Basic Information

Insect: Trachelus tabidus
Gene Symbol: lov
Assembly: GCA_030142655.1
Location: JARQTI010000602.1:1051648-1054081[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 2.8e-18 4.1e-15 55.6 0.0 1 44 498 541 498 542 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	2.8e-18	4.1e-15	55.6	0.0	1	44	498	541	498	542	0.96

Sequence Information

Coding Sequence: ATGTCGAGCGCCGCGGAGAGTCCTGACGGGATGGCTCTGCAGTCCCATTATTCCCTTAGATGGAACAACCACCAGGCCCATATTCTTCAGGCGTTTGAGGCCCTCCTTCACGCCGAGACCCTCGTCGACGTGACCCTCGTCTGCGCCGAGACCAGCATCAGAGCTCACAAGGTCGTTCTGAGCGCGTGCAGTCCCTTCTTCGAGAGGATATTCGCGGAGCATCCCTGCAAGCATCCGGTGATCGTGTTGAAGGACTTCCCCGGCCGGGAGGTGACGGCACTGATTGACTTCATGTATCGTGGCGAAGTACGAGTAGGACGTGAAGAATTGCCAGGACTGATGCGAGCAGCCGAGAGTCTTCAGGTGCGAGGTTTGGCATCTTCGGAACCGAGGCCAGCGAGTCCACCGGAAACGCCAACGGCAGATCTTCTGCTTGGAGAACCGTCGACGCCGGAAGGCGCACGTCAAGGTACGCCAGAGGACGACGACGCGTCGGAAAGCGCGACAGTGCCACCTCCAGAACCTGGAGGCTTTTCCAGGGAGCATCAACTAGCACGTGACGGGTTACCGCACATGGGCCAACTTAATTTCTCAGTGCGGGAACTGCGGGAGTCCTGCGGTTCACCATTGATGCCTCGAAGAAAGCAAGCGAGACCGCGACGAAGATCCGGGGAGTTGGTACCTCAGGATTTGAGTAGACATCATCCCGCCCCGAGTCCAAGTCCTCCGAGTGGCGGTAgcggcggtggtggcggcggcggcggcggcggacTGAACCTCACGAATCAACAGAGGGACCAGCCCGGCCAACAGGAGGACATGGCGGAGAATCTGTCGATGAAACGGTCGCTCTCTCCCTTACCGACGGAGCACAATATCAAGACGGAGAGCGAGAGTGCCAGCAGTCCTCGAGGATCGCCTCTGACAGGGACGAGTCTACAGCCCGACGGTTCGTTGCAGGAGTTACCAGCAGCAGGGTTCCCAGGAGTCTCGGCCCTCTCCTTAACCCCACCCCATCACCACAGTGAGTACCTGACCAGTCTGGGACAACTGGCAGCTCAGTGGCTCCCCAATCACCCGCAGGGTCAACTGCCTCAAGGTCATCACCCACGGGAAGGGAGTCCGCACAATAGGTCCCATCCTtaccagcagcagcaacaagaCTCGCCTCTTACCCCAAGACGGTCGGTTGCAGTTTTTCCCATGGACGGGGTGGGCCACTTGGCCGGTGCCGGCAGTTTGTTCCCACCAGGAAGCACACTCGACCGAAACAGCTCCCTTTTGGCGGATCTCCATGATAGTTTCAAGCCGGAGAGCCTTCACGGCCTCTTTGGCACTGGTCTCGGACATCACTCCAGCAAAAAGGCGAAGAAGCACAGAGCCGAGAGTGCAGATGGTCCCCGAAGATGGTCTGAGCACAGTCGCGGGTTACCCGTGGGTCGGCCTAAAGGTCAGCACAGTGCACCTAGAGGAGGACCGCCCAGGTCATGGACCAATGCTGAACTCACCGAAGCACTTCAGCACGtttggaacaaaaaaatgacgaCCTCACAAGCCAGCCGTATCTTTGGCATCCCCTACAACAGTTTGCTTATGTACGTGCGCGGCAAGTACGGCAAGAGTCTCAAGCTGGAGCAGTTACGCAGGGACTGCACAGGTGCCACCACCGGCGAGGTAGTGATGAATTCTTTGAACAACAACGTCAAGGCCGTCCAACCGCCCACGCAGATGTCACATCATCTGGCGGGTATTCCACATCCTGGTGACGACGCGGGATTCACGCATCCCCTTCTGGGTGGTAATTTACCCCAGGGTTTCTTCCCAGACTTTAGTGCTGCCTTTCCGGTACCCGTTAGCATGGTGCATCTGCTACCACCTAGCGAGCAAAAAGCCTTTGAACCACCACCAACATCAGGACCCATATCCAGCGAACTCACCCCAAGGAGTAGGACGCCTTCACCATCGGCCGCGCACGATCCGCCACCTCAGCCACCGACGCAATCAGCCCCAGCGCTATTACAGCAAAACGGAAATGACTAG
Protein Sequence: MSSAAESPDGMALQSHYSLRWNNHQAHILQAFEALLHAETLVDVTLVCAETSIRAHKVVLSACSPFFERIFAEHPCKHPVIVLKDFPGREVTALIDFMYRGEVRVGREELPGLMRAAESLQVRGLASSEPRPASPPETPTADLLLGEPSTPEGARQGTPEDDDASESATVPPPEPGGFSREHQLARDGLPHMGQLNFSVRELRESCGSPLMPRRKQARPRRRSGELVPQDLSRHHPAPSPSPPSGGSGGGGGGGGGGLNLTNQQRDQPGQQEDMAENLSMKRSLSPLPTEHNIKTESESASSPRGSPLTGTSLQPDGSLQELPAAGFPGVSALSLTPPHHHSEYLTSLGQLAAQWLPNHPQGQLPQGHHPREGSPHNRSHPYQQQQQDSPLTPRRSVAVFPMDGVGHLAGAGSLFPPGSTLDRNSSLLADLHDSFKPESLHGLFGTGLGHHSSKKAKKHRAESADGPRRWSEHSRGLPVGRPKGQHSAPRGGPPRSWTNAELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRRDCTGATTGEVVMNSLNNNVKAVQPPTQMSHHLAGIPHPGDDAGFTHPLLGGNLPQGFFPDFSAAFPVPVSMVHLLPPSEQKAFEPPPTSGPISSELTPRSRTPSPSAAHDPPPQPPTQSAPALLQQNGND

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01474063;
90% Identity: iTF_00296927;
80% Identity: iTF_01474825;