Tman016267.1
Basic Information
- Insect
- Trabutina mannipara
- Gene Symbol
- JARID2
- Assembly
- GCA_900080175.1
- Location
- FKYK01000088.1:6184-12191[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.1e-22 1.1e-18 67.5 0.0 6 89 998 1079 994 1079 0.93
Sequence Information
- Coding Sequence
- ATGGAAACGCTTGGTAAAGACTTACTGCGTGGGGACGAAAGCTACGACGAAGATGACTTATCGATTGAAGATTACTTCGAATTATCCAACATCGAACCTGtgaaatcgAAACAAGGAGTGAAAGAGCCATCCAAGAAACCCAAGGCTATCGTTTCGGTTAAaagaaaacctcaaaaattgaatgataaaATTGCCGATAAAAAATCCACGACCAAAATACTAGATAAGATTCGTAAACCtattaaaaaagtcattaaaaaagatagaggtcaaattgaaaaattaaacagcgaattgaaaaaaatcgtggaCGATAAGCctcttaaagaaaaattggaatgtgTTACGAAGTCGGTAGATATAGATAAAGAATTGGAAACTATTGACCAAACATTAAGAAtaacaaaagataaaaatgtaaacgatTCGTCTGAATCTATCGATGAATctcctaaaaatgaaaaactatcgAATAGTGATTCctcttttgaaataattcaaaatatattaatatcCGACGATGAAAGAGAAACAGTTGAACTGTCGAAAAGTTATGACAGTATTGAGAACATCGATATTCCTGATTTCGTCGTAGTTAGTAAAGACGAACAAAATGGTGCCGAGAGTCTTATTctacaaaaagaaaaggtggctgcggaaaaaattaaaaataatgtcgcgcgaaaagaaaaaataaccgtacaaaatattgaaaatatcgttttGGGAAAAGACGATGACGAGCTTATTGGTAATAGTATTCAGCGAAAAGAGAGAAACACTTCTAACGTTAATACAAAAAATTGCGTGAAAAAATCGTcagaaaaagttggaaaatttgaaatttcaaaacagacAAAGAAAGattgttcgaaaaaattgccggAAAAGACAGAAAAATCggaaattcctaaaatattTCCGAAAAgttGCCCCAAGAAACCAGGCGAAAAGGCAGAGAATGCGGTTCTCATTTCTACCACCAAAAaccacttgaaaaaatcaattgaaaaaatagacaaaacgCAAGTTCcgtcgaaaaaatcatctgaaaaagtagaaaaatcagtagttctgctgaaaaaatcaactgaaaaaGTAGACAAATCGGAGGCTCcggtgaaaaaatcgatagaaaATATGGAAAAGTCGGATGGTGTAGTGAAAAAATctatagaaaaaatagaaaaatcaaatgcaCCGTTGACAACTAAAAACACTTTAAAAGAAGTTCCGTTGAAAAAACcgtcagaaaaaattatcaaattggaAGTTCCATTGAAAACACcgccagaaaaaattatcaagttggAAGTTCCGTTGAAGAATGCATCAGAAAAAACTATCAAGTTGGAAGTTCCACTAAAGAAGACGacagaaaaagttgaaaagccAGAAGTTTCAAATACACCCAAAAAcaattgtttggaaaaattatctgaaaaaatagaaaaatcgattatagTTCCCAAGCCAGACGTTCAAgtaagtaaagaaaaagatgcagaaaaagaatcacaaaAAACAGGGGAAAATTCATCTACAGAGATGCctagtaaaacaaaaaatatcgaaaagtcTAAACCGGATAGTAACTTCATCACTGACGAAAGTACAAACAATAAGACGCATTCGCCGACCGAAATAACGGTCGCTAAAAAGATTCTCAACCGTAAGAAATCATCGGTGAAGATAATTCGAGCTAAAACGATAAAACCagcagaagaaaaacaaactacCGATGAAGTTGACGcgtcaaaaataacaaaaactgAGGAAGTGAAAGCTGAAACCGAAGCAAAAAAAGAGCTCGTCGTTGGAGATAGTACAGAAGATAGTTCTGAAACGAAACCAATGCCAAAATTGGTGTTTACCAATGGTAAATCCACAATGACGGAGGAATGTTCACCGAAATCGATAATTCAAACTATAGACGCCTCCAATAATAAGATGTTCTGTTTGGaaagtaagaaaataattttcaagaaaaataaatgtccAACGGTTACTGAGGATAAAGAAGAAATTAGTTCTCGAAAGACTGAAGCCTTCTCGGCAGATAATGAAAATAGTGTATACGCTTTTGAACCAGACTTACCTACTACTAGTCCACCATTTAGAAGACTGAAACCTGTTACACCGCCCAAGTCCCTCATCAGTGGTAATTCAATCGCTGTACAGGTGAATTTTGATAGCGGCACTAAAATAGAGTGTTCTAGTACATCGGAGACGCAAGTGTCGTCTACTACTGATTGCGACGATCGAGTATTTTACATTCCCATACAAACTTCGGACACGAGTAGTACTCTAGGTGTGGCTGTCAAACTAGATACGGACGGAGTTAATCAGAAAATCATCATGAGTGCCACGTTGGTTACCAAATCACCGTCATTTACCACTTCCACGGCTACTACCGTCGCATCGAAgCCTGTAAGTTCGGAGCCGAGCACTTCTGAAGTAGTCGAACGAACAGAAATACCAAAGAAACCACTCTCGAAGGAGAATTCCGATAAAGTAGTCGCTACAGCTGATTCTCAGTCTTCCACTCGAACTTCTACTGATTCTCCATCTTCAACGGTTGTTTCTCctaaaccgaataaaaaagtCAGCTCTACGACCAAACTAAATCAATCAGTGAAGATCGTGAAAATCAACAAAGTCAAAAAACCTATACCTTCTAAACCGAAGCCCAAGCCCGTTAAAGCTAAAAGCACCAAAAATAAACCAGCAGAAACTAATAAACCAGCGAAAAGTGCTCCGTCTAGTGAGATTCTGGAGGCTCCGACGTTCTATCCTTCTGAAGCTGAATTTAATGATCCGTTGAAATACATAGATACCATTCGACCAGtcgctgaaaaatttggtCTATGTCGAATTGTTCCTCCATCTAATTTCAGAcctGAATGTAAAGTTGCCGATGAGATGAGGTTTACCGCTTATAATCAGTACGTACATAAGATGCTACATCGTTGGGGTCCAAATGTCAAAGAAATGATGGCTATTAGAAAATTCCTCGCTACACAGAATATCCAATTAACTCATGCTCCCTGGATCGGCGGTATGGAAGTAGATTTACCTCGATTGTACCAAATTGTTCAGCAATGTGGTGGATTGAAAGCAgtcattgaaaaagaaagatggcATCAAGTGGCCGATGTAATGAAAATACCGAAATTAGCTCAAGATCGTATTACGAAATTGGATGACATATATTGCAAATATTTACTTCCTTATGATATTTTATCTCATAacgaaagagaaaaattattcgacgaaGTAGAAAAAGACTGGAATACTCACTTAGAAAATCCCAGCGATGATGAAGATATTTTTGACGACGTCGACGAATGCATCGTTAAAGGTCGTACGATGCCGTTAAGCTGCTTCTATCGAATAGCTCGTAACACGATGATGATGTGTTTCGGTAGTACCGAAGGTGAAGGGGGACCTTCAACCGAAACCATCGAAACGGAATTTTGGAATCACGTATCTCAACGCAAATCTCACATTTGCGTACATTCCGGTTCCATCGAAACCGGAGTCCACGGATATGGATTTTCTGTGGCGAAAAATAGCACGTTTCGAAAACATCCGTGGAATTTGAAAGTATTAACGAATAATTCGGCTTCGATTTTAAGATATCTTGGACCAATAATGGgtATTACTGTTCCCACATTACATGTTAGTATGCTGTATTCTGCATGTTGTTGGTATCGTGATCCGCATGGACTGCCTTGGATCGAGTACTTACACACCGgagcaaataaaatttggtatGGAATACCAGACGAATACAGTGAACAGTTTAGCGAAGCGATGCGTACGTTGGTTCCAAGATACTGTCGCGATAAGAAAGTGTGGCTTCCATCAGACACGGTCATGATACCACCGCCATTATTAACAGCCAAAAATGTACCTTTGTCCAGAGTTGTCCAACAACCTGGTCAGTTTATCGTTGTCTTTCCAAAGGCATTCACTTCTTGCATATCGACCGGATATATGGTCTCAGAGAGTGTGTACTTCGCCACAGCTTCTTGGCTGAATTCTGCTAAGCAGATATTTTCGGATATGCAAGAAAGCTGTGAACCATCGGTATTCTCTTTGGAACAATTACTCATTAGCGTAGCTACTGATGTTCGGGCTAGTCTTGTGATTCTCGGCAAAatactaCCTTTATTGATTGAACTCCGCGATTCGGAAGTGGCACTTAGAAGTCAGCTTACAAAATTAGGTCTAAATACTtcggagaaaatgaaaataaacaaaaaacgcAAAACCAAAGCGTCGTTCAGTGATGAAGATAATTACGAATGTGAAATATGCCGAGCTAATCTTTTTGTATCGTTTaTAATTAATTCCCACGAACAAACTAACTACTGCTTGAAGCATGCCACAAATTTGTTACAAAAGAAACCATCTCAAGTGAAATACTGTAAATTGATGTATGCTTACACTgagGAGGAATTAGaagatattattaaaaaagttcaagaaaaaatggaaacgaaaGGTAATCGTAAACCGAGCGTGAAGTAG
- Protein Sequence
- METLGKDLLRGDESYDEDDLSIEDYFELSNIEPVKSKQGVKEPSKKPKAIVSVKRKPQKLNDKIADKKSTTKILDKIRKPIKKVIKKDRGQIEKLNSELKKIVDDKPLKEKLECVTKSVDIDKELETIDQTLRITKDKNVNDSSESIDESPKNEKLSNSDSSFEIIQNILISDDERETVELSKSYDSIENIDIPDFVVVSKDEQNGAESLILQKEKVAAEKIKNNVARKEKITVQNIENIVLGKDDDELIGNSIQRKERNTSNVNTKNCVKKSSEKVGKFEISKQTKKDCSKKLPEKTEKSEIPKIFPKSCPKKPGEKAENAVLISTTKNHLKKSIEKIDKTQVPSKKSSEKVEKSVVLLKKSTEKVDKSEAPVKKSIENMEKSDGVVKKSIEKIEKSNAPLTTKNTLKEVPLKKPSEKIIKLEVPLKTPPEKIIKLEVPLKNASEKTIKLEVPLKKTTEKVEKPEVSNTPKNNCLEKLSEKIEKSIIVPKPDVQVSKEKDAEKESQKTGENSSTEMPSKTKNIEKSKPDSNFITDESTNNKTHSPTEITVAKKILNRKKSSVKIIRAKTIKPAEEKQTTDEVDASKITKTEEVKAETEAKKELVVGDSTEDSSETKPMPKLVFTNGKSTMTEECSPKSIIQTIDASNNKMFCLESKKIIFKKNKCPTVTEDKEEISSRKTEAFSADNENSVYAFEPDLPTTSPPFRRLKPVTPPKSLISGNSIAVQVNFDSGTKIECSSTSETQVSSTTDCDDRVFYIPIQTSDTSSTLGVAVKLDTDGVNQKIIMSATLVTKSPSFTTSTATTVASKPVSSEPSTSEVVERTEIPKKPLSKENSDKVVATADSQSSTRTSTDSPSSTVVSPKPNKKVSSTTKLNQSVKIVKINKVKKPIPSKPKPKPVKAKSTKNKPAETNKPAKSAPSSEILEAPTFYPSEAEFNDPLKYIDTIRPVAEKFGLCRIVPPSNFRPECKVADEMRFTAYNQYVHKMLHRWGPNVKEMMAIRKFLATQNIQLTHAPWIGGMEVDLPRLYQIVQQCGGLKAVIEKERWHQVADVMKIPKLAQDRITKLDDIYCKYLLPYDILSHNEREKLFDEVEKDWNTHLENPSDDEDIFDDVDECIVKGRTMPLSCFYRIARNTMMMCFGSTEGEGGPSTETIETEFWNHVSQRKSHICVHSGSIETGVHGYGFSVAKNSTFRKHPWNLKVLTNNSASILRYLGPIMGITVPTLHVSMLYSACCWYRDPHGLPWIEYLHTGANKIWYGIPDEYSEQFSEAMRTLVPRYCRDKKVWLPSDTVMIPPPLLTAKNVPLSRVVQQPGQFIVVFPKAFTSCISTGYMVSESVYFATASWLNSAKQIFSDMQESCEPSVFSLEQLLISVATDVRASLVILGKILPLLIELRDSEVALRSQLTKLGLNTSEKMKINKKRKTKASFSDEDNYECEICRANLFVSFIINSHEQTNYCLKHATNLLQKKPSQVKYCKLMYAYTEEELEDIIKKVQEKMETKGNRKPSVK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01150138;
- 90% Identity
- -
- 80% Identity
- -