Basic Information

Insect: Trachelus iudaicus
Gene Symbol: -
Assembly: GCA_030142595.1
Location: JARQTH010000002.1:43785-50244[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 1.4 94 3.8 0.1 1 23 115 140 115 140 0.95

2 18 0.072 4.9 7.8 5.6 1 23 147 170 147 170 0.97

3 18 0.028 1.9 9.1 0.6 2 23 186 207 185 208 0.95

4 18 6.3 4.4e+02 1.7 3.7 1 23 214 236 214 236 0.97

5 18 0.04 2.8 8.6 0.5 2 23 242 263 241 263 0.97

6 18 2.2 1.5e+02 3.1 1.3 6 23 517 534 515 535 0.84

7 18 0.0014 0.099 13.2 4.9 2 23 546 568 545 568 0.96

8 18 2.7 1.8e+02 2.9 1.0 1 23 632 654 632 654 0.82

9 18 0.081 5.5 7.7 0.1 1 23 894 916 894 916 0.94

10 18 0.019 1.3 9.6 0.3 1 23 924 946 924 946 0.98

11 18 0.22 15 6.3 2.3 2 23 1042 1063 1041 1063 0.96

12 18 0.0037 0.25 11.9 0.2 1 23 1172 1194 1172 1194 0.98

13 18 0.042 2.9 8.6 0.3 1 23 1269 1291 1269 1291 0.97

14 18 6e-05 0.0041 17.5 0.6 1 23 1297 1319 1297 1319 0.97

15 18 0.0072 0.5 10.9 2.6 1 23 1368 1390 1368 1390 0.97

16 18 0.00053 0.036 14.5 1.4 1 23 1396 1418 1396 1418 0.99

17 18 0.14 9.7 6.9 0.2 2 23 1513 1534 1512 1534 0.97

18 18 3.7 2.5e+02 2.4 0.1 3 23 1543 1563 1542 1563 0.87

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	1.4	94	3.8	0.1	1	23	115	140	115	140	0.95
2	18	0.072	4.9	7.8	5.6	1	23	147	170	147	170	0.97
3	18	0.028	1.9	9.1	0.6	2	23	186	207	185	208	0.95
4	18	6.3	4.4e+02	1.7	3.7	1	23	214	236	214	236	0.97
5	18	0.04	2.8	8.6	0.5	2	23	242	263	241	263	0.97
6	18	2.2	1.5e+02	3.1	1.3	6	23	517	534	515	535	0.84
7	18	0.0014	0.099	13.2	4.9	2	23	546	568	545	568	0.96
8	18	2.7	1.8e+02	2.9	1.0	1	23	632	654	632	654	0.82
9	18	0.081	5.5	7.7	0.1	1	23	894	916	894	916	0.94
10	18	0.019	1.3	9.6	0.3	1	23	924	946	924	946	0.98
11	18	0.22	15	6.3	2.3	2	23	1042	1063	1041	1063	0.96
12	18	0.0037	0.25	11.9	0.2	1	23	1172	1194	1172	1194	0.98
13	18	0.042	2.9	8.6	0.3	1	23	1269	1291	1269	1291	0.97
14	18	6e-05	0.0041	17.5	0.6	1	23	1297	1319	1297	1319	0.97
15	18	0.0072	0.5	10.9	2.6	1	23	1368	1390	1368	1390	0.97
16	18	0.00053	0.036	14.5	1.4	1	23	1396	1418	1396	1418	0.99
17	18	0.14	9.7	6.9	0.2	2	23	1513	1534	1512	1534	0.97
18	18	3.7	2.5e+02	2.4	0.1	3	23	1543	1563	1542	1563	0.87

Sequence Information

Coding Sequence: ATGTCAGGACGACTTCCTCGGCTGCGTGCGCTACGTCCTCGACCTCAGCAACATCTTCAGAATACACCAGCACCTACGAAGACCGAGTCTAGGTATAataaggaggaggaggaggaggaaattAATGACGAAGAGGACGAGTTGTTGGTTGAAGATGAGGAGGATATTGTGGGGGctgaggaagaggaggaagaggatgagaTTATTGATGAACAGGAACTTGAGGAACAGGAGTCTGTGAATCATGATAGATTTAAGAGTGATGAAAGTGAAAAGAGACTTGTCATTAAAGAGGAACCTGTGGAAATTGTCACTGAGGAACCGGAGGACTCTGAAAGGAATTATGAGTGTAAAACCTGTAACCCACCTAAGGGTTTATCCAATCTAAAAGCTTATCTTGCACATCTTAAGAATGAGCATAAACAAAAGgTCAAGTGCTATGAATGTCCCCACTGTGAATTTGTTTGTCAGCACGTAAAGAAATTGCAAAGGCACTTCCGTGTTGCTCATGAGGATCTTCAGGACAAGGTCGCAGCTGAATCCGCGGAAAGAAGTCGCTGTCCAATGTGTGCTCACATTGCAGCCAATCCTCAGGATCTCGAAACCCATCAAAGAGTCCATCACTTGAAACGACGTTTTTTCAGATGCGCCAAGTGTTCCTACGTAACACACGTTCGTGCTCGTTATACAAAACATGTGAAATATCATTCGATGCCAATGATAAAGTGCGACGCTTGCGATTTTCGTACTCCATACAAGTGGAATTTGGATCGTCACACACGCAATCATGGCGGAGGTGGAGCCTTTCAATGTAGAGCCTGTAATTTTACAGCAGACATTCGTCAAAGCTTAACAGTACACGAAACCAATCATCATGAACCTCCTGTAGGACGAACTCCTCGCAAGATGAACACACCTTTTGAACGCAAACCTCGTAATAGTCCAAAGCGTTATAACCAGGTGGGTGCAAGTGATTTTCGAGATACAGCGACTGGGTCGAACAATCCAGAAAAACAGAAGTCTGGCAGTCCGGCCAAGTCTTTGTCTCCAGACAAAAACTTAAGTTCACCCGAGGACAGAAGAAGTGCCATTGCCGGTGCAGATTGCATCGCCCTCAAGTGCGAAGAGAACGGTTGTCAGTTCATCACCGCCTGGGATTCGAAGATGCAGCGACACTTGGCAGAATCTCATTCACAGAACGCGGCAAATAAACCCAAGAAACCATTACCTATGCTAATACCACTGAGTCCCGCGAGCAACGCCAAAGCTAACAATGCTGGAGCCAGTGGTCCGGGTACGACCTTACTGAAGGTTCCCCGGGTGAGAGTAAGACCAGAGCTAGCTCGAATCGCGCGTGATACAGAAATGGCACGGCTATATGGAAACAAGGAAGCGTCCGAGCTGAAGAAGGAGGCTGGTACGACAGATTCCTTTGAGAAAAAGAACGCCTCCTTCTTCGACAAACTGAAGGAGAGACTGATGACGACTTCCGGGAACAATGGGATAGCTGAGGTGGCCGTAAGTAGCCAGAATGATTTGAAGTGTTGGTGTACCTTCGAAGCGAGTAGCCTCGAGGAGCTGACCAGTCACAGACGGACTCATCACACTGCTCTCAGTGTGTCCCTTGGCACTTCGCGTTGTCCTAACTGTAGAAGACGTTGTAAGAGCTCGGCTGATCTGCAAGTGCACATGCGCCTCTGCCATCCTACGAGCAATGATTATGCAGCTACCGATAATAGCCTGGAAAACTCCACGGGTTACACGGAACTTCGGACCGCTTACCGCGGTGAATACGCGTTTCCGTTTCAAGTGGACTGGGATGCGAATTTTGGAGCGCTCAATTCTTCTGGATCCTCGGTCGAGGGTGGCTCTACGCCGAGTGGACGACGGGTATTCAAATGTCCCCACTGCCCGTTCTGGGCTTCAACGGCCAGTCGCTTTCACGTACACATTGTGGGTCACTTGAATCGGAAACCATTTGAATGTTCACTCTGCGCCTACCGCTCGAACTGGCGGTGGGATATCACAAAGCACATCAAACTTAAGGCAGCTAGAGATCCTGCGCATATGTGCGCCAGGGTTCTCATGACCGATGAGACCGGTCGGCGCAACTACTCCAAGTACAACAAGTATCTCGCTCAGaTAGAGCAGCAGTCGGGAGATGAACGCATTTACGGGGAACGTACTGGTGAAGACCGTACCTCTGATGAACCACCAACTAAAGTCCTTATTATGAGTGATACCAAGGAGTATCCGCAACCTCCAGAACTTACTCCAGCACCTGTTTCACTCCTAACATCCACAAATTCCGCGAGGGAGATCTCGGCATTACCCTTGCGACCTCCGCCACCCTTAAAGGCTGCTACCCGAAGTCAGGGTCAGTCGCTCCTGAAAAATAATCCTGCTGTCTCTAACGCCAACGCGACTGTAACGCCGACTGCAGGCGCTGCTGCTTCCTCTAGTACAACTGCGGCTGTCACCGCGCTCGCAATAACGCAGGCGACTGCGATGGCACCTTCGAGGTCTTCTCCGCCGGGTTCCGGGTCAGAGGAGAGTAAACGCACATTGTGGAAGTGTAAACGATGTAACTTTCGCGATTCTAACAAGGAGACTGTGTTAATTCATGTTAAATCTCATTATGAGTCTATGGATGATGTTGCTGAATCTGAAAAGaaTGCCTTTACCTGTGAGGATTGTCCTTTCTCAGCTGCTGATGCGGAATCCTTGGCACTGCATCGTGTACATCATAGACCCAATCTTGAAGCCATATTTAAATGTTACCTCTGTCCATACTACGTTAGCACCAAagtAGAGCTCTTGGATCATGCTCGATTACATGGAGAGGAATTGGCTGTTGTTCACCAGAGAAATATAGAATCTGATTCATCACCTTCTGAACGTAAATATTCTCAGAATCATCGTACAATTCTAAcGAACAGCCAAACTAAAGAGGAATCATCGATGGAACAAGTTATACACATAACATCCCCAAGCACTTCGACTTCAGGTTCAGTTTCATCAAAGGGTAACGAAGCTCCACCTCTTCTCTTGGATACGCGCGCCCTTCCTGATGCACCGTTAGTGTGGGTATCGCGAACAGATGGAACGATtgcaaaaatgttaaaatgcCGACACTGTCCGCACGTATCATCACGTCGAGCCGAGGTCCGCGATCACGAGAGTATGCATATGAACTCACCCAACCAGGGCTCTCTCATAGCTTGTCCAAGCTGCAGCTTCGCTTGTTCGCGAAGAGAAGTCATGGATTCTCATGCAGAGATGCATTCGGGCGCCCTGGGGACTGTGCACTGTCTCGTTGACGAGGGTCGGACTGATGCTCAACAGCTCAACGACCTCTCCACCCTCCTTGGACTTCCACAACCCATATCCGTGGCTTCGGAACCTGATTTGAGGGACTCCAGGCTGGTTCACTGCTGTAGCAAGTGTCCTGCACGCTTCCTGTGCGAGAAGGAGCTCAGAATTCACCTGCGTTATCACTGTACCGAGCTAGCCTACTCCTGCCAGTGGTGCTCGTACGCTGCTCGACAACCAGCTCATCTACTGGCACATCAGAAAGCACATTCACCCGAGTACCAGGACCGGACACGTTACCTGCTCTCCCTGTATGGCCACTCGCAGAGATATCCTCCTCCTACGACGGCGTGTGTCGAGGCGAACACTCAGGACTCCGCAGAGGGTAACAGTGCTAACGTCGCTTGGATCGTCGTCGAGGTAGGGACAGGACGTAGCAATGTTCTGACTAATCACCTCACGACTGGCAGTCAGGAAACCGGAAACCAAGTGTTCACCTGTGCCAAGTGTCCGGCGCGATACTTTAAACTGGACGCCCTGGAGTATCACATGACTCTTCATGGTACAAACAATAGGTTCAAGTGCACCGAGTGCGATTACTCGTCGAAGACGGCTCAAAATCTGGTGAAGCACCAGGTTGTTCATCGTCGGCACGCCGAGGCTAACGAGAATGTGACGTCTTCCAGACTGCTACCACCACCCGATCCACAGTTCGGCATCCTTATGCGTGGTAATCCTAACTTTGTGTATCCAGGATACCTGAGGAATGGCCGACTTCGGGAGAAACGGTACAAGTGTCACAAGTGTCCGTCGGCTTTTGAAAAACGTGAACAGTATAGGATTCACTTGACGTTACATGGTGCCAAGCAACGATATCGCTGCGATACTTGTGATTATTCGGTAAAATATTACGCTAATTATGCTCAACACTTGAGAAAACACCAAGCCAATGCCCAGGCACAGGCGTCTCGACGACGATACGAGGACGATGCTATAACTATTGACGCTGGAATTCAATCGGATAGCTCCATATCTATATCTCGCTCAGGCAAATCCTTAACCAAGTCCTCAGCAGGTTCCTCCGCAGCTGGCAATATCTTGGCTGGTGGTAGTGCAGCGAATTCTGCCGTTTTGCAAGTTTCTAACCAGGACAAGCAGTCGCTGATGCTCTTACAAAAGAAGGGTCTTCTGGTGGCACCCAGTGAAGCTGAGGCAGAAAATATTCGCTGTCAAGACTGTCCTTTCAGTACTCCTGACAAGGATGTCATGGATGCTCATAAGCGTCGCCATGGTATCGAGAGGATGACACCTCCTTGTCCTCACTGCGACTACGTACCTCGCAAGGACGAAAACGTGGGCGATCATATTCGTCTTCATTTCACCAGGCTCTACAAGCCAGACTCTTATCTCATCGCTGAACTGCTCACCCTGACGATGCGTCGCGTTCCTGGAAACAGCAAAGAGGACGCTAAGGAAAATGAATTGCTGTTCAAGGAATGTGCCGATGGGAGATTTCTACCAATAGTTGACCCGAGCACGTCCTCCAGGTCTTTATCTCCCAATGGAAACAGCGTGCAAGAGAAAGTCATAGTGGATCCTAACACAGGTGAAGCCAAGCAGCACCTCActgtataa
Protein Sequence: MSGRLPRLRALRPRPQQHLQNTPAPTKTESRYNKEEEEEEINDEEDELLVEDEEDIVGAEEEEEEDEIIDEQELEEQESVNHDRFKSDESEKRLVIKEEPVEIVTEEPEDSERNYECKTCNPPKGLSNLKAYLAHLKNEHKQKVKCYECPHCEFVCQHVKKLQRHFRVAHEDLQDKVAAESAERSRCPMCAHIAANPQDLETHQRVHHLKRRFFRCAKCSYVTHVRARYTKHVKYHSMPMIKCDACDFRTPYKWNLDRHTRNHGGGGAFQCRACNFTADIRQSLTVHETNHHEPPVGRTPRKMNTPFERKPRNSPKRYNQVGASDFRDTATGSNNPEKQKSGSPAKSLSPDKNLSSPEDRRSAIAGADCIALKCEENGCQFITAWDSKMQRHLAESHSQNAANKPKKPLPMLIPLSPASNAKANNAGASGPGTTLLKVPRVRVRPELARIARDTEMARLYGNKEASELKKEAGTTDSFEKKNASFFDKLKERLMTTSGNNGIAEVAVSSQNDLKCWCTFEASSLEELTSHRRTHHTALSVSLGTSRCPNCRRRCKSSADLQVHMRLCHPTSNDYAATDNSLENSTGYTELRTAYRGEYAFPFQVDWDANFGALNSSGSSVEGGSTPSGRRVFKCPHCPFWASTASRFHVHIVGHLNRKPFECSLCAYRSNWRWDITKHIKLKAARDPAHMCARVLMTDETGRRNYSKYNKYLAQIEQQSGDERIYGERTGEDRTSDEPPTKVLIMSDTKEYPQPPELTPAPVSLLTSTNSAREISALPLRPPPPLKAATRSQGQSLLKNNPAVSNANATVTPTAGAAASSSTTAAVTALAITQATAMAPSRSSPPGSGSEESKRTLWKCKRCNFRDSNKETVLIHVKSHYESMDDVAESEKNAFTCEDCPFSAADAESLALHRVHHRPNLEAIFKCYLCPYYVSTKVELLDHARLHGEELAVVHQRNIESDSSPSERKYSQNHRTILTNSQTKEESSMEQVIHITSPSTSTSGSVSSKGNEAPPLLLDTRALPDAPLVWVSRTDGTIAKMLKCRHCPHVSSRRAEVRDHESMHMNSPNQGSLIACPSCSFACSRREVMDSHAEMHSGALGTVHCLVDEGRTDAQQLNDLSTLLGLPQPISVASEPDLRDSRLVHCCSKCPARFLCEKELRIHLRYHCTELAYSCQWCSYAARQPAHLLAHQKAHSPEYQDRTRYLLSLYGHSQRYPPPTTACVEANTQDSAEGNSANVAWIVVEVGTGRSNVLTNHLTTGSQETGNQVFTCAKCPARYFKLDALEYHMTLHGTNNRFKCTECDYSSKTAQNLVKHQVVHRRHAEANENVTSSRLLPPPDPQFGILMRGNPNFVYPGYLRNGRLREKRYKCHKCPSAFEKREQYRIHLTLHGAKQRYRCDTCDYSVKYYANYAQHLRKHQANAQAQASRRRYEDDAITIDAGIQSDSSISISRSGKSLTKSSAGSSAAGNILAGGSAANSAVLQVSNQDKQSLMLLQKKGLLVAPSEAEAENIRCQDCPFSTPDKDVMDAHKRRHGIERMTPPCPHCDYVPRKDENVGDHIRLHFTRLYKPDSYLIAELLTLTMRRVPGNSKEDAKENELLFKECADGRFLPIVDPSTSSRSLSPNGNSVQEKVIVDPNTGEAKQHLTV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01475809;
90% Identity: iTF_01475809;
80% Identity: -