Tman000809.1
Basic Information
- Insect
- Trabutina mannipara
- Gene Symbol
- bab2
- Assembly
- GCA_900080175.1
- Location
- FKYK01018927.1:14432-17401[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1e-10 7.1e-08 32.1 0.0 1 39 477 516 477 520 0.90 2 4 1.4e-11 1e-08 34.8 0.0 2 39 532 569 531 572 0.92 3 4 8.9e-19 6.3e-16 57.9 0.0 1 45 586 631 586 631 0.97 4 4 1.2e-16 8.5e-14 51.0 0.1 2 43 639 681 638 682 0.95
Sequence Information
- Coding Sequence
- ATGGCCAACATCGGGCAACATTACTGTTTACGATGGAATAATTATCAGTCAAACATGACGTCTGTGTTTTACCAACTGCTGCGTACCGGAGCTTTCGTCGATGTAACATTAACTTGTAACGAAAACTCTTTAAAAGCTCACAAGGTCGTTTTATCCGCATGttcttcgtattttcaaaaattactcacaGATAATCCGTGTAAACATCCAACCATAATTCTGCCCCAGGAAGTTGGCTTCAATGACTTGAAATTCATTATCGATTTCGTATATCGTGGCGAAATCAACGTTTCAGAAGCCGAGCTACAATCTCTGCTGAAAACGGCAgatcatttgaaaatcaaaggaTTATGCGAAGTGCCAGAAGGCGAAGAAGACGATATGGACGAGGCAGGTTGCGGCGAATCGGTAACCGACGTTAGCGTTCTAGGAGCTCATATGATGATGATGCATGATAAATCGTCGCAAAAACAACACAAAATACTCGCCAAGTTAAAACCGGCCATGCATAGGTTTTCGGCAAATATCAAACGAAAGCATCTTCCGCAAGATGTCAACAGTACGAGAAAGTATTATATTAAAGATAATAAATCCAACGCCGGCCTTCAAGTAGAACAAGGATCAGTCCAACTGATACAAGCCAGTACTATAAATCCCAATGATATTTTAGATACGACGAATAATACTCCACAATTTCACAACATGCAACCGTCAACCAACTGCATCACAGTAGCAACCTCCACAGAGGAAGATGACAAATCAACGATCAACAACGTACCGGTAGTAATATTAGATAATCGACATCAGCAACAAATGTCTACGACAGTTCATTCATCGTTGCACTACGTTCAAGAAAGCAatcagcagcagcagcaacaacagcaacaacaacggtgccaacaaaatgaaaaaatcatcatgaCTAGTCCATCGCCAATGATGTCCTCCTGTACTACACTAACAACTTTACAGCCTCAGCAATCTTTACTTTTAGATCGAAATAGCCATCACCTTGGACCAACGCCATCTCAGATGTCAAATCCCGAAGATAAACAATCAGACGTAGAGATGATCTCAGAAGGACAGCCTCCAGGACCTACAGCTACTCCCGTACATTGTCATTCGATGGAAATGCAACAGCATAGTCCAACCCATCGAGATATCGCagTTGATACCTCTGGGATGCAAACAGATGACATGAAAGTTAAATTTGAAACGCTAAGGACCATGGATCAGACTTCAGACAGCTTGGATACGATCGAGAATCACATGTCTGAGCACAGTATGAACGACGACGAACATACAATGCAAACAATGATGATCACCCCAGAATTACTAGGATTAATACCATCCACTTCATCTGCTCCTTCTTCCGAAGTCGGCAGTGATAACGGTAAAAACAACATGACTTTGTCTAAAAAAGATTGGACCCAGGAAGACATGGACGCCGCCTTAGGCGCTCTCCGAAACCATCACATGAGTTTAACTAAAGCTTCCTTGACTTTCGGTATTCCATCGACAACTTTATGGCAGAGAGCACACAGACTTGGTATAGATACTCCAAAAAAAGATGGCCCTTCTAAATCTTGGAACGAAGACGTCCTGAACGTGGCTCTTGATGCATTACGTACCGGATCTCTTAGCGCGAACAAAGCTAGTAAAGCTTAcgGTATCCCCAGTAGCACTTTGTACAAAATAGCCAGGCGAGAAGGTATACGATTGGCAGCACCGTTTAATGCAGCTCCTACAGCTTGGACGCAAGACGACTTAGAAAGAGCTTTGGAAGCCATCAGGACCGGACAAACGACCGTTCAAAAGGCAGCTACCGAATATGGTATTCCAACTGGTACACTTTATGGGCGATGTAAGCGAgagaaaatcgaattatcTCGTAGTAATCCTACACCTTGGTCTCAAGACGCTATGTCCGAAGCTCTAGAAGCCATCAGattaGGCCAAATGAGTATTAATCAAGCTTCTATACACTACAATTTACCTTATTCGTCGTTATACGGTAGATTTAGAAGAGGTAAATACGAAGCCGATCATCTAGATCACGAAGACGACAACACTACCGGAGTTGTAGTTGACATCCAACCGGGCGGCagtcaacaacaacaacagcaaatGGTTCAACAATCTCACGCTGCCGAAATGCAACAACCCGAGCCTACCTCGTCTCAAACCCAACAGCCAACAGCGATTCAGCCGCAGATCATGTTGTTGCAATATCAACATACTCCAGCTACACATATCCAAATGTATCAACCGGCTGCGCCCAGTTGA
- Protein Sequence
- MANIGQHYCLRWNNYQSNMTSVFYQLLRTGAFVDVTLTCNENSLKAHKVVLSACSSYFQKLLTDNPCKHPTIILPQEVGFNDLKFIIDFVYRGEINVSEAELQSLLKTADHLKIKGLCEVPEGEEDDMDEAGCGESVTDVSVLGAHMMMMHDKSSQKQHKILAKLKPAMHRFSANIKRKHLPQDVNSTRKYYIKDNKSNAGLQVEQGSVQLIQASTINPNDILDTTNNTPQFHNMQPSTNCITVATSTEEDDKSTINNVPVVILDNRHQQQMSTTVHSSLHYVQESNQQQQQQQQQQRCQQNEKIIMTSPSPMMSSCTTLTTLQPQQSLLLDRNSHHLGPTPSQMSNPEDKQSDVEMISEGQPPGPTATPVHCHSMEMQQHSPTHRDIAVDTSGMQTDDMKVKFETLRTMDQTSDSLDTIENHMSEHSMNDDEHTMQTMMITPELLGLIPSTSSAPSSEVGSDNGKNNMTLSKKDWTQEDMDAALGALRNHHMSLTKASLTFGIPSTTLWQRAHRLGIDTPKKDGPSKSWNEDVLNVALDALRTGSLSANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTAWTQDDLERALEAIRTGQTTVQKAATEYGIPTGTLYGRCKREKIELSRSNPTPWSQDAMSEALEAIRLGQMSINQASIHYNLPYSSLYGRFRRGKYEADHLDHEDDNTTGVVVDIQPGGSQQQQQQMVQQSHAAEMQQPEPTSSQTQQPTAIQPQIMLLQYQHTPATHIQMYQPAAPS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01262654;
- 90% Identity
- iTF_00194509;
- 80% Identity
- iTF_01472565;