Basic Information

Insect: Trabutina mannipara
Gene Symbol: -
Assembly: GCA_900080175.1
Location: FKYK01016208.1:8078-12645[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.0064 0.53 10.9 5.6 1 23 354 376 354 376 0.98

2 18 0.00034 0.028 14.9 2.3 1 23 381 403 381 403 0.98

3 18 0.0049 0.41 11.2 1.0 2 21 414 433 413 434 0.93

4 18 0.011 0.92 10.1 1.0 1 23 439 462 439 462 0.97

5 18 0.18 15 6.4 0.1 2 23 502 522 501 522 0.79

6 18 3.8e-07 3.2e-05 24.2 0.9 1 21 528 548 528 549 0.95

7 18 0.0002 0.017 15.6 0.6 1 23 556 578 556 578 0.98

8 18 0.00012 0.01 16.3 0.3 1 23 588 611 588 611 0.98

9 18 0.033 2.7 8.6 0.7 2 23 620 642 619 642 0.90

10 18 0.00011 0.0094 16.4 1.0 1 23 650 673 650 673 0.98

11 18 0.0012 0.1 13.2 0.1 2 23 705 727 704 727 0.94

12 18 0.0042 0.35 11.5 0.1 1 19 757 775 757 777 0.93

13 18 1.6e-06 0.00013 22.2 1.3 1 23 787 809 787 809 0.98

14 18 3.4e-05 0.0029 18.0 0.4 1 20 818 837 818 839 0.96

15 18 0.0025 0.21 12.2 2.1 1 20 909 928 909 929 0.96

16 18 6.8e-05 0.0057 17.1 4.0 1 23 937 960 937 960 0.97

17 18 0.0031 0.26 11.9 1.7 1 23 965 987 965 987 0.95

18 18 0.33 28 5.5 1.0 5 21 996 1012 995 1013 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.0064	0.53	10.9	5.6	1	23	354	376	354	376	0.98
2	18	0.00034	0.028	14.9	2.3	1	23	381	403	381	403	0.98
3	18	0.0049	0.41	11.2	1.0	2	21	414	433	413	434	0.93
4	18	0.011	0.92	10.1	1.0	1	23	439	462	439	462	0.97
5	18	0.18	15	6.4	0.1	2	23	502	522	501	522	0.79
6	18	3.8e-07	3.2e-05	24.2	0.9	1	21	528	548	528	549	0.95
7	18	0.0002	0.017	15.6	0.6	1	23	556	578	556	578	0.98
8	18	0.00012	0.01	16.3	0.3	1	23	588	611	588	611	0.98
9	18	0.033	2.7	8.6	0.7	2	23	620	642	619	642	0.90
10	18	0.00011	0.0094	16.4	1.0	1	23	650	673	650	673	0.98
11	18	0.0012	0.1	13.2	0.1	2	23	705	727	704	727	0.94
12	18	0.0042	0.35	11.5	0.1	1	19	757	775	757	777	0.93
13	18	1.6e-06	0.00013	22.2	1.3	1	23	787	809	787	809	0.98
14	18	3.4e-05	0.0029	18.0	0.4	1	20	818	837	818	839	0.96
15	18	0.0025	0.21	12.2	2.1	1	20	909	928	909	929	0.96
16	18	6.8e-05	0.0057	17.1	4.0	1	23	937	960	937	960	0.97
17	18	0.0031	0.26	11.9	1.7	1	23	965	987	965	987	0.95
18	18	0.33	28	5.5	1.0	5	21	996	1012	995	1013	0.92

Sequence Information

Coding Sequence: ATGACTTCTGTGGACTCAATTCTATCCCAAGAACATGACTTAAGTAAACTAGAATATCTTTGCCGGCTGTGTGGATACTTGAACGAACCTTGTGCGCTCATTTTTGACGACATTCATCAACAGAATTTTGACGACATTATTAATATCTATTTTAAGGATGAATTTCAAGTCTGCCGGGATGATGTTCTGCCTCtgaaaatatgtcaaaattgTTTAACGTCTGTGGAATCATGGAACCAGTTTTATATCAATTGTGTCTgtgttaatgaaaaattttctcaaatagttgagaaattcaacttgaagAAAGAAGTTGATAAAAAACCAAATGATGTGATTAGTAACGATATTGAAGTAATTGAAGTTAGTGTGGAGgatgaaaattacgattttttcaacgatcaaGTAAATGCCAACCAGTTCGATATTTCAAACGTGAAGTTCACGCATTCTTCTCGCGCTGCTGGTAATATTCAAAGTTTCGACAATGTAGAAGATGTAACCCTTACCGATGATGCCGATGCTCAGAATGGCAATAATCAGTTATCAACGAATCTAACAGAACCTAAATCTAATTTCGGTCaagtcgtaaaattaattcatagtGAACTTAGTTGGAGGGTTGGGAGAAATCAAAACTTAATGAAACGATCAACATTGAACGACATTAGCGTTGACGAAGCCGACAACATCGATTCAGATGGCGCGGAACATGATAAAATATTGCCTCCGGCGCCGGCCACCGCTGACGTACTCGCCGAGTTACAAACTGCTGAAGAGAATCACGGTAGTGCCGAGCTAGATCTTAGGTGCGCTATGTGTTTAAATATCGCCTTTAACGGTCGAATAATCGGCGATCAGTACGTTTGCGAATTTTGTTGCAAAGTGAAGCTCGAATCGAACGACGATGAGCAGTGGAATTACAACGACGATTCGACTACAGTCACCAGTGGTGATCAATTCGATTACACTATCGCGTCTCATCAGTTATCCGAAAAAATAACGGCCATCGAGGGCGACAATGATTTGGCGGCCATGAAAACTCTGCCCGACGAAAAATACCAGTGCGCGCTTTGCCACAAAGTATACTGCAAGAAGAAGAGTATGATAAATCACGTGAAAAACcacaataaaaaagtattcccTTGTAATGTGTGCAACAGTAATTTTCGCACGTTTGCGCAATTGAAAACGCATAGGAAACGACACGTACGTAAATTGTTGAATAATACTTTGATATATTGCgaagtttgtaaaaagtatttcaaaaccAAGAAAGGGTTCGCTTatcatcaacaaaaaatctgtatCCAATATAAATGTTACATTTGCGACGAAAAGTTCTTAGTGCATTCCGTGCTAATGGATCATATGCGTAACGTACACGACGACGCCAAGAAAACAGCGTCCAGCAGCACTACATTAACTAATGACGCCGATGCGATCGGTTTAGCGATGGCTATGCCTTCGACTCCGGCCAACGATAACGAAACCGTCATGAGCGTTTGTCCAATTTGCCATAAGGTGGTTACGCAGGCTGTGCTGCCACGGCATATGATATTGCACTCGGAAGATAAACCTTTCACGTGCGACATGTGcggaaaatcgtttaaaagaAAGCACTCGCTTCAGGATCACATTATGATCGAGATGGGTATGAAGAATTACGTTTGTGATATCTGCGGCATGAAGTTTCTCAAGCAAGGTTACCTCAACAAGCATGTACGGTACCACCAGCTGAATAACGGCGAATACCAAGGGTTCCGTTGCGAAATGTGTGGCAAGAAGTTTCCTGAGAAGTGGCGTTTAGGCGTGCATCAGCGATCGGTGCACAAAGGTGGTCGATTTTCGTCCTGCAAGTGCGACATCTGCGGTAATATGTTCGCCGAAAGATGGATGGTACGGAGACATAAGGCGCAAGAACACAACGGCGAAGAATTCAAAGAGTACCAATGCGACGTTTGcggtaaaaaattccaagaaaaatgGATGATCAGGTCTCATCAAAGGAGCACCCATAAAAGcggcgttaaaaaaatgtactgcGAACTGTGCGGTCGTAGCGATCATCTGCAGAAAGACTGCACCCATAGGCACGCCATTCAAGAAGTCACTTGCGAATTGTGTGGCGAAGTATTTCAGTCGAATTTCGCTCTTAAAGAGCACGTAACGTCGGCGCATAATTTCGATCACATCGTTAATAATAAATGCAATCCTTTGGAAGAACCTCCTTCGACAGAAGAGcacaatttgaataaaaaagtactccATATATGCGCGGGGTGCGGTAGGCAATTCCCCGACAAGCTGCAACTCAGACAACACGAAATCGCCGCCAACTGCGtccaagaaaataaatacgagtGCGTAGAATGCGGCAAGGTATTCCACTCCAAGTCTAGCCTTAGTAACCATCTGATGAGCCACAAGAAGGCCAACATACCGACCATGTTCAAGTGTGAATTCTGCAGCAAAGAGTTCAGAAACAGCGAAGCACTCAACAGTCACATGTCCGGCGATAAGTTATGCCTTCTGTGCGGCAATGTATACCCTTGCGACGACCAACTACGCAATCACGTATATAAAGTgcacgacgacgaagacgacgattGCCATCCGCCGGTCAAAAGAGCACGATCTTCGGTCGCACGACAAAACGATGATTGGTCGCAGGATGAGGCTGAAACGGGTAGCGTGTCGACCGCAGTACTGTCCGATAAACCGTTCGAGTGTCGGTTatgtcacaaaaaatttgccCGCAAACAAgcgatgaaaaatcatctaTACGCTGAGCTGAACTTAAGAAGGCACGAGTGCGAATTTTGCGATAAAAGTTATAATTACTATTCGCACTTGAAGGAGCATATTATCACGAATCATGGAGAAAAAGAGTACGCTTGCGTTCATTGCGGAAAAGACTTCCCAACGAGGAAGCGATTCAGAGATCACGTGACGTTACACTTAGAGGATAAACCATTCCTCTGTGTGTGCGGATTATCATTTAAACTCAATAGATATCTGAGtaaacataagaaaaaatgtaaagttacagtaaaaaaagaaatcgaatag
Protein Sequence: MTSVDSILSQEHDLSKLEYLCRLCGYLNEPCALIFDDIHQQNFDDIINIYFKDEFQVCRDDVLPLKICQNCLTSVESWNQFYINCVCVNEKFSQIVEKFNLKKEVDKKPNDVISNDIEVIEVSVEDENYDFFNDQVNANQFDISNVKFTHSSRAAGNIQSFDNVEDVTLTDDADAQNGNNQLSTNLTEPKSNFGQVVKLIHSELSWRVGRNQNLMKRSTLNDISVDEADNIDSDGAEHDKILPPAPATADVLAELQTAEENHGSAELDLRCAMCLNIAFNGRIIGDQYVCEFCCKVKLESNDDEQWNYNDDSTTVTSGDQFDYTIASHQLSEKITAIEGDNDLAAMKTLPDEKYQCALCHKVYCKKKSMINHVKNHNKKVFPCNVCNSNFRTFAQLKTHRKRHVRKLLNNTLIYCEVCKKYFKTKKGFAYHQQKICIQYKCYICDEKFLVHSVLMDHMRNVHDDAKKTASSSTTLTNDADAIGLAMAMPSTPANDNETVMSVCPICHKVVTQAVLPRHMILHSEDKPFTCDMCGKSFKRKHSLQDHIMIEMGMKNYVCDICGMKFLKQGYLNKHVRYHQLNNGEYQGFRCEMCGKKFPEKWRLGVHQRSVHKGGRFSSCKCDICGNMFAERWMVRRHKAQEHNGEEFKEYQCDVCGKKFQEKWMIRSHQRSTHKSGVKKMYCELCGRSDHLQKDCTHRHAIQEVTCELCGEVFQSNFALKEHVTSAHNFDHIVNNKCNPLEEPPSTEEHNLNKKVLHICAGCGRQFPDKLQLRQHEIAANCVQENKYECVECGKVFHSKSSLSNHLMSHKKANIPTMFKCEFCSKEFRNSEALNSHMSGDKLCLLCGNVYPCDDQLRNHVYKVHDDEDDDCHPPVKRARSSVARQNDDWSQDEAETGSVSTAVLSDKPFECRLCHKKFARKQAMKNHLYAELNLRRHECEFCDKSYNYYSHLKEHIITNHGEKEYACVHCGKDFPTRKRFRDHVTLHLEDKPFLCVCGLSFKLNRYLSKHKKKCKVTVKKEIE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -