Tiud008508.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Trachelus iudaicus
Gene Symbol
ZNF236
Assembly
GCA_030142595.1
Location
JARQTH010000423.1:22031-29731[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 24 7.5e-05 0.0051 17.2 1.0 2 23 53 74 53 74 0.98
2 24 6.8e-07 4.6e-05 23.6 1.3 1 23 95 117 95 117 0.99
3 24 2.4e-05 0.0016 18.8 0.7 1 20 123 142 123 145 0.94
4 24 0.00015 0.01 16.3 0.2 3 23 153 174 152 174 0.98
5 24 0.00035 0.024 15.1 3.8 1 23 183 206 183 206 0.98
6 24 2.6e-07 1.8e-05 24.9 2.8 1 23 324 346 324 346 0.99
7 24 0.00054 0.037 14.5 3.8 1 23 352 374 352 374 0.99
8 24 0.047 3.2 8.4 3.9 1 23 380 402 380 402 0.98
9 24 1.7e-05 0.0012 19.2 3.4 1 23 406 428 406 428 0.98
10 24 0.00036 0.025 15.1 3.6 1 23 483 505 483 505 0.98
11 24 4.7e-05 0.0032 17.8 5.0 1 23 511 533 511 533 0.99
12 24 3.3e-05 0.0023 18.3 2.4 1 23 539 561 539 561 0.97
13 24 0.00011 0.0076 16.7 7.2 1 23 567 589 567 589 0.98
14 24 1.3e-06 8.8e-05 22.8 4.1 1 23 911 933 911 933 0.99
15 24 0.058 4 8.1 0.8 2 23 957 978 956 978 0.97
16 24 8.5e-05 0.0058 17.0 2.9 1 23 984 1006 984 1006 0.99
17 24 1.1e-05 0.00076 19.8 3.5 2 23 1013 1034 1012 1034 0.97
18 24 5.7e-07 3.9e-05 23.9 1.6 2 23 1108 1129 1107 1129 0.98
19 24 0.034 2.3 8.8 5.2 1 23 1135 1157 1135 1157 0.96
20 24 0.00014 0.0098 16.3 1.6 1 23 1163 1185 1163 1185 0.98
21 24 0.0017 0.11 12.9 2.9 1 23 1191 1213 1191 1213 0.98
22 24 0.00036 0.025 15.1 1.2 2 23 1450 1471 1449 1471 0.97
23 24 2.6e-05 0.0018 18.6 4.0 1 23 1477 1499 1477 1499 0.98
24 24 1.8e-05 0.0013 19.1 6.6 1 23 1505 1528 1505 1528 0.96

Sequence Information

Coding Sequence
ATGTCACTCACCGTAGAGTGCCTCGATTTCGCACTTCTGGTTATCTGCACACGAGTTTTTCACTTTGCGCTAGGACTCAGCGCTGAATACTATAAGgcACAGCTTGATGCACATTTGAAACTTCACAATGAAAAGTGGTCAACCGAGGATGTGCGAAAATGCAAGCTttgcaataaacaatttacCCAGCCAGCCCTTTATCGACTTCACATACGAGAGCATTACAGATTGCAAACCAAAATAGTAAAACACACAAAAAGAGGCACGAAGCACAAAACTATGTATAAGTGCAAAATATGCCTAAAGTCTTTCCAAAAACCAAGCCAGCTCATGAGACACATTAGAGTGCATACTGGCGAAAAACCCTTTAAGTGTAATGTCTGTAGTCGAGCTTTCACACAGAAAGGATCTCTACAAATTCACATGTGGAAACATAACGGCATACGGCCCCATGGATGTACAATGTGCAGTGCCAAATTCAGTCAAAAGGGTAATCTGAATGCTCATATACTCAGAGTACACAGCGTGCCAGAAGGCGAACCAATTTATAAATGCACCTATTGTTCTTGCGTCTTCAAAAAACTGGGTAGCCTCAATGGACACATGAAAAGGATGCATTCAAATCCCGTGGAGGACAAAACGAGTGGCGACCATCCCACGGAAGCAGATATGCAAGCCACCGTGGATACTGTAATCTCACAGTTAGCCTCGTTGGAGTCTGGCATAAAGCATTCAATGAATCCGAATGACAACACAGCAGTCCAAACTTGTAAGAATGATATCCTTCAACAAGCACTGAAGAACAGCGGACTATctagtaaagagaaaaatttaaacaccAATGATGCATCAAGCTTGAAGAAAGTTGAGGCTGAGACTACTTTAGTGACTCTATTGGACAGAACTACTGATGGTTCCATGAGGAAGTATATCACAATTAAGCAACGGAGTATAGGAAGTATAAGATGGTACACGTGTTCCTACTGTCATAAAGAATTCAAGAAGCCATCTGATTTAATACGTCATTTACGGGTGCACACACAAGAAAAACCTTTTAAGTGTTCTCATTGTTTTCGCTCATTTGCTTTAAAGTCGACAATGATGGCACACGAACGTACTCATATGGGTGCAAAGAAGTACGAGTGCAACTCGTGcgataaattatttgcttGTCATAGCAGTTTCACAGCTCACATCAGattgcACGCCAAGTCTCATAGATGCACTATTTGTGATAAATTCTTCACCTCGAGTACAGTCTTGAGAAGTCATATGAAGATTCATACGCCAGAAAACTCCCAAATATCGGCCGAGGCGGAAGTTCTGGCGCCACAAATCGTCCTGGAGGAACCGCTTATTATTAGCGATGCCGGAAATAAAATCAGTGTTGCTCAGGTTCAATCGAAACaaagacaaatttataataatggtGATGTGGCAAGACCGCACAAGTGTTGGGTTTGTCCTGCGGCATTTAGAAAGATCAGTCACCTAAAACAGCACTATCGGAGACATACAGGAGAACGACCATACAAATGTCAAAAATGCGACAGGAGATTTACTTCGAATAGCGTATTGAAATCTCATTTACATACTCACGAAGACTCGAGACCTCATAGCTGCTCCATGTGTGGGGCAAAGTTTTCCACACAAAGTAGTATGAAGAGACACTTGGTGACACATAGCAACAAAAGACCATTTATGTGCCCTTACTGCCACAAAACTTTTAAAACATCTGTCAATTGCCGAaaacatatgaaaattcataaacacGAATTGGCACAACAgcaATTAGAGCAACAGAGAACACCACAGACATCGCAGCTCCCTCTGATAGAGGATAAACGTGAAATTACCTGTTTGTCTGATAATCTTGAATTGACTAATGAGATGGAAGTAACGTTTCAGCCGCAAATTACTCCGGATTTTACTCAGGCATTTTCGGATCAATTCCAAGGTATCGCTATGGACAAGGACAAAACATTCCTCTCTCAAAATGATACAACGCAACCGATAGTCAGTGAAAGTTTATCTAAAGCGGACACAGTCCCTTTAGGATCATCACAGACCTTGCATGCAGACGAAACTGGCACTATTACACTTCCTAACTATTCTGGCGATCAAACATTAACACCGGAAAGTATACGAGAAATTGAGGAAACATTAAATCAGCAGTTGTTTAATATAGGAATGAATTTAGGTTTAGAAAATAATCTAACGAGGCAGATTAACGAGGCCAGTGCGGTCTCTTTGGATATGAGGGAGCAAcctgtattaaatataatttacgacAATAACAAAGGCATAGAATCGTCAAATTCTAGTGCAATTACTGGAAATATGTTTCCCTCACAGTTCGATACCTTTGATATGAGTCATATTGCTTTGCAGgATGACACCGAACTAGATATAGGAATTAGTTCAGCGAATTCAACAAGTATGGCTAGTATTTTGCCACGCTCAGCACAAGAAGAACAACGTCTCGTACCAGCAAAGACAACAGTCAATATTGAAGATGGACAAACAAAAGCATCCAGACACCTCATGGTTATAAGTTCGACGCAATCTTGTCCAGAACTATCACGACCTGTTCAAGTTTGTCCAAAATACCCTAAAGTCATTGCAAAGGCTGACACGACGGATgaattggaaattcaaaatgtcgacaacgaagtaaaaaatcgagatgaaatgaaaatagttgACAATcatgatgaaaaaattgcgACGTTTACGTGTGATATATGCGATAAAATCTTCCATAAACAAAGTCAGCTAAAAACTCATATGAAGACTCATATATTACATGAAAGTGTCGATCAAAATAAAGACGACTTGATAATAGTTAGCGAAACAGATTCCCTCTTACAGTGTCATATGTGCAGTAAAAAGGGTTTCGCTGCAGCCGCATTGAAagAACACTTAAAAACTCATCGGGGCACGAAGGAATTCCAATGTACAGAATGTTCCTTAAGATTCTGTACAAACGGTGGACTGAGTAGACATCTAAAAATGCATGCAAGCAGACAacaATGGAAATGTACGGTTTGTaacaaaacattttcaagtaaaatacATCTGAAGTCCCACCGACAAATTCATGAAATCAGCTGGAATACGAATTCAGTAGAGCCTGATAGTTCGCAAAAAGAACCATTAGCGAGAAGCACGGATTTTCtgtcaaatattaatcataaCGTTACCACAGGAAACGATTCATCAGTTTCGCAAAAAGTCTTACTCGATACCGTAGCAGAAAAGGATATAATCGATCAttcaaatgaacaaaatgagaagaaagagaaacaagaatatACAAACAAGTGTAAATTCTGTCCGAAAACTTTTCGGAAACCAAGCGATCTAATAAGACATGTTCGTACGCATACCGGAGAACGACCGTATCAATGCGAATATTGTAACAAAAGTTTTGCAGTAAAATGTACATTGGACTGCCATTTGAAAGTGCATACAgggaaaaaaacattttcgtgTCACGTATGCAACAGTTTATTTGCAACTAAGGGCAGCCTTAAAGTCCATATGCGACTCCACACAgGTTCCAAGCCATTTAGGTGTCTACTGTGTGATCTACGATTCAGAACCTCGGGACACAGAAAAGTTCATCTACTGACCCATATGAGAGAACACAAAAGTGGGCCAAAGCGAAAACCAAAGCAGTCGAAGTTCAGCACTATCGCAGGTGTCGCTGCAGAATTGGAGAAGACAGTAGAAAGTGAAATAAACGACGAAACTACCATGATTAGTGAGGGTGCACAACCGACCGAGTATTCGAATCTCGATTCGATTACTATTGACACTTCAGAACTTACCGATCAAATTACGTTTAATGCCGATGGCACGATATTGAACAACAATTCCATGTTGTCAGTCAATGAAAGTAACCAATTAGTAGCCAATTTGCATTTCCTCCTTGCGAATGGTCTTGTAACTATTCAAACCGATGAGTCACTTTTACCGCATCTCCCAAACAGTGATACTCAGGTCATCCAAACTGAAACTAGCATCGCTGAACTCGTCACGTCTGAAGCGCTAGAACACATAACCTGCACCGACGCAAATTCTAACATCGGTATAACGACAGGACCGTGCAACGACCCTATTTTAGAGACTGTTTCTGAGACTATTTCTCAGAATTTATCCAAAGAAATTCCACAAACCATTAGTGATGTTTCTGAAGCGAAAAAATCAACGTTACACCTTGATCAGTGTACGAAGTTAATGCAGGTGGATAATGGAGATATGAACGAGAATATGGGATTGAATAAGGAGGAAAGCGTACAGAGTATTCCTAAACAAGGAGCACAGAGTAGTCAATCCCGCAAGGAGTGCGATATTTGTGGAAAGGCATTTATGAAACCGTGTCAGGTGGAGAGACACAAACGAATTCATACCGGCGAGAGACCTTATAAGTGTAATTTATGCACCAAGTCATTTGCCCAAAAAGCAACATTACAAATGCATCAGAAACATCACACTGGAGACAGGCCCCATCCTTGCCCCCATTGCGATTATTCTTTTACACAGAAATGCAATTTGCAAACTCATCTGAAGCGTGTTCACCAGTTGGACACCTTGGAGGTAAAGAAGTTACGACGCGGTCAACAGGTATTGAGCGCTAAGTCAATGCAAGATAATCTAGATGATACTAGAATACTCAGCTTGGATGATATTTCGTTTGTGGACTTTTTGAAGTAA
Protein Sequence
MSLTVECLDFALLVICTRVFHFALGLSAEYYKAQLDAHLKLHNEKWSTEDVRKCKLCNKQFTQPALYRLHIREHYRLQTKIVKHTKRGTKHKTMYKCKICLKSFQKPSQLMRHIRVHTGEKPFKCNVCSRAFTQKGSLQIHMWKHNGIRPHGCTMCSAKFSQKGNLNAHILRVHSVPEGEPIYKCTYCSCVFKKLGSLNGHMKRMHSNPVEDKTSGDHPTEADMQATVDTVISQLASLESGIKHSMNPNDNTAVQTCKNDILQQALKNSGLSSKEKNLNTNDASSLKKVEAETTLVTLLDRTTDGSMRKYITIKQRSIGSIRWYTCSYCHKEFKKPSDLIRHLRVHTQEKPFKCSHCFRSFALKSTMMAHERTHMGAKKYECNSCDKLFACHSSFTAHIRLHAKSHRCTICDKFFTSSTVLRSHMKIHTPENSQISAEAEVLAPQIVLEEPLIISDAGNKISVAQVQSKQRQIYNNGDVARPHKCWVCPAAFRKISHLKQHYRRHTGERPYKCQKCDRRFTSNSVLKSHLHTHEDSRPHSCSMCGAKFSTQSSMKRHLVTHSNKRPFMCPYCHKTFKTSVNCRKHMKIHKHELAQQQLEQQRTPQTSQLPLIEDKREITCLSDNLELTNEMEVTFQPQITPDFTQAFSDQFQGIAMDKDKTFLSQNDTTQPIVSESLSKADTVPLGSSQTLHADETGTITLPNYSGDQTLTPESIREIEETLNQQLFNIGMNLGLENNLTRQINEASAVSLDMREQPVLNIIYDNNKGIESSNSSAITGNMFPSQFDTFDMSHIALQDDTELDIGISSANSTSMASILPRSAQEEQRLVPAKTTVNIEDGQTKASRHLMVISSTQSCPELSRPVQVCPKYPKVIAKADTTDELEIQNVDNEVKNRDEMKIVDNHDEKIATFTCDICDKIFHKQSQLKTHMKTHILHESVDQNKDDLIIVSETDSLLQCHMCSKKGFAAAALKEHLKTHRGTKEFQCTECSLRFCTNGGLSRHLKMHASRQQWKCTVCNKTFSSKIHLKSHRQIHEISWNTNSVEPDSSQKEPLARSTDFLSNINHNVTTGNDSSVSQKVLLDTVAEKDIIDHSNEQNEKKEKQEYTNKCKFCPKTFRKPSDLIRHVRTHTGERPYQCEYCNKSFAVKCTLDCHLKVHTGKKTFSCHVCNSLFATKGSLKVHMRLHTGSKPFRCLLCDLRFRTSGHRKVHLLTHMREHKSGPKRKPKQSKFSTIAGVAAELEKTVESEINDETTMISEGAQPTEYSNLDSITIDTSELTDQITFNADGTILNNNSMLSVNESNQLVANLHFLLANGLVTIQTDESLLPHLPNSDTQVIQTETSIAELVTSEALEHITCTDANSNIGITTGPCNDPILETVSETISQNLSKEIPQTISDVSEAKKSTLHLDQCTKLMQVDNGDMNENMGLNKEESVQSIPKQGAQSSQSRKECDICGKAFMKPCQVERHKRIHTGERPYKCNLCTKSFAQKATLQMHQKHHTGDRPHPCPHCDYSFTQKCNLQTHLKRVHQLDTLEVKKLRRGQQVLSAKSMQDNLDDTRILSLDDISFVDFLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01395274;
90% Identity
iTF_00293894;
80% Identity
-