Tsti002429.1
Basic Information
- Insect
- Trachelus stipa
- Gene Symbol
- ARID5B
- Assembly
- GCA_036026315.1
- Location
- JAYRCB010000193.1:147934-154543[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.6e-23 3.9e-20 72.6 0.0 1 89 244 330 244 330 0.95
Sequence Information
- Coding Sequence
- ATGGGTTGTAGCAGCCAGAGGGTTGTTGGAAACAACTTGGAAGGAAAGGACGAGGTTCTCACAATCTCGGAAAAGGTGGTCGTGCGTGTTCATGATCTGGTCACGTGGTTGTCTCCGTCCCTGGAGTGGTCCTGCGGCAGGGAAGTCTCCTGTCCCCCTGCACCGACCTCATCTCCAGAGAACAGTCCCTTAAAACCGGAGATTCTACAGCCACAAGTGCTGACCGATCCTGGTATCGACTTTTCGGACGTGGAGAAGCAACAAAAAGAATACGAGAACAATTGCGGCTCgtcgaagaaaaatgaaagcaaCAATCAGCCAAGAGTCGTAGTGCTATCGTATCCCAGGTACTGCCGGTATCGAGCTCTACTACGTAGACTAGAGGGTACCGAGCCATCTTGGTTATGTTCCTCCGTGGCAGCTGCACTTGGTGGTTTCACGGCGTTACCCGGCACCAGGGTACTTTTCTGCAAGGACACTTTCGACTACCCTGATCTGGAGACACACGAGTTACTTTGCAATCACTTAgcacCAAAATTGAAGGGCCGGCCTCGACGAAAGCGTAAAAAGCGCAGCGCTTCTCCTGGTGAATCGAGCAACGAAAGCGAAGCGTCGGTGGCGTCGGTGGTCGCCTCGACGTCACGGGGCGCCCCGACGTCCTCCAGCCTCGTCCAAGCTCTCCGGCCACCCGCATCCGGGGTACGTCGTAGCGAACGAAAAACGAGTGCAGAGGAGAAGAGGTTCCTGGCCGATGTACAGACGTTCATGAACACCCGGGGCACGCCGGTCGGCAAAATGCCTTTATTGGGATACAGACAGaTTGATCTGTTTCTATTCTACACGAAAGTGCAGACCTTGGGTGGATACGATTCCGTTAGTGCCGGACGCCTATGGAAATCTATATACGATGACATTGGCGGCAACACTGGATCCACCAGTGCTGCTACCATCACGCGAAGGCATTACGAACGATTATTGCTACCTTATGAAAGACATCAGAAGGGAGAAGAAACAAAAGTCAGACCTACCCACGGTAGGCGTACCAAGTCCAGCAGTATGTCCGAGGACAATGTAGAAATAAAACAGGAACCTGGGGCATCGCATCCCTCTCAGACACCACCGCCACCTCCGGGGACGCCGACTTCTACGGCGGTGACGCCACCGCCATTACAGTCCATTCTTTCATcgccCTTCCTACCGGGAGATAAACCCAGAGCGGAAAGTGGAAAGACGTCCTCGTTGCGTAGCGTAAGGGTGAAACCGGAACGCCTTAAATCGCTGAACACGATAATAGCAAACAGTACATCACCCGCAACGCAGAGTAGTCCGTTACCGAGTCCTCCTCCGTCGGTAAATACACCGACGTCAACGCCGTGTAGCACGCCCTCGACAACCCCGACGGGAGGTCAGAGCGTGTTGGAACGGCAACTTAACAGCCCGTTGATGTCGCAACAAGTGGCTCCAGGAAGTCCTCCGCCGACTAGTCTGCCAGTAGTAACGACGGTACCAAACCCAACTAACGCATCGACCGTCGTTACGTTAACCCCACCACCGGAGAAGGACATAAAGGAGATGAAACTGGACCCGAAGCAGACGTCCCTGCTGGCTCAGGGTAAAGAGAACATACCGCTCTTCGGTGAAAAGCCAATAGTCCCACCCAGGTCGCCGGAAGTTATCGACCTGGAGACCGAGAGCGATACCAGCAGAGACAAGATCATCATTCCCAGCTTTAAGAAGCGAAAACTCGAGATTCTGCGCGAAGGCGGACTCGAGGTCACTGCCGTGGAATTGGACGCTAGACCGAGCGTCATCCAGGCGACTGTAGCGCCGGTTTCCATGGCGCCGACGCTTAACGCTAAAGCCGAAGAAAAGACTGCCTCGCCGTTTCCCACGCCTGTAACGACGAACTCCATACCCAAACTCATTTCCGTCACAGTCACACCGGACATCAGTCATATGCTACCTTCGCCACATGAGAGTCCCAGTCCGAATCGACTGCCAACGCCTACGAAGCAACCATCAATTAACAACAATAGTCATGCCcatcacaataataataacaccTCGttgaacaacaacaacaacaacaacgtgGCAAACAGTAGAGTCATCAATTTAGGCAGTTCGAATAACGCGACGCTTCTGCAGCTCTATGCCAATGCAAATGCCAATCCAGTAGCGACGTCTCCAAGTAATAGTAATCATCGGTTCGTTCCTCCGGGTTTACCTAACGGCAGGATAGTACCTCCAAAGGTAACACAGTCCAGGTCCATCTTCGCACACAACGAGAGGACGGTCTACGGGAATCCAAAGGATATTTTGATACCAACCAAGTATCCTCATCAGCATCCACAGCCACCCCCTCACCCACCAAGGAGCAATAATCAGAGCAGTGGGGTGTTAGACCTGACTCAAAGACCAGGGGAGAAGCAAGCCTTTTCCAGACCTAGTCTCGAGATCGTAAGGGTGCCAATAGTGCCCAGACCCAATCCcttaaatttagaaatgaaaaataacgtcAGGGACAAGCAGCAGGAACCCCAAAAGAAGTCGTTCACACCTTATCCAAATATGCTCGACAGTAGAACAATGATATCCAATAATCTGGAGATCACTCTGGTGAATCCCAAGCAAAAGTCTCATCCTGCTGGTACACCACCTCACATACCTCCGCAGCATCAAATGCCGCCAACCCCGACAACGCGAAACAACGTAATGCCAACTCAGAGGAGGCAACAAGCAAACGGGAAGTATCCACCAAGGAGCGAGCCGGTCTCCCCGTACACACCAAGAAAACCAAATCATCCAGTAATACCAAACGTGCCGAATCTAAGCCAGCTGAACAGTGTAGCCAATGCGTCCTACGGCCGTGCGACCCAGCAACAAATGGCCATCGAGAGGAGAAAAGCCGATGCAACCAAGGAACATCGCAGGACAAGCGAAGGCGATAGGTCAGCAATGatacaacaacagcagcaacatcatcagcaacagcaCGAAGCTGCCAATCACAGACAATCGTCGGACTCCTCGCGTCGACACAGCGTACCAAATGTATCCACTGGCTTGATGCTGGCTCTGCCGCAAAATCCTGCCTTTCTTTCGCAGCTGCCAAACCCAGCTGGAAAGTTCCTGCCGATTTTTGATCCCGTTTATTATCCAGCCTTCTACAACGGTCTCCTTCCACCACCAATGGCGCCTGCGTCAACTCCATTCCTCGTACCGGAACTGAGCACTTACTACAAGGAGTTATTAGCCTCCTCGCAACCAAGACTGGCGATGGCCGGACAGCATCAACCTGCTGTCCCAACGTCCAAGTAG
- Protein Sequence
- MGCSSQRVVGNNLEGKDEVLTISEKVVVRVHDLVTWLSPSLEWSCGREVSCPPAPTSSPENSPLKPEILQPQVLTDPGIDFSDVEKQQKEYENNCGSSKKNESNNQPRVVVLSYPRYCRYRALLRRLEGTEPSWLCSSVAAALGGFTALPGTRVLFCKDTFDYPDLETHELLCNHLAPKLKGRPRRKRKKRSASPGESSNESEASVASVVASTSRGAPTSSSLVQALRPPASGVRRSERKTSAEEKRFLADVQTFMNTRGTPVGKMPLLGYRQIDLFLFYTKVQTLGGYDSVSAGRLWKSIYDDIGGNTGSTSAATITRRHYERLLLPYERHQKGEETKVRPTHGRRTKSSSMSEDNVEIKQEPGASHPSQTPPPPPGTPTSTAVTPPPLQSILSSPFLPGDKPRAESGKTSSLRSVRVKPERLKSLNTIIANSTSPATQSSPLPSPPPSVNTPTSTPCSTPSTTPTGGQSVLERQLNSPLMSQQVAPGSPPPTSLPVVTTVPNPTNASTVVTLTPPPEKDIKEMKLDPKQTSLLAQGKENIPLFGEKPIVPPRSPEVIDLETESDTSRDKIIIPSFKKRKLEILREGGLEVTAVELDARPSVIQATVAPVSMAPTLNAKAEEKTASPFPTPVTTNSIPKLISVTVTPDISHMLPSPHESPSPNRLPTPTKQPSINNNSHAHHNNNNTSLNNNNNNNVANSRVINLGSSNNATLLQLYANANANPVATSPSNSNHRFVPPGLPNGRIVPPKVTQSRSIFAHNERTVYGNPKDILIPTKYPHQHPQPPPHPPRSNNQSSGVLDLTQRPGEKQAFSRPSLEIVRVPIVPRPNPLNLEMKNNVRDKQQEPQKKSFTPYPNMLDSRTMISNNLEITLVNPKQKSHPAGTPPHIPPQHQMPPTPTTRNNVMPTQRRQQANGKYPPRSEPVSPYTPRKPNHPVIPNVPNLSQLNSVANASYGRATQQQMAIERRKADATKEHRRTSEGDRSAMIQQQQQHHQQQHEAANHRQSSDSSRRHSVPNVSTGLMLALPQNPAFLSQLPNPAGKFLPIFDPVYYPAFYNGLLPPPMAPASTPFLVPELSTYYKELLASSQPRLAMAGQHQPAVPTSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00770154;
- 90% Identity
- iTF_00770154;
- 80% Identity
- -