Tman010121.1
Basic Information
- Insect
- Trabutina mannipara
- Gene Symbol
- -
- Assembly
- GCA_900080175.1
- Location
- FKYK01007438.1:722-7795[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 32 7.2e-05 0.006 17.0 5.7 1 23 86 108 86 108 0.98 2 32 0.064 5.3 7.7 5.6 1 23 196 218 196 218 0.95 3 32 0.0012 0.1 13.2 1.8 1 23 255 277 255 277 0.99 4 32 0.00046 0.038 14.5 1.1 1 23 328 350 328 350 0.93 5 32 0.1 8.3 7.1 8.8 1 23 395 418 395 418 0.94 6 32 0.0096 0.8 10.3 0.1 1 23 474 496 474 496 0.96 7 32 8e-05 0.0067 16.9 1.8 2 23 517 538 516 538 0.94 8 32 0.043 3.6 8.3 0.3 2 23 789 811 788 811 0.95 9 32 0.00035 0.029 14.9 1.7 2 23 909 930 908 930 0.97 10 32 0.0035 0.29 11.7 0.7 6 23 954 971 954 971 0.99 11 32 5.8e-05 0.0049 17.3 4.8 1 23 1034 1056 1034 1056 0.98 12 32 0.0019 0.16 12.6 4.3 1 23 1070 1092 1070 1092 0.95 13 32 0.084 7 7.4 0.5 1 23 1116 1139 1116 1139 0.81 14 32 0.00038 0.032 14.7 0.5 1 23 1149 1171 1149 1171 0.97 15 32 1.1e-05 0.00091 19.6 4.2 1 23 1188 1211 1188 1211 0.95 16 32 7.2 6e+02 1.3 3.1 2 14 1222 1234 1221 1237 0.86 17 32 2.6e-05 0.0022 18.4 1.0 1 23 1251 1273 1251 1273 0.98 18 32 0.021 1.8 9.2 0.9 1 23 1276 1299 1276 1299 0.94 19 32 7.8e-06 0.00065 20.1 0.6 1 23 1315 1337 1315 1337 0.96 20 32 0.00079 0.066 13.7 1.0 1 23 1355 1377 1355 1377 0.92 21 32 0.025 2.1 9.0 1.4 1 23 1384 1406 1384 1406 0.94 22 32 2.6e-05 0.0022 18.4 0.3 1 23 1443 1465 1443 1465 0.98 23 32 0.016 1.3 9.7 0.5 2 23 1475 1498 1474 1498 0.95 24 32 7.1 5.9e+02 1.3 2.0 1 10 1507 1516 1507 1516 0.95 25 32 0.038 3.2 8.4 0.1 2 23 1691 1713 1691 1713 0.92 26 32 0.0039 0.32 11.6 0.1 2 23 1743 1765 1742 1765 0.94 27 32 0.11 8.8 7.0 1.6 2 23 1964 1985 1963 1985 0.95 28 32 0.00055 0.046 14.2 0.4 2 20 2028 2046 2027 2050 0.90 29 32 0.00011 0.0089 16.5 2.9 1 23 2060 2082 2060 2082 0.99 30 32 0.0012 0.1 13.1 1.5 1 23 2099 2121 2099 2121 0.98 31 32 0.00035 0.029 14.8 6.6 1 23 2193 2215 2193 2215 0.98 32 32 3.6e-06 0.0003 21.1 0.4 1 23 2256 2278 2256 2278 0.98
Sequence Information
- Coding Sequence
- ATGGAAATAGACACTTCACTTCTAAACGAGACTGCATCGCGAAGTACCGAAAGCACCGAAGTCGTTTCAAAAGACATCATCGACGACGTTGGTTCACAGTCAGGTTCTACGGAAAATGCAATCGAACCGAATACCAATCATACTGCAAAAGACACCACCGACGACGCCAGTTCTCAATCGAACTCAATAGAAAGCGCGATCGTACGGAGTGCTAATGATAGTTCAAAACCCGCAAACGAGGTTACCGATAAACCTTACAAGTGTCACATCTGCGGCAAATTGTTCTCACGTAATAGTAGTCTCAAGTGTCACATTAGATTACATGTCGAAGGTCCCGATAGTCTACTGCGCGGTTCGTCGGAGCCATCGGATAGCAGTCTAAAATCTCATATCGTCGAATTAAATcctaaaaaagaagaagttgTCGAGCCAGTCGTCGAGCCTTCTACCGATGAAAATACTACAGCTATAGTTCCTGCCGACGAAAACACTATAGCTATAGTTCCTGCCGACGAAGCCGCCTCCAGCGCACTGAATAGCTCACGCGATTCTTGTGACTTGACCGAAGACGAAGACAAACGCGACTATAAATGTATCATTTGCGAGAAAACGTTCTCTCGTAGAAGTAGCTTGACGTGTCACTATAAATTTCATCCGAAATCGCCTATATCCAAGAGTCAAGATGATATCCCCGTTAAAACAATCATTGACGAGACAGCAATGGAAATTGATCGAGATGATGATGCTGCTAATAAAGACCAatataaatgtgaaaaatgcgATCGTacgtttttgcaaaaaaatacgtacgctTGGCATTTGAAAATGCACGAGACAAATGTTCGTAAGAGATCGATTGACAATACCTCGAGTGTAAATCTAACCAACGGCGTTAACGACGTCGAAATGATTGATATTACAAGCGACGTCGACGTAGCAAAAAATAACACCACAGAACCGCAAGCAGTGGACgttaatatttacaaatgtCATCTCTGTCCCAGATCCTTCCCGCAGCTAAGAGGGTTGAAAACGCATTCAGGTGTACATAAAAGAAACCGAGTTGACGAACAATACAAGGGTccggaaattttaaatacaatcgTGTACGAAGAGGTTTCCAGTCGTAAATACACGTgttgttcgaaaaatcataatcACGACGACGAAGTGACCAAATTGTATAAATGCAACGTTTGCTGTAAATGTTTCTGCGATATGGATAACCTGAAAGCGCATCTCGCTCATAACCATCAAAAAGAAGACACGAGCGAGACTTCAAACAGACGTCACGTCGTCGAATCACCAAATAACACCGTTGTTGCGATCGACGACTCCGGTACTTCGCATGAGCAAGCCATCTCTTGCGTCAACGAAGACATCAAAGAACAAAAGATGTCGATTTCTATTCGCGGATTGTACAAATGCGGCGTTTGTAACAAAACGTTCGACGAAATACAATTACTTGGAGAACACGTCAACGTACACATTCAAGTTCACAACGAATCGCTGCTCAACAGCACCGACGATTCGGCAACCGAAGAATTATGCTGCGTGGGATGCGAGAAAACTTTCCGCAGCCAGAATGCGTTGAGTAGACATATGAACGAGCACCGCCGTCGTGAAGAAGAAATTCTCGTTCGGGTTACTTCATCGGGACGTAAAATACGCGAACGTAGATCGAGTGAAGATCTGAGCTCGAGTAGTCCTATCAAATGTCTGCCTtgtaatcgaattttcgaaagtatGCGAGCGAAACGTATCCACGACTTTTCTAAACACCCCATCGAACAGTCCGAGAACGAAGAACCAGAACCAGCACCATCCACCGAAACCGACGCCGATTGCGACGAACCCCGCAAAGAATTCGTTTGCAAATGTTGTAATCGACAGTGGATCAGTGCCAAAGCCTTAAATCGTCACAAAGGTTGGTGGAGTAAACAATTCCACGACTCTTCTAAACACCCTGTCGAACAATCCGAGAACGACGAACCGGAGCCAGCCAACGAAGAGCAACTCGTTTGCGAGTGTTGCAATCGACAGTGGGCCAGTACCCAAGCTTTAAATCGACATAAAGGTTGGAATAAACGTAGATTATCGGTGGCCGCCGGCGGAACTCAGCTCACAGAACCACCAACGACTGAAGAAGCTGCTTTTCCAGAACCCGATTTGATCCCCATCGACGAAAGTGACGTATCGAGCTCGGTCAAGTGTGGCTGTTGTAACGAACTTTTCCCCAATATTCCTGCTCTGAACGCTCACCTTTCCGGTCAGACTAGCGGTGCGGCAGCCGAAACAGCGACCTCTTCGCCGAATCACGAGAAAAACGATATGGTGAACTGCGACAGTTTGCGCGATCTCATCAAATGCGACCGATGCGATAAATTCTGTCCGAGTATTCCCGCTTTGAAACTACATATTATTTCCGACCATACGAAGAAATCTGCGGCACAAAGTTCAACCAAAGAACCAAGCACTCCGAAAAGAAACGTTGAAAGTACCGTCACGACTGACACTCTTAAGAAACTTTctatcgaaaacgaaaaaccgACCGAATCAGTCGTCGAGCCACCTAACGAAATTCAATCCCAAACGAACGAAGATGCCGTCGAAAAACTGGACATTATTCATTCGAGACCGAAACGAAGTAGGAAATCGGCTGATGAAACTATTATGAATCAAGTACTTACTCTACAAGACGATGCATCTAAACATAATCTGCAGCAATGTGACTTATGCGACGAAACTTTTACGTCGAAACGAGCTTTTAACAGTCATAAATCGACTCACGTCATCGACAACGCTGACAAACCGGAAGAACGAGCAGATGTTACTTCGGAAGCCGAAACGTTCGCTTGCTGCGATAAAACATTCAACAGCTCTAGAGCTTTGAAGGTTCATCAGAGTCGTCATACGGTCATCGCGACGGTAGACATCGCCCCAGCTGCCCATCAACAGCCACCAAAGCAACAAAAATCAGGAACGAAgtctaaaaaattcgacaatatGGAGTCTAACGAAGACACAGACGACGCTACCGATTCACTCGTAAAACACCAAGCAACCGATACCGAATCAGAGGAGGATGTGTTTGTAGAGTACAAGTGCTCAATTTGCGATAAACAATTCGTCTCGAGAAAAACTTTGAGGCACCATcgagaaaaacatttcaaaccgGGCGAACTCGATCCGGAATTCAGCGGAGAGTTTTCGTGTGAAAAATGTCACAAAAGATTCGATAGAAGGACTTCGTTGAGCGTCCACAAGGCGTATCACACTCTTTTAGAGAAGAACGCGAAAGCGCCAATAGATTACGGATCGTATTCGGACATGCGAAATGGCGTTTTCAAATGTAACGAATGCGACAGAGAATTCGATACTGTCAAAGGAGCGTCTACGCATTTTGCGAAAGCTCATAAAGAACCGGAGCCGGAGCCCGATGAGTACGCGTGTGCGATGTGCGACCGATCATTCAGCAGCCATCAAGGTTTGGCTGGACATATGTCGCGTCATAAGGGCGAAGCATCGACGTCGCGCCATGTACAACAAGAAATCGAAGATTTTACGTGCGCGCATTGCGACAAATCGTTTTCAAATAGTACTAGCCTGAAGAAACACCGCACAATTTATCACGATAATTTGACCAAGACCGATCCGGAATGTATTTGCGAAATTTGCAAGAAACCGTTCTGCGAACCTTCATCCCAAAACGAAAGCGAAGAAGAGGACGAAGAAAACACAGAAAGTGAATACCCGTGCACGTACTGCgatcgaaaattcaacaattatcGTGGTTTAAACGGGCACATGCAAATGCACCAAGTTTATCTGTGTTCGAATTGCGACCAAGAATTCATTACGTTTCGAAGTTACAAGCTACACATCGAGTCGCAACACCCCGATGAGGACGCTGCAGAAATGAACGCTGACCCGGTGAAAGAGTACGCTTGTGATAAATGCGATAAATCTTTTTCGTCAGCCAAATCGTTACGCAGTCACAAAGCTGTCCATAGTAACGCCGCAGCCGAAGAGTCTGAACCTGAGCCTGAGCCAGAAAATACGTTCAAATGCGATAAATGCGATCGATCGTTTAAATCGGCCAAATCATTAGGCGGTCATAAATCTGCGCATAGTAACGCCGTCAGCGAATTTAAATGCCAAAAATGCGATAAAACGTTCTTAACGGCCAAATCATTAGGCGGTCATAAATCTATGCATACCAAAAAAGAGGACGAATTCGATTCAGAGAACGACGAAAGCGAATCCGAACCTGACAACGAATCGGCCGCTGAAGATGCCGATAATGAGGAAGAACAGTCGAACGATTTCCCATGTCCCAGATGCGATCGTTCCTTCAACAACATCAGATCTTTGAACGTGCACGTCAATACTCACATCACCCAAGATAATCCGCTAGATTTGACGTGTCCGCAGCCGCAGTGCAATCGAGGCTTCGTCAGTCATCGGGCATTGAGCGCCCATTTTTTGACTCACAAACGCGAAACCAATATGCAAGACTTCGAATGCCCGAAATGCAAAGAAACGTTTCTTGTTATGAAAGCGATGTACGATCATTTCTACGCCAAACATAAAAGAGCCAAGAGAGTGGAGCGAGTCAGCCATCGCAGTTTGACCGTCGCCTCGAACGAGACGGAAATACGTACCGTATCGAGTCGCAGCCGTTCCCAAGCTTCCGCTCCGGTTACAGCGGAAGCTCGTAAAATGAGAAGTAAATCTGCCGGCGATTGCGCGCGTTTTCGAGATGAAAACCCGGTGAAATCTGCTCGCAGCAGCGAATGCGTGAATAAGGAAAACGTCCACAATTCGCCGGCATCCACTTCCGGCCTTAGGAAAAGTCGTCGCTTGAGGTCGACCGTTGAAACTACGTCGTCGGCGAAATGGTCCGCGGAAATGACGTCGATATCGGAGCAAACGGAAAATCAACCGATGGACGTGGATACGCGGACGGAGGATGAAAACGACGATAAAGCTGCGAAAGACAATATGCAATTATCTTGCGTATTTAACGATTGCGCACGCGATTTCTTCAACGGTACCGAATCCAAACCGAAATGCGACATATGTTCTTTGATTTTCGGCGACCTCAAAAGCTTAGCTAAACATTTGGCCGACTCGCACGAATCGACAAACTCGATCGACAAAAAGCACTCGTTGAGCCATTCCGAACCTTTGGCGTTGCCTTGGGAACCGCCATCGTTGAAACTAAAGTGTCCTCTATGTCCGAAAATTCTATCTACTGCCATCGGCCTGAAACGTCATTCGATGAGTGTGCATAAGATCACGACCCAACCACAAGTCAGCGCTACCGCTATTCCGTTGCCCAGTTCGGAAGTCGGCGTTCAACTTGAAGCGACTCGAGTCTCCGGCACTGAACAACCGTCGACCGAGCAATGCGTAGAAGAAACCGTAAAATTGACGACAAACGTCGGTCGCAGCTCTGTTAAGGAATCTATCGAAGAAAGCGAATCTTCGACATTCGGCGTAAGTCAAACCGTACCCAAGCCAATGGTCAATGAAAACGAATCTTCAAACGCGAACGTAGACGAAACCTCAGCCAAGCCATCGGTCAACTTGACCGAACGCTCGCCATCCGACGTCGATCTAACCCTATCCGAGGAATCGCTCGACGAAACCGAACACTCTAAATTGAACATCGACCAAACCTTATCCGAGCAATCCGACAAAGCAATCGAATGGAATCCTTCATCGACTCAAACCGACGACCAGATTGTACTTACTGTGGGGAACTCCACCGATCGAGAAGACGAACCACTGAAAGATACTATCCAACACGGTGAGTTAACGggcaacgacgacgacgtaaaCCCACCGCAGCCTTCGAAGTGCGCCGGCGCTGACGACCGTCTCAGTTGTAAAATCTGTTTACGCCAATTCGACCACGTCAAAGCCTTCAACAAACACGTACAGTGGCATAAATTCAACGACCAAGCTGTCGACGTCGAAGAGTCGGTCGTAAACGAAGACTCCACGAAGCAACGTCGCAATTCGAACGGCGTCCTCACCAACGGAATGGCCAGTCTCGAAGTATTGGCTTATGTGAAATGCGACATTTGCGCGAAAACTTTCACAAAAGCCGATACGTTGAAGAAACACGCCTTCGACGCGCACAGCGTGGTAATTACGTCTCCGCTCTTGTACCAGTGTAATTATTGCCATAAACCGTTCCCGCGAGGCAGAACGTTATTCTTACATTTGCAAACGCACGGAAACGCTCACTCGGCCAGCTCTACTCCTACCGAAGATATTATGCCGTTCGAATGCGCCTCTTGCGAAAAATGTTTCCGCCTTAAAGATGACCTGTTAGAACATGTGAAATCGCACATGCCCGACGCTGGAACCTCTCCACCCACCGAATCTCCAATTAACGGTTCAATAGAAGAATCGCGCGAGATAAACGGAAACGCAGACAGCGATTTTGAACAcgacgaaaatttcgaattgaaaatccaCACAGAGGAAGACGAACAAATTGACGACGTCGAAGAGACTAACAACGATGACCAGTCGCAACCTCGACCAGATTCTAAAGCTATCCACAAATGTCCTCATTGCGATAAAAAATACCCCAAAAAGTGTTACCTAGCCACACATATTCGTATTCACATTAAAAAAGACGATATtgctaataaaaaagaagaaccaAAACTTCAACCGATGATGAGAAGAAGAAGTATTAAATTGTCCGATGATACACAGTTGCCAATCGCATCACCGCCAAAACCGTACCAATGCCCACTTTGTGATAAATCCTTCCGTTCGAAATCTGTTCTAGCAGTCCACGAGCAAAAACATTCGAGCGCCAAATTAGTATTACGTAAATCGCTGAAACGTGTCAACGAAGGTGACGACTTTACCACCGAAGACGGCGTAAAAAGTAGCAAGAGAGCCTCGAAAGATGTATCGTGA
- Protein Sequence
- MEIDTSLLNETASRSTESTEVVSKDIIDDVGSQSGSTENAIEPNTNHTAKDTTDDASSQSNSIESAIVRSANDSSKPANEVTDKPYKCHICGKLFSRNSSLKCHIRLHVEGPDSLLRGSSEPSDSSLKSHIVELNPKKEEVVEPVVEPSTDENTTAIVPADENTIAIVPADEAASSALNSSRDSCDLTEDEDKRDYKCIICEKTFSRRSSLTCHYKFHPKSPISKSQDDIPVKTIIDETAMEIDRDDDAANKDQYKCEKCDRTFLQKNTYAWHLKMHETNVRKRSIDNTSSVNLTNGVNDVEMIDITSDVDVAKNNTTEPQAVDVNIYKCHLCPRSFPQLRGLKTHSGVHKRNRVDEQYKGPEILNTIVYEEVSSRKYTCCSKNHNHDDEVTKLYKCNVCCKCFCDMDNLKAHLAHNHQKEDTSETSNRRHVVESPNNTVVAIDDSGTSHEQAISCVNEDIKEQKMSISIRGLYKCGVCNKTFDEIQLLGEHVNVHIQVHNESLLNSTDDSATEELCCVGCEKTFRSQNALSRHMNEHRRREEEILVRVTSSGRKIRERRSSEDLSSSSPIKCLPCNRIFESMRAKRIHDFSKHPIEQSENEEPEPAPSTETDADCDEPRKEFVCKCCNRQWISAKALNRHKGWWSKQFHDSSKHPVEQSENDEPEPANEEQLVCECCNRQWASTQALNRHKGWNKRRLSVAAGGTQLTEPPTTEEAAFPEPDLIPIDESDVSSSVKCGCCNELFPNIPALNAHLSGQTSGAAAETATSSPNHEKNDMVNCDSLRDLIKCDRCDKFCPSIPALKLHIISDHTKKSAAQSSTKEPSTPKRNVESTVTTDTLKKLSIENEKPTESVVEPPNEIQSQTNEDAVEKLDIIHSRPKRSRKSADETIMNQVLTLQDDASKHNLQQCDLCDETFTSKRAFNSHKSTHVIDNADKPEERADVTSEAETFACCDKTFNSSRALKVHQSRHTVIATVDIAPAAHQQPPKQQKSGTKSKKFDNMESNEDTDDATDSLVKHQATDTESEEDVFVEYKCSICDKQFVSRKTLRHHREKHFKPGELDPEFSGEFSCEKCHKRFDRRTSLSVHKAYHTLLEKNAKAPIDYGSYSDMRNGVFKCNECDREFDTVKGASTHFAKAHKEPEPEPDEYACAMCDRSFSSHQGLAGHMSRHKGEASTSRHVQQEIEDFTCAHCDKSFSNSTSLKKHRTIYHDNLTKTDPECICEICKKPFCEPSSQNESEEEDEENTESEYPCTYCDRKFNNYRGLNGHMQMHQVYLCSNCDQEFITFRSYKLHIESQHPDEDAAEMNADPVKEYACDKCDKSFSSAKSLRSHKAVHSNAAAEESEPEPEPENTFKCDKCDRSFKSAKSLGGHKSAHSNAVSEFKCQKCDKTFLTAKSLGGHKSMHTKKEDEFDSENDESESEPDNESAAEDADNEEEQSNDFPCPRCDRSFNNIRSLNVHVNTHITQDNPLDLTCPQPQCNRGFVSHRALSAHFLTHKRETNMQDFECPKCKETFLVMKAMYDHFYAKHKRAKRVERVSHRSLTVASNETEIRTVSSRSRSQASAPVTAEARKMRSKSAGDCARFRDENPVKSARSSECVNKENVHNSPASTSGLRKSRRLRSTVETTSSAKWSAEMTSISEQTENQPMDVDTRTEDENDDKAAKDNMQLSCVFNDCARDFFNGTESKPKCDICSLIFGDLKSLAKHLADSHESTNSIDKKHSLSHSEPLALPWEPPSLKLKCPLCPKILSTAIGLKRHSMSVHKITTQPQVSATAIPLPSSEVGVQLEATRVSGTEQPSTEQCVEETVKLTTNVGRSSVKESIEESESSTFGVSQTVPKPMVNENESSNANVDETSAKPSVNLTERSPSDVDLTLSEESLDETEHSKLNIDQTLSEQSDKAIEWNPSSTQTDDQIVLTVGNSTDREDEPLKDTIQHGELTGNDDDVNPPQPSKCAGADDRLSCKICLRQFDHVKAFNKHVQWHKFNDQAVDVEESVVNEDSTKQRRNSNGVLTNGMASLEVLAYVKCDICAKTFTKADTLKKHAFDAHSVVITSPLLYQCNYCHKPFPRGRTLFLHLQTHGNAHSASSTPTEDIMPFECASCEKCFRLKDDLLEHVKSHMPDAGTSPPTESPINGSIEESREINGNADSDFEHDENFELKIHTEEDEQIDDVEETNNDDQSQPRPDSKAIHKCPHCDKKYPKKCYLATHIRIHIKKDDIANKKEEPKLQPMMRRRSIKLSDDTQLPIASPPKPYQCPLCDKSFRSKSVLAVHEQKHSSAKLVLRKSLKRVNEGDDFTTEDGVKSSKRASKDVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -