Basic Information

Insect: Trachelus iudaicus
Gene Symbol: -
Assembly: GCA_030142595.1
Location: JARQTH010000477.1:74367-76786[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.012 0.84 10.2 1.0 1 23 236 258 236 258 0.97

2 7 7.2e-07 4.9e-05 23.5 1.6 2 23 386 407 385 407 0.97

3 7 1.2e-05 0.00079 19.8 0.8 1 23 413 435 413 435 0.98

4 7 5e-06 0.00034 20.9 1.7 1 23 441 464 441 464 0.93

5 7 8e-08 5.5e-06 26.6 0.7 1 23 470 492 470 492 0.99

6 7 9.3e-06 0.00064 20.0 4.9 1 23 498 520 498 520 0.99

7 7 2.2e-06 0.00015 22.0 3.2 1 23 526 548 526 548 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.012	0.84	10.2	1.0	1	23	236	258	236	258	0.97
2	7	7.2e-07	4.9e-05	23.5	1.6	2	23	386	407	385	407	0.97
3	7	1.2e-05	0.00079	19.8	0.8	1	23	413	435	413	435	0.98
4	7	5e-06	0.00034	20.9	1.7	1	23	441	464	441	464	0.93
5	7	8e-08	5.5e-06	26.6	0.7	1	23	470	492	470	492	0.99
6	7	9.3e-06	0.00064	20.0	4.9	1	23	498	520	498	520	0.99
7	7	2.2e-06	0.00015	22.0	3.2	1	23	526	548	526	548	0.97

Sequence Information

Coding Sequence: ATGGAAGTAACTACAGAAGATGCTGCACAAGCAGTCCTACTGGAAAGAATGGAAGGTACACAGTATATCACCATTCAAAGACAGGATGGTGAATCACTTGGAAAAGGAGTACCACTTCTTGCACTGAATGGTGAATTGATCCCTGAAGGAATGGTTGTGGATATGATCAATGCTGGAGTAGGATCTGAATATACCACAACTACTCAGTACTATGAAACAGAAGAAGACTTGCTACCTCATGAATTGACCGAGGATGATCGAAGATTGGCAGCAGCACTTGTCGCAGTTCAGTTGCAACAGCAACAGAAGCAGCAACAGCTGCACAGTCAGCAACAACATGAAGATCCTACTTTACCTGATGTCAGTCATTTAGAACCCCTGTCTCCTGTTAATGCCTACACTATTCAATCCATGCCTGATCCTGATCCTCCTTCGGTTTATCCCACGTTACAGCCCTTGAAGAGAATTTCACAAAACGTCAAGCAAGAGTTCATCAACATTAAGAGCGAATATGACGTTGATGTTTCTGCAGAAAGTAGTGAGGATGCTGCGCCAACTCCAGGACCTAAGAGATCATTACCCCACAAGAAAAGAATTCCTAGAAAGCTCAAGCAACaatcaaaaaagaattcaacAAGGAGAGATAATGCAAGATTAAATCAAGATATTTCAGTAGAAACCACTACAGAAGTTCAAGTTCATGCATTCAGATGCGAACTGTGTGGAAGTAGATTCAGTGGACAGCTCAAATTCTTTGAGCACCTTAAGgCTCACTACGAACCAGTCAAACAAGAAGCCAGAATAGCCCAAGCAACAAACACGAGTATCACTATGTCCGTCACTGAATCTGTACAAGGCTTAGACAATAGCGTAATTGAGGAATTTGATGAACCCGAAGATCTTATGGAAGGAATCAGAGGAGTGGTTGAAGAAATCGGAGCCCACATAGATGAGGATATTGAAACTCCGTTGGTTGACGTAAACAATGGACCACCGTTGTGGGCAATAGCAGATGTTTCAAAGCACACTGAACAAGAAGAGATCCAAGCTACAACCATAAATGAGGATGATTtacaagagaaggaagagactGATATTCCAGAGacagcaaagaaaaagaagttgcAAAAGAGTCGCAAGAACAACGATGAACTCGTTTGTCCTCAATGTGGACGATCTTTCaatcataaaaatagtttAGTTTATCATATGAGGTCCCACAGTGGAGAAAGACCACATCAGTGTGAAGTTTGCGGTAAAAGTTTCTTCGCTGCTAGTGCACTAAAGgttCATAAACGTCTTCATAGTGGCGATAAGCCATACAAATGCGAAGATTGCGGAAGACACTTTAGACAATGGGGtgatttgaaatatcattcaACTAGTATCCATTCAGAACAAAAGCAGTTTCAGTGCGAGTACTGTGGCAAAGATTTTGCACGAAAATATTCCCTGATCGTTCATAGAAGAATTCATACTGGTGAGAAAAATTATCGTTGCGAATTTTGTCACAAAACTTTCCGGGCGAGTAGCTACCTCCAAAATCATCGAAGAATACATACTGGAGAAAAGCCGCATCCTTGTACCGTATGCGGAAAACCATTTAGAGTACGGAGTGATATGAAAAGACATATGCATACTCATTCTCGAGGAAGACCTGCACGTCCTCCAAACAGAATTGTGGCAGGAAAGAGTTTGAATGAAGAGAGTGACAAGAATTCTCAAGCAAGAACCATTCAAAGCAATATAGTGCAGGATTTAAAACTTGAGGTTGAACCTGGTGGAGTAGTAGAGATCGGGCCTCCTGAAGATAATCCTGAGAGTATCTTACCGCATGAAGGTGGACAGACTTTGGAGTATACTGTAGCAACTAGCACAGATAATGGATCAGACAGAGATCCACTGGAAGCAGTTGTTAGGACAACGGATAACCTGCAGTacttctttatataa
Protein Sequence: MEVTTEDAAQAVLLERMEGTQYITIQRQDGESLGKGVPLLALNGELIPEGMVVDMINAGVGSEYTTTTQYYETEEDLLPHELTEDDRRLAAALVAVQLQQQQKQQQLHSQQQHEDPTLPDVSHLEPLSPVNAYTIQSMPDPDPPSVYPTLQPLKRISQNVKQEFINIKSEYDVDVSAESSEDAAPTPGPKRSLPHKKRIPRKLKQQSKKNSTRRDNARLNQDISVETTTEVQVHAFRCELCGSRFSGQLKFFEHLKAHYEPVKQEARIAQATNTSITMSVTESVQGLDNSVIEEFDEPEDLMEGIRGVVEEIGAHIDEDIETPLVDVNNGPPLWAIADVSKHTEQEEIQATTINEDDLQEKEETDIPETAKKKKLQKSRKNNDELVCPQCGRSFNHKNSLVYHMRSHSGERPHQCEVCGKSFFAASALKVHKRLHSGDKPYKCEDCGRHFRQWGDLKYHSTSIHSEQKQFQCEYCGKDFARKYSLIVHRRIHTGEKNYRCEFCHKTFRASSYLQNHRRIHTGEKPHPCTVCGKPFRVRSDMKRHMHTHSRGRPARPPNRIVAGKSLNEESDKNSQARTIQSNIVQDLKLEVEPGGVVEIGPPEDNPESILPHEGGQTLEYTVATSTDNGSDRDPLEAVVRTTDNLQYFFI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00060575;
90% Identity: iTF_00291769;
80% Identity: -