTF_01199335; iTF_00770302; iTF_01395053;
- 90% Identity
- iTF_01395053;
- 80% Identity
- -