Tman013483.1
Basic Information
- Insect
- Trabutina mannipara
- Gene Symbol
- Mblk-1
- Assembly
- GCA_900080175.1
- Location
- FKYK01023629.1:1054-8819[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2e-17 1.4e-14 53.6 0.1 1 45 426 471 426 471 0.95 2 2 2e-18 1.4e-15 56.7 0.0 1 43 872 915 872 917 0.95
Sequence Information
- Coding Sequence
- AtgagcttcaaaaatttgaacagaTTTCTAAAATCGAAGCTTTTGTGCGGATTTCACAAAAccgacgaatcgaaaaataatgcaatGCCGGCTATAATCAGCGACATATTGAATACCACCAAAAGTCACGATATTGTCCGCGTGAAGCACTCGTATAATCACATCTACAGGAGGAAAACGAAATGGGAGCTGTCGCGGTTGTCCTTCGCCATGATGGGCATCGAAATCGTGTACGCAATCTTAACAGCGTTCGTGTCACCGGTTCTGTTGATGTACGGCGTGAAACGAGAACACGCCACACTAGTCTGGGTAATCGGTCCGCTGATGGGGTTGGTTTTCTCACCCATTCTAGGATCGTTGAGTGACCGATGTAGATTTTCAATCGGTCGTAGAAGAccatttattatatttttagccACCTTAAACGTTGCCGGATTACTACTGGTCGCCAATAGTAATTACGTTGGTAAACTATTCGGTGACCGAGAAGCCGACATATTTAGTACGACCAAGAGTTTGTCATCGTTAGACGGCAATGCGGCTGGTATTACTCAAGAAGACGTGGCCGGTACCAAAATCAGTTATTACATTTGGaccgtaatttttctaataatcgGAGCGGTTACTGTCGACTTCAGCTGCGATACGTTGCAAAATCCCAGCCGAGCGTACGTCTTGGATGAGAATCAAGAGCAATCGAAAACGCAAAACCATTCCAGTGAGAGTTCGTACGAAAGCGAAGACGGCGATTCAGACCGAGGAAACAGCGTGAACTTCCAAAGATCTCCATTTAACGCATTACACATTCCCGAATCGTATTTTACCAAAACTCAACTGAACTCTATGTCAAGTCTAGACTCGGTTGCTTCATCAGTGGCAGCATCAGCAATGGCTGCGGTAGCCGCGATGAATAACGTAACATTAGGAAAATTACGATTTCCGCCGAACGCAGCCAGCGACATGCCTTCGTGGTACTTAACGGCGGacgcgaataattttaaattggacGCTGCTGCCGCCAAAAGGGAGGATAACGAGACTGATGTTGCGGATGAGCAACCTTTAGATCTAAGCGCGAAGTCGTGTTCGCCGTCCAATTCGCCAGCAGGGTCTCCGGTGCAGGCGTCTTCGCCGGTTGTGCCCAGTTCGCAGAATTCCTTATTGTATTCTAGCGCCGGTCTGGCTAGCGCGTCCAAAGTTCCAGTGTGCAACACTAATCGTCATATTTTCAAGGCGAAACCACGATTAAGTCCCATCACTGGAAGACGTACATACACCGAGGAAGAGCTACAAGCAGCCCTGCGCGACATCCAAAGCGGTAAATTGGGTACTCGGAGGGCGGCAGTCATTTACGGTATACCCAGATCGACGTTACGAAACAAAGTGTATAAATTAGCCTTGGAGAAGGAACGCGATAACGCGCCCATATTCCCAAGCCTAACCCTGGAAGACAAACGCTTAGAAGAGGTCGACGTACCTTGCGACGACAAAGACGAATCGGAGGAACgagacgacgaagacgaagaagtggaaaaagaaatgtcGGCCACCGAGGACGACAAAGACGCGGAAAAGCAATTCATGAAACCAGTATTCACGGTCGAAGATCTCTTTAGACTTTCCAAGCAATCGGCCGGCGGGCAGCTGGAAAACGATTCGTTGCGGGCGCTGCTTCAGCAtggtagtaaatttttcgccgagcAGCAGCACAGTGTGAAGCAGGAGAAAGATTCGACGAACCAGCTACCGAATCAAGTGCCGACGCCTTTGTATTCAATATTTCCTCCGGGCCATGCGGAAATCTGGGGTAACCTTGATCCGTCGATTGCGCCGTATCTCACTCACGTCATGGCTCTGTCTAGGGAGAATGTGAACATTCCGTCGTTGATCAACCACTCGaatccttttttcaatttacgaaaTCAAACTCCACCGAGTGACAGTCCGTCTGACGTATCGCCTACGCTTAGTCCCAAGTTCCCATCGCCTCTGTTCCCACCAGAACTTGTGCAGCGTTTCATGCTGGCCGAATCGTCTTCGAAAGAGCTGCCCAACTCTGGTAAGACCGAATCGTCGTTTTCGTCGCCGCCCAACGACAGCCAGGAGGACGCTGTTAGTAATAATTTGCAGTCGAACGCTCTCAGTCGACAACCGCTTTTCAAACCGCCCTACCGGAACGGTTCGGACATTGCAGACTTCAACGCGGACCACAAGTTTTCCGAAGGATCGGAGAAAAGCTTGACGTCGTCGCCGCCTCCCACGAGCGGCGCGCGTAGCGACTCCTCGTCGCCACTACCAATAAACCATAAGCTAGGTTTAAATTTACGCGATGTGATAGCCAAAGGCATCGGTCAACGGTTTCAGCAGCCGCCAGACATACCAATCTCACACATTGCGGGAACTTCGAGCATCGACGGACTGCATCGTGTTACGTTTCCAACGCTGTCCGCCACTTCAGTGATAAAAAGCCAGGGCGCGATGGACGCCGAAGACGCGgccaaaaaattcactaaccAAATTAAAGTTCCTCTACCTTCGTCGGCGGCTAACAGCGCGAATTCGGCAAACAGCGGCAAAGGTACCCGACCGAAACGCGGCAAATACCGTAATTACGACCGAGACAGCTTGGTCGAGGCGGTTAGGGCCGTCCAACGGGGCGAAATGAGCGTCCACAGAGCGGGCTCTCACTACGGCGTTCCTCATTCCACCTTGGAGTACAAAGTGAAAGAGAGGCATTTGATGAGGCCGCGCAAACGCGAACCTAAAAATCAGCCGGATGATTTGAAACGGCGGGAAGACGGCAGTGTTCTCAGACTCTCGGTCAATGAGAAACCTACGCAGCATTCTCCGTCCTCTCAACCGTCGAAAATCGTCAAACCACCGTTCACCACTCCTCCGTCGTCGCTGCCGACGACGCCGAATGGTATGAAAATACCGCCGTTGTTCGATACGCCGCATCCGTTCGCTCCTGCGACACCTTTCTCTTTCTGGCCCTTCCACCAACTGGCCATGGATTACGCGAGAAATTCCACCTTCTCGTCCATTCCCGATCACGTTCTCACGTCGCAGTTCATGCAACGCATGCAGGAAGAATCAGTCAGAAATAATCCGCTGTCTCATACGTTGAGCAAGAACACCAGAGAGATAGCCGAAAGCTTGCTCGACGGGTCCGGTTTTAATGGTAGTTTCTTGGACGGTGTGATAAGATCTAGTCTCGACAGTGAACAAACTTTCAATGAGCACATCCAAAAGAAGAATCTGATGCTCGAGCAACTCTACAGAAATAAATCCCTTTACTCAATGAATAGGCAATCTGCCGGCGAATCGGACGACGATAGTAAACCAAATATCAATCATATTATTACGCCTACACTTTTATCCTCCATTGTCGCCAAAGACGCCAAAGAAGCGGTCGCCAAGAACGTCGACGACGATGCCAACAGTGATGACAAGGCTGAACGATCTTCAttagatgaagaaaaaacaactgcCAGCGTGAAAGATGAACCCAGTAGCGATACTGtacagaatcaaaattttaatttagaatctCAAATTACCGGCGTCGAAATCAAAACCGAAAAGAActga
- Protein Sequence
- MSFKNLNRFLKSKLLCGFHKTDESKNNAMPAIISDILNTTKSHDIVRVKHSYNHIYRRKTKWELSRLSFAMMGIEIVYAILTAFVSPVLLMYGVKREHATLVWVIGPLMGLVFSPILGSLSDRCRFSIGRRRPFIIFLATLNVAGLLLVANSNYVGKLFGDREADIFSTTKSLSSLDGNAAGITQEDVAGTKISYYIWTVIFLIIGAVTVDFSCDTLQNPSRAYVLDENQEQSKTQNHSSESSYESEDGDSDRGNSVNFQRSPFNALHIPESYFTKTQLNSMSSLDSVASSVAASAMAAVAAMNNVTLGKLRFPPNAASDMPSWYLTADANNFKLDAAAAKREDNETDVADEQPLDLSAKSCSPSNSPAGSPVQASSPVVPSSQNSLLYSSAGLASASKVPVCNTNRHIFKAKPRLSPITGRRTYTEEELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLALEKERDNAPIFPSLTLEDKRLEEVDVPCDDKDESEERDDEDEEVEKEMSATEDDKDAEKQFMKPVFTVEDLFRLSKQSAGGQLENDSLRALLQHGSKFFAEQQHSVKQEKDSTNQLPNQVPTPLYSIFPPGHAEIWGNLDPSIAPYLTHVMALSRENVNIPSLINHSNPFFNLRNQTPPSDSPSDVSPTLSPKFPSPLFPPELVQRFMLAESSSKELPNSGKTESSFSSPPNDSQEDAVSNNLQSNALSRQPLFKPPYRNGSDIADFNADHKFSEGSEKSLTSSPPPTSGARSDSSSPLPINHKLGLNLRDVIAKGIGQRFQQPPDIPISHIAGTSSIDGLHRVTFPTLSATSVIKSQGAMDAEDAAKKFTNQIKVPLPSSAANSANSANSGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSHYGVPHSTLEYKVKERHLMRPRKREPKNQPDDLKRREDGSVLRLSVNEKPTQHSPSSQPSKIVKPPFTTPPSSLPTTPNGMKIPPLFDTPHPFAPATPFSFWPFHQLAMDYARNSTFSSIPDHVLTSQFMQRMQEESVRNNPLSHTLSKNTREIAESLLDGSGFNGSFLDGVIRSSLDSEQTFNEHIQKKNLMLEQLYRNKSLYSMNRQSAGESDDDSKPNINHIITPTLLSSIVAKDAKEAVAKNVDDDANSDDKAERSSLDEEKTTASVKDEPSSDTVQNQNFNLESQITGVEIKTEKN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01150251; iTF_00194219; iTF_01262353;
- 90% Identity
- iTF_01150251;
- 80% Identity
- -