Basic Information

Insect: Trachelus iudaicus
Gene Symbol: ZNF341
Assembly: GCA_030142595.1
Location: JARQTH010000651.1:58503-61194[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.057 3.9 8.1 4.1 1 23 45 67 45 67 0.98

2 14 0.00089 0.061 13.8 6.1 1 23 225 247 225 247 0.98

3 14 2.1e-07 1.5e-05 25.2 0.4 1 23 253 275 253 275 0.98

4 14 0.0044 0.31 11.6 1.9 1 23 300 323 300 323 0.96

5 14 0.13 8.6 7.0 0.7 1 23 329 353 329 353 0.95

6 14 0.00013 0.0091 16.4 2.6 1 23 358 380 358 380 0.99

7 14 0.0033 0.22 12.0 3.9 1 23 392 416 392 416 0.91

8 14 0.00069 0.047 14.2 2.3 1 23 418 440 418 440 0.98

9 14 7.1e-06 0.00049 20.4 0.2 1 23 446 468 446 468 0.96

10 14 7e-05 0.0048 17.3 0.3 1 23 474 496 474 496 0.95

11 14 0.012 0.84 10.2 0.4 5 23 511 529 502 529 0.79

12 14 0.014 0.98 10.0 7.0 1 23 535 558 535 558 0.93

13 14 0.0019 0.13 12.8 0.5 2 19 561 578 560 581 0.94

14 14 9.8 6.7e+02 1.1 0.2 4 15 578 589 578 589 0.86

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.057	3.9	8.1	4.1	1	23	45	67	45	67	0.98
2	14	0.00089	0.061	13.8	6.1	1	23	225	247	225	247	0.98
3	14	2.1e-07	1.5e-05	25.2	0.4	1	23	253	275	253	275	0.98
4	14	0.0044	0.31	11.6	1.9	1	23	300	323	300	323	0.96
5	14	0.13	8.6	7.0	0.7	1	23	329	353	329	353	0.95
6	14	0.00013	0.0091	16.4	2.6	1	23	358	380	358	380	0.99
7	14	0.0033	0.22	12.0	3.9	1	23	392	416	392	416	0.91
8	14	0.00069	0.047	14.2	2.3	1	23	418	440	418	440	0.98
9	14	7.1e-06	0.00049	20.4	0.2	1	23	446	468	446	468	0.96
10	14	7e-05	0.0048	17.3	0.3	1	23	474	496	474	496	0.95
11	14	0.012	0.84	10.2	0.4	5	23	511	529	502	529	0.79
12	14	0.014	0.98	10.0	7.0	1	23	535	558	535	558	0.93
13	14	0.0019	0.13	12.8	0.5	2	19	561	578	560	581	0.94
14	14	9.8	6.7e+02	1.1	0.2	4	15	578	589	578	589	0.86

Sequence Information

Coding Sequence: atggcgcaATCTATCTTTGATGCTTTAACGGGTGTTTCCATCGACAGTCCATCAGTACAAGCATTATTAGATTCTCCGACTCTTATGTCAGAGGTTGAGCAATCTGCCATTGATCAAGAGGATGAAGATATATTTCAGTGTGGAAAATGTAAATCACAGTTCACTTCGCTGCATATGTTTATACTGCATAAAAGGGAGCATTCTAAAGTTCAAGAACATACAGTAGATCTGAGTCAGTACTTGGTTAGTAATGATAATCAGACAGTACACACTGACAATACTGGTCAAGATGGAACAGAGTACAATCCCCAAGACAATTTCGTTCAGGCTTCGCTTGGAGAGCCCATTATACTTGAAGAGACTGATATGTTATTTAGTATGGACCAAGAGGGTACCAATTACTTAGCATCAGACCCTGAATTTGGAGTACCAATTATTTTGAACACACAGAACGTTAGTACCTTTACAAATTCCATAATCAGCACTGAAAATGAGGTTGAAGAAGCAGATGGTCATTCTGCTCTACAAACTGATATATCCGAGGATAATTCTATGTCCTCGACACCTCAATGTCAAGGAAATTCAGTTCCCTTGATACCTCTCAATGTTACACACATTGAAAATCTGCCTACTGTACAAAGTAATGACACAAATCAAATTCAAGAATTAAGATTTAAATGCAGCTACTGCCATAAAcaatttccaaagaaattcTACTGGCAGCAACATGAACGTTCTCACACTGGCGAGAAGCCGTATCAGTGTGTAGTATGCGGACGTGCATTCGCACAAAAATCAAATGTTAAGAAGCATATGTCCTCGCACAAAGTCTGGCCTGGTACAGCCATACGTTCATTGCCACCAGAGGCACCAATGGATGGCAGTATAGATCGTACGTACCACTGTCAATTCTgcagagaaatattttccacgtACAAGGATCTTAAGGGCCATCTAATAGTATCTCATCTAGCtctaaaagtatataaatgcGTACAAACTAGCTGCAGCATGATGTTCTCCGAACTGGAGGAGTTTTTGGAACACACAAGAAGTCACAAACGATCAGAGTACCGTTGTCACATTTGCGCCGAAATCTTTAATACATTATCAGACCTAGGCCATCACCAGAAAAGCCACACCGTCCAAAAACAGAAATcgactgaaaaatattattgctgTTCAATCTGTAAATCATCTTTTTCGAATCTCGAAGCTCTGCAGCATCATACAGAAACTACTACTCATGATTATGCCTGTCCGCATTGCGACAAAAGTTTTCTCATTGAACGTTTCTTACGTCGCCATCTAAAAACTCATGCAACTTCTGCCAGATTTGCTTGCGAAGATTGTGGCAAAGCTTTTAAGACAGAACAGTATTTGGCAAACCATAAACTTATTCATAGCGAAGAGACACCATTCCTGTGTCCGAATTGTCCAGCacgttttaaaagaaaagaccgATTGGGACGTCACATGCTTATACACGATCTAACTAAAAGACTCAAGTGTCCCTTCAGAGGATATTTGGGATGCATGAGTGAATTCTCACGATCTGATAAGCTTAAAAGGCACCTTCTTACGCACAGTAATATCAAACGCTTCAGCTGCAGCCATTGCAATCGTAATTTTCACAGAGCACAGGCGCTCAAGCATCATGAGCTGAATAAGCATTGCGTCAAATGTGATATTTGTTCCCTCGCATTCAAAACTAAAGAACAATTATTAACTCACAATTGTGATCAAACATTCGAGACAAAAAAGCACAGCAGTTCTCAAAGACCAAAAAAAGCTTCTGGTACCTTCAAATCAAGGAAACCTACACCGAAGAGACAAATATCGACTAAGTCTCTTACGGAgtccgtcgaaaaaaaaatgaatgagtcAGAAGAAAAGTTAAATATAGAGGAAACTTCTGTAAAACTACGAAGTACATGCGTGACAAAGGAGATAGAATCTGTTATTCAAGTATCGTTAAAGTCTTCAGCAATGAGTAAGGATAAACAACGCAACATGGACAACCGTTCGAACAACATGAATTGTGATTAA
Protein Sequence: MAQSIFDALTGVSIDSPSVQALLDSPTLMSEVEQSAIDQEDEDIFQCGKCKSQFTSLHMFILHKREHSKVQEHTVDLSQYLVSNDNQTVHTDNTGQDGTEYNPQDNFVQASLGEPIILEETDMLFSMDQEGTNYLASDPEFGVPIILNTQNVSTFTNSIISTENEVEEADGHSALQTDISEDNSMSSTPQCQGNSVPLIPLNVTHIENLPTVQSNDTNQIQELRFKCSYCHKQFPKKFYWQQHERSHTGEKPYQCVVCGRAFAQKSNVKKHMSSHKVWPGTAIRSLPPEAPMDGSIDRTYHCQFCREIFSTYKDLKGHLIVSHLALKVYKCVQTSCSMMFSELEEFLEHTRSHKRSEYRCHICAEIFNTLSDLGHHQKSHTVQKQKSTEKYYCCSICKSSFSNLEALQHHTETTTHDYACPHCDKSFLIERFLRRHLKTHATSARFACEDCGKAFKTEQYLANHKLIHSEETPFLCPNCPARFKRKDRLGRHMLIHDLTKRLKCPFRGYLGCMSEFSRSDKLKRHLLTHSNIKRFSCSHCNRNFHRAQALKHHELNKHCVKCDICSLAFKTKEQLLTHNCDQTFETKKHSSSQRPKKASGTFKSRKPTPKRQISTKSLTESVEKKMNESEEKLNIEETSVKLRSTCVTKEIESVIQVSLKSSAMSKDKQRNMDNRSNNMNCD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01199620;
90% Identity: iTF_00296241;
80% Identity: -