Basic Information

Insect: Trachelus stipa
Gene Symbol: ZNF236
Assembly: GCA_036026315.1
Location: JAYRCB010000469.1:21344-28244[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 24 7.9e-05 0.0076 17.2 1.0 2 23 53 74 53 74 0.98

2 24 7.1e-07 6.9e-05 23.6 1.3 1 23 95 117 95 117 0.99

3 24 2.5e-05 0.0024 18.8 0.7 1 20 123 142 123 145 0.94

4 24 0.00023 0.023 15.7 0.2 3 23 153 174 152 174 0.97

5 24 0.00048 0.047 14.7 3.7 1 23 183 206 183 206 0.98

6 24 9.4e-08 9.2e-06 26.4 1.1 1 23 324 346 324 346 0.99

7 24 0.00042 0.041 14.9 3.3 1 23 352 374 352 374 0.99

8 24 0.049 4.8 8.4 3.9 1 23 380 402 380 402 0.98

9 24 1.8e-05 0.0017 19.2 3.4 1 23 406 428 406 428 0.98

10 24 0.00038 0.036 15.1 3.6 1 23 483 505 483 505 0.98

11 24 5e-05 0.0048 17.8 5.0 1 23 511 533 511 533 0.99

12 24 3.5e-05 0.0034 18.3 2.4 1 23 539 561 539 561 0.97

13 24 0.00012 0.011 16.7 7.2 1 23 567 589 567 589 0.98

14 24 3.7e-06 0.00036 21.4 6.3 1 23 911 933 911 933 0.99

15 24 0.0042 0.41 11.7 1.4 2 23 957 978 956 978 0.97

16 24 8.9e-05 0.0086 17.0 2.9 1 23 984 1006 984 1006 0.99

17 24 6.5e-06 0.00064 20.6 3.5 2 23 1013 1034 1012 1034 0.97

18 24 5.9e-07 5.8e-05 23.9 1.6 2 23 1108 1129 1107 1129 0.98

19 24 0.036 3.5 8.8 5.2 1 23 1135 1157 1135 1157 0.96

20 24 0.00015 0.015 16.3 1.6 1 23 1163 1185 1163 1185 0.98

21 24 0.0018 0.17 12.9 2.9 1 23 1191 1213 1191 1213 0.98

22 24 0.00038 0.036 15.1 1.2 2 23 1451 1472 1450 1472 0.97

23 24 2.7e-05 0.0026 18.6 4.0 1 23 1478 1500 1478 1500 0.98

24 24 1.9e-05 0.0019 19.1 6.6 1 23 1506 1529 1506 1529 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	24	7.9e-05	0.0076	17.2	1.0	2	23	53	74	53	74	0.98
2	24	7.1e-07	6.9e-05	23.6	1.3	1	23	95	117	95	117	0.99
3	24	2.5e-05	0.0024	18.8	0.7	1	20	123	142	123	145	0.94
4	24	0.00023	0.023	15.7	0.2	3	23	153	174	152	174	0.97
5	24	0.00048	0.047	14.7	3.7	1	23	183	206	183	206	0.98
6	24	9.4e-08	9.2e-06	26.4	1.1	1	23	324	346	324	346	0.99
7	24	0.00042	0.041	14.9	3.3	1	23	352	374	352	374	0.99
8	24	0.049	4.8	8.4	3.9	1	23	380	402	380	402	0.98
9	24	1.8e-05	0.0017	19.2	3.4	1	23	406	428	406	428	0.98
10	24	0.00038	0.036	15.1	3.6	1	23	483	505	483	505	0.98
11	24	5e-05	0.0048	17.8	5.0	1	23	511	533	511	533	0.99
12	24	3.5e-05	0.0034	18.3	2.4	1	23	539	561	539	561	0.97
13	24	0.00012	0.011	16.7	7.2	1	23	567	589	567	589	0.98
14	24	3.7e-06	0.00036	21.4	6.3	1	23	911	933	911	933	0.99
15	24	0.0042	0.41	11.7	1.4	2	23	957	978	956	978	0.97
16	24	8.9e-05	0.0086	17.0	2.9	1	23	984	1006	984	1006	0.99
17	24	6.5e-06	0.00064	20.6	3.5	2	23	1013	1034	1012	1034	0.97
18	24	5.9e-07	5.8e-05	23.9	1.6	2	23	1108	1129	1107	1129	0.98
19	24	0.036	3.5	8.8	5.2	1	23	1135	1157	1135	1157	0.96
20	24	0.00015	0.015	16.3	1.6	1	23	1163	1185	1163	1185	0.98
21	24	0.0018	0.17	12.9	2.9	1	23	1191	1213	1191	1213	0.98
22	24	0.00038	0.036	15.1	1.2	2	23	1451	1472	1450	1472	0.97
23	24	2.7e-05	0.0026	18.6	4.0	1	23	1478	1500	1478	1500	0.98
24	24	1.9e-05	0.0019	19.1	6.6	1	23	1506	1529	1506	1529	0.96

Sequence Information

Coding Sequence: ATGTCACTCACCATAGAGTGCCTCGATTTCGCACTTCTGGTTATCTGCACACGAGTTTTTCACTTTGCGCTAGGACTCAGCGCTGAATACTATAAGgcaCAGCTTGATGCACATTTGAAACTTCACAATGAAAAGTGGTCAACCGAGGATGTGCGAAAATGCAAGCTTTGCAATAAACAATTTACCCAGCCAGCCCTTTATCGACTTCACATACGAGAGCATTACAGAttgcaAACCAAAATAGTAAAACACACAAAAAGAGGCACGAAGCACAAAACTATGTATAAGTGCAAAATATGCTTAAAGTCTTTCCAAAAACCAAGCCAGCTGATGAGACACATTAGAGTGCATACTGGCGAAAAACCCTTTAAGTGTAATGTCTGTAGTCGAGCTTTCACACAGAAAGGATCTCTACAAATTCACATGTGGAAACATAACGGCATACGGCCCCATGGATGTACATTATGCAGTGCCAAATTCAGTCAAAAGGGTAATCTGAATGCTCATATACTCAGAGTACACAGCGTGCCAGAGGGCGAACCAATTTATAGATGCACCTATTGCTCTTGCGTCTTCAAAAAACTGGGTAGCCTCAATGGACACATGAAAAGGATGCATTCAAATCCCGTGGAGGACAAAACGAGTTGCGACCATCCTACGGAAGCAGATATGCAAGCCACCGTGGACACTGTAATCTCACAGTTAGCCTCGTTGGAGTCTGGCATAAAGCATTCAATGAATCCAACCGACAACACAGCAGTCCAAACTTGTAAGAATGATATCCTTCAACAAGCACTGAAGAACAGCGGACTATccagtaaagagaaaaatttaaacaccAATGGTGCATCAAGCTTGAAGAAAGTTGAGGCTGAGACTACTTTAGTGACTCTATTGGACAGAAGTACTGATGGTTCCATGAGGAAGTATATCACAATTAAGCAACGGAGTATAGGAAGTATAAGATGGTACACGTGTTCCTACTGTAATAAAGAATTCAAGAAGCCATCTGATTTAATACGTCATTTACGGGTGCACACACAAGAAAAACCTTTTAAGtgttcGCATTGTTTTCGCTCATTTGCTTTAAAGTCCACAATGATCGCACACGAACGTACTCATATGGGTGCAAAAAAGTATGAGTGCAACTCGTGCGATAAATTATTTGCGTGTCATAGCAGTTTCACAGCTCACATCAGattGCACGCCAAGTCTCATAGATGCACTATTTGTGATAAATTCTTCACCTCGAGTACAGTCTTGAGAAGTCATATGAAGATTCATACGTCAGAAAACTCCCAAATATCGGCCGAGGCGGAAGTTCTGGCGCCGCAAATCATCCTGGAGGAACCGCTTATTATTAGCGATGCCGGAAATAAAATCAGTGTTGCTCAGGTTCAATCGAAACAAagacaaatttataataatggtGATGTGGCAAGACCACATAAATGTTGGGTTTGTCCTGCGGCATTTAGAAAGATCAGTCACCTAAAACAGCACTATCGGAGACATACAGGGGAACGACCAtacaaatgtcaaaaatgcGATAGGAGATTTACTTCGAACAGCGTATTGAAATCTCATTTGCATACTCACGAAGACTCAAGACCTCATAGCTGTTCCATGTGTGGAGCAAAGTTTTCCACACAAAGTAGTATGAAGAGACACTTGGTGACTCATAGCAACAAAAGACCATTTATGTGTCCTTACTGccacaaaacttttaaaacgTCCGTCAATTGCCGAAaacatatgaaaattcataaacacGAATTGGCACAACAgcaATTAGAGCAGCAGAGAACACCACAGACATCGCAGCTCCCTCTGATAGAGGATAAACGTGAAATTACCTGTTTGCCTGATAATCTTGAATTGACTAATGAGATGGAAGTAACGTTTCAGCCGCAAATTACTCCGGATTTTACTCAGGCATTTTCGGATCAATTCCAAGGTATCGCTATGGACAAGGACAAAACATTCCTCTCTCAAAATGATACAACGCAACCGATAGTGAGCGAAAGTTTATCTGAAGCGGACACGGTCCCTTTAGGATCATCACAGACCTTGCATGCTGATGAAACTGGCACTATTACACTTCCTAACTATTCTGGCGATCAAACATTAACACCGGAAAGTATAcgagaaattgaagaaacatTAAATCAGCAGTTATTTAATATAGGAATGAATTTAGGTTTAGAAAATAATCTAACGAGGCAGATTAACGAGCCCAGTGCGGTCTCTTTGGATATGAGAGAGCAAcctgtattaaatataatttacgaCAATAACAAAGGCATAGAATCGTCAAGTTCTAGTGCAATTACTGGAAATATGTTTCCCACACAGTTCGATACGTTTGATATGAGTCATATTGCTTTGCAGtctGACACCGAACTAGATATAGGAATTAGTTCAGCTAATTCGACAAGTATGGCTAGTATTTTGCCACGATCAGCACAAGAAGAACAACGTCTCGTACCAGCAAAGACAACAGTCAATATTGAGGATGGACAAACAAAAGCATCCAGACACCTCATGGTTATAAGTTCGACGCAATCTTGTCCAGAATTATCACGACCTGTTCAAGCTTGTCCAAAATACCCTAAAGTCATTGCAAAGGCTGACACGACGGATGaattggaaattcaaaatgtcgacaatgaagtaaaaaatcgaggtgaaatgaaaatagttgACAATCATGATGAAGAAATTGCGACGTTTACGTGTGACATATGCGATAAAATCTTCCATAAACAAAGTCACCTAAAAACTCATATGAAAACTCATATATTACATGAAAGTGTCGATCGAAATAAAGACGATTTGATAATAGTTAGCGAAACAGATTCCCTCTTACAGTGTCATATGTGCAGTAAAAAGGGTTTCACTGCAGCCGCATTGAAAGAACACTTAAAAACTCATCGGGGCACGAAGGAATTCCAATGTACAGAATGTTCCTTAAGATTCTGTACAAACGGTGGATTGAGTAGACATCTAAAAATGCATGCAAGCAGACAacaATGGAAATGTACGATTTGtaacaaaacattttcaagtaaaatacatttgaaGTCCCACCGACAAATCCATGAAATCAGCTGGAATACGAATTCAGTAGAGCCTGATAGTTCGCAAAAAGAACCATTAGCGAGAAGCACAGATTTTCTGTCAAATTTTAATCTTGACGTTACCACTGGAAACGATTCATCAGTTTCGCAAAAAGTCTTACTCGATACGGTAGCAGAAAAGGATATAATCGATCattcaaatGAACAacatgaaaagaaagagaaacaagagTATACGAACAAGTGTAAATTCTGTCCGAAAACATTTCGGAAACCAAGCGACCTAATAAGACATGTTCGTACGCATACCGGAGAACGACCGTATCAATGCGaatattgtaacaaaagtTTTGCAGTAAAATGTACATTGGACTGCCATCTGAAAGTGCATACagggaaaaaaacattttcgtgTCATGTATGCAACAGTTTATTTGCAACTAAGGGCAGTCTTAAGGTCCATATGCGACTCCACACagGTTCCAAGCCATTTAGGTGTCTGCTGTGTGATCTACGATTCAGAACCTCGGGACACAGAAAAGTTCATCTACTGACCCATATGAGAGAACACAAAGGCGGGCCAAAGCGAAAACCAAAGCATTCGAAGTTCAGCACAATCGCAGGTGTCGCTGCAGAATTGGAGAAGCCAGTAGAAAGTGAAATAAACGACGACACTACCATAATTAGTGAGGGTGCACAACCAACCGAGTATTCGAATCTCGATTCAATTACTATTGACACTTCAGAACTTACCGATCAAATTACGTTTAATGCCGATGGCACAATATTGAACAACAATTCCATGTTGTCAGTCAATGAAAGTAACCAATTGGTAGCCAATTTGCATTTCCTCCTTGCGAATGGTCTTGTAACTATTCAAACCGATGAGTCACTTTTACCGCATCTCCCAAACAGCGATACTCAGGTCATCCAAACTGAAACTAACATCACTGAACTCGTCACGTCTGAAGCGCTAGAACACGTAACCTGCACCGATACAAATTCTAACATCGGTATAACGACAGGACCGTGCAACGCCCCAATTTCAGAGACTGTTTCCCGAACTGCTTCTGAGACTATTCCTCAGAATTTATCCAAAGAAATTCCACAAACCGTTAGTGATGTTTCTGAAGCAACGTTACACCTTGATCAGTGTACAAAGTTGATACAGGTGGATAATGGAGATATTAACGTGAATATGGAATTAAATAAGGACGAAAACGTACAGAGTGTTCTTAAACAAGGAGCACAGAGTAGTCAATCCCGCAAGGAGTGCGATATTTGTGGAAAGGCATTTATGAAACCGTGTCAGGTGGAGAGACACAAACGAATTCATACCGGTGAGAGACCTTATAAGTGCAATTTATGCACCAAGTCGTTTGCCCAAAAAGCAACATTACAAATGCATCAGAAACATCACACTGGAGACAGGCCCCATCCTTGCCCCCATTGCGATTACTCTTTTACACAGAAATGCAATTTGCAAACTCATCTGAAGCGTGTCCACCAGTTGGACACCTTGGAGGTAAAAAAGTTACGACGCGGTCAACAGGTATTGAGCGCGAAGTCAATGCAAGATAATTTAGATGATACTAGAATACTCAGCTTGGATGATATTTCGTTTGTGGACTTTTTGAAGTAA
Protein Sequence: MSLTIECLDFALLVICTRVFHFALGLSAEYYKAQLDAHLKLHNEKWSTEDVRKCKLCNKQFTQPALYRLHIREHYRLQTKIVKHTKRGTKHKTMYKCKICLKSFQKPSQLMRHIRVHTGEKPFKCNVCSRAFTQKGSLQIHMWKHNGIRPHGCTLCSAKFSQKGNLNAHILRVHSVPEGEPIYRCTYCSCVFKKLGSLNGHMKRMHSNPVEDKTSCDHPTEADMQATVDTVISQLASLESGIKHSMNPTDNTAVQTCKNDILQQALKNSGLSSKEKNLNTNGASSLKKVEAETTLVTLLDRSTDGSMRKYITIKQRSIGSIRWYTCSYCNKEFKKPSDLIRHLRVHTQEKPFKCSHCFRSFALKSTMIAHERTHMGAKKYECNSCDKLFACHSSFTAHIRLHAKSHRCTICDKFFTSSTVLRSHMKIHTSENSQISAEAEVLAPQIILEEPLIISDAGNKISVAQVQSKQRQIYNNGDVARPHKCWVCPAAFRKISHLKQHYRRHTGERPYKCQKCDRRFTSNSVLKSHLHTHEDSRPHSCSMCGAKFSTQSSMKRHLVTHSNKRPFMCPYCHKTFKTSVNCRKHMKIHKHELAQQQLEQQRTPQTSQLPLIEDKREITCLPDNLELTNEMEVTFQPQITPDFTQAFSDQFQGIAMDKDKTFLSQNDTTQPIVSESLSEADTVPLGSSQTLHADETGTITLPNYSGDQTLTPESIREIEETLNQQLFNIGMNLGLENNLTRQINEPSAVSLDMREQPVLNIIYDNNKGIESSSSSAITGNMFPTQFDTFDMSHIALQSDTELDIGISSANSTSMASILPRSAQEEQRLVPAKTTVNIEDGQTKASRHLMVISSTQSCPELSRPVQACPKYPKVIAKADTTDELEIQNVDNEVKNRGEMKIVDNHDEEIATFTCDICDKIFHKQSHLKTHMKTHILHESVDRNKDDLIIVSETDSLLQCHMCSKKGFTAAALKEHLKTHRGTKEFQCTECSLRFCTNGGLSRHLKMHASRQQWKCTICNKTFSSKIHLKSHRQIHEISWNTNSVEPDSSQKEPLARSTDFLSNFNLDVTTGNDSSVSQKVLLDTVAEKDIIDHSNEQHEKKEKQEYTNKCKFCPKTFRKPSDLIRHVRTHTGERPYQCEYCNKSFAVKCTLDCHLKVHTGKKTFSCHVCNSLFATKGSLKVHMRLHTGSKPFRCLLCDLRFRTSGHRKVHLLTHMREHKGGPKRKPKHSKFSTIAGVAAELEKPVESEINDDTTIISEGAQPTEYSNLDSITIDTSELTDQITFNADGTILNNNSMLSVNESNQLVANLHFLLANGLVTIQTDESLLPHLPNSDTQVIQTETNITELVTSEALEHVTCTDTNSNIGITTGPCNAPISETVSRTASETIPQNLSKEIPQTVSDVSEATLHLDQCTKLIQVDNGDINVNMELNKDENVQSVLKQGAQSSQSRKECDICGKAFMKPCQVERHKRIHTGERPYKCNLCTKSFAQKATLQMHQKHHTGDRPHPCPHCDYSFTQKCNLQTHLKRVHQLDTLEVKKLRRGQQVLSAKSMQDNLDDTRILSLDDISFVDFLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01395274;
90% Identity: iTF_00293894;
80% Identity: -