Trut041279.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Toxorhynchites rutilus
Gene Symbol
stc
Assembly
GCA_029784135.1
Location
CM056649.1:167927709-167941108[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 14 1.3 3.8e+04 -3.5 1.1 15 18 271 274 270 275 0.81
2 14 1.8 5.3e+04 -4.0 1.6 15 19 298 302 297 302 0.81
3 14 0.084 2.4e+03 0.3 0.3 4 10 331 337 330 337 0.95
4 14 8.8e-06 0.26 13.0 17.0 3 19 344 360 343 360 0.93
5 14 2 5.8e+04 -4.4 1.0 6 10 386 390 386 391 0.94
6 14 8.9e-09 0.00026 22.6 12.8 1 18 396 413 396 414 0.98
7 14 6.5e-07 0.019 16.6 10.6 1 18 454 471 453 472 0.93
8 14 0.00025 7.3 8.4 10.0 1 18 513 534 513 535 0.85
9 14 0.0062 1.8e+02 3.9 9.3 1 11 575 585 575 586 0.96
10 14 2 5.8e+04 -4.6 2.9 4 10 590 596 589 596 0.62
11 14 1.4e-07 0.0042 18.7 15.9 1 18 602 619 602 620 0.97
12 14 2 5.8e+04 -6.4 10.7 10 18 667 676 657 677 0.72
13 14 1.9e-06 0.055 15.1 7.5 1 15 713 727 713 729 0.94
14 14 3e-05 0.86 11.3 13.9 4 19 747 765 745 765 0.91

Sequence Information

Coding Sequence
ATGGCTGATGGTGGGGAAGGTTCGTCGTCTGCTAGTTCCGCTAGACATCAAAGTTTCGAGCAATTCGTGTCACAATTTGCCGCGCGAGCTTCCGTACACGATTTTTCCAGCCAAAATGGAGCTGGAGAATCGGGAGCGCCAATGGCTGCACCTGAATCATCCAATTTGAAACCAACAGCGACAGAGTTTTTCCCCCGCTTCCCGAAACATAACCTGCGGGATCAGGATCAAAGCAATGGTCACAGTGACGCTAGGAGTGAAGAGCGTGCGAAAGGAGCGGTTCGAAGGCAGTATGATGGATCGAAGTGGAACAATGGACGGAGAAACAATCGTAACGGGGTCCGCAATGGATTTGGGAGGAACAGAGAATCAAATTTGAACACCTTTCGTGATAGGAGAGAGGGCGATGACGAAGGAAGGTTTTATGAAGGATCGAATTACTCGGATCGAAGGGACCTGGGGAATGGTTTTAGGCCACATCAACAGAATCGACCATTCCAGCAGAATGGTAGATGGAAGCCACATTCGGGCAATCGGTATGGTGGTGGTCGGAACGGACGTGATCAAAGACAAGAGCAAGACAATTACAACGGACAGTTTAACACAAATCGCGAAGTTCATAAGGAGATTGAGATGAAGGAACGAAGACCTAACGTTTATCAGCGGAATAGAGCGCGTTTGGATAAGTTGGAGGCTAGAATCTTGTCCAAATGCTCTCAACGTGAGAAGCTTACACGCGAGCTGGAATCTTCCAAACTGGAATGTCTCGTATGCTGTGAGTTAGTAAGACCGGCGCAACCCATTTGGTCATGTCCCAATTGCTATCATGTGCTACATCTCAACTGCACTACCAAATGGGCCAGCAGCTCCAAATCCGACGAAGGTTGGCGCTGTCCGGCTTGTCAGAACATAACGCAAAAGATCCCACGAGAATATTATTGCTTCTGTGGCAAGCAGAAGAATCCACAGTACAACCGAACTGATGTGGCACATTCCTGCGGGGAGCTGTGTGCTCGGGAAGAGTTGTGTGAACATCCGTGCACACTGCTTTGCCATCCGGGACCTTGTCCTCCGTGTCAGGCTATGGTCCAGCGCAGTTGTGGGTGCGGTAGATCCGTTAAACCCATGCAATGTAGCCAAAAAGAAGAGATTATGTGTGAATCGATTTGCGAAAAACCTCTGAACTGTGGGATCCATAGTTGTCAGCAGAAATGCCACAGCGGTGAGTGCAACGAATGTGTCGAGACTTTAGAGCACGAGTGCCACTGTGGGAAGGAGAAGAAAAATGTTAGCTGTAATGTTATCAACTTGGACAACACCCGATTTAGTTGTGGGAAGGTCTGTCAAGCCGAGCTTGATTGTAAAAATCACGAATGTATGGCAATTTGTCACAAGGGGCCTTGTGGGAAATGTGCACTGTCGCCTGAGATGGTAACGTCATGTCCTTGCGGGAAACAAGCCGTTGCTTCTGATGAGCGTTTGACATGTTTGGATCCGATTCCGTTGTGCAAAGGCGTTTGTGGGAAGCAGTTGATTTGTGGGAACCCAGGATCGCGTCATTTGTGCACTGCGCGCTGCCACTTGGGTCAATGTTCCGCATGCAATAAATCAACGGTTGTGAAATGTCGCTGCGGTCATATGGATCAGCAGATCAAATGCAAAGAGTTGGAGAGTCGTGGCGTGGGTATAAAGTGTAAGAAACGCTGCACAAAAATGAGATCTTGTGGTAAACACAAATGCAACCAGGAATGCTGCATTGATATCGATCACATCTGTCATAAAACATGCTCGCAAATGCTATCCTGCGGTCGACATCGTTGTGACAAGCCGTGTCATAAAGGATCCTGCTCAGCTTGTCATCGGACGTCTTTCGATGAGTTGACCTGTGAGTGTGGGGCAAGCGTTATTTTCCCACCAGTGCCTTGCGGAACGAAAAAACCTTTATGCGATAAACCTTGCACCAGACCCCACCGGTGTACCCATCCCGTGCTCCATAACTGCCACTCGGATCCGGATTGTCCACCGTGCGTGGTTTTAACCAGTCAATTCTGCTACGGGAAACATGAGCAACGCAAAACGATTCCCTGCTATCAGGATTCGTTCAGCTGTGGGCTTCCATGTTCGAAACCACTGCCATGTGGCCGCCACAAGTGCATCAAACCCTGTCATGAAAATGAATGCTTCACCGAAGGAGCGATTTGCAAGCAGTCTTGTACAACCACGCGTACGGGCTGTCCCCATCAGTGCAAAGCACCCTGTCACGATGGCGAATGTCCAACGGATTTGCCATGCAAGGAAATGGTCGAGGTCCAATGTGAGTGCGGAAATCGCAAGCAAATGAGAACGTGTTACGATTTTAGCAAAGAATACCGCCGGATAACTTCCGCCCAATTGGCTTCCTCGATGCTGGAGATGCAACGTGGCGGATCGGTGGAGCTCAGTGATATAATTGGACCGGTTAAGCCGAAAAACAACAAAACCCTGGAATGCAGCGAGGAATGCCGACAGTTGGAACGCAACCGACGGCTCGCCATCGGGCTCCAGATTCGCAACCCGGATATCTCCGCCAAGCTTCAGCCCAACTATTCGGAATTTTTGAAGACCTTCGCCAGAAAGGACCCGGCGCTAATCAAAATGATTCACGAAAAACTCTCCGAGCTGGTCAAGTTGGCCAAAGAAAGCAAACAGAAATCTCGCAGCTACTCGTTTCCGGTTATGAACCGGGAGAAGCGTCACGTGGTGCACGAAATGTGTGCGATGTTTGGCATCGAATCGGTAGCCTACGATGCCGAACCGAACCGGAATGTTGTCGCCACTGCGGATCGTTTCAAGtCCTGGCTACCGAGCATGAGTCTGTTGGAGGTTCTTCAGCGCGAGAACGGCCAGCGGCGTGTCATTGTACCCAACTTAAATGCCTGGGGGAGGACGGCCAACAGCACGAAATGA
Protein Sequence
MADGGEGSSSASSARHQSFEQFVSQFAARASVHDFSSQNGAGESGAPMAAPESSNLKPTATEFFPRFPKHNLRDQDQSNGHSDARSEERAKGAVRRQYDGSKWNNGRRNNRNGVRNGFGRNRESNLNTFRDRREGDDEGRFYEGSNYSDRRDLGNGFRPHQQNRPFQQNGRWKPHSGNRYGGGRNGRDQRQEQDNYNGQFNTNREVHKEIEMKERRPNVYQRNRARLDKLEARILSKCSQREKLTRELESSKLECLVCCELVRPAQPIWSCPNCYHVLHLNCTTKWASSSKSDEGWRCPACQNITQKIPREYYCFCGKQKNPQYNRTDVAHSCGELCAREELCEHPCTLLCHPGPCPPCQAMVQRSCGCGRSVKPMQCSQKEEIMCESICEKPLNCGIHSCQQKCHSGECNECVETLEHECHCGKEKKNVSCNVINLDNTRFSCGKVCQAELDCKNHECMAICHKGPCGKCALSPEMVTSCPCGKQAVASDERLTCLDPIPLCKGVCGKQLICGNPGSRHLCTARCHLGQCSACNKSTVVKCRCGHMDQQIKCKELESRGVGIKCKKRCTKMRSCGKHKCNQECCIDIDHICHKTCSQMLSCGRHRCDKPCHKGSCSACHRTSFDELTCECGASVIFPPVPCGTKKPLCDKPCTRPHRCTHPVLHNCHSDPDCPPCVVLTSQFCYGKHEQRKTIPCYQDSFSCGLPCSKPLPCGRHKCIKPCHENECFTEGAICKQSCTTTRTGCPHQCKAPCHDGECPTDLPCKEMVEVQCECGNRKQMRTCYDFSKEYRRITSAQLASSMLEMQRGGSVELSDIIGPVKPKNNKTLECSEECRQLERNRRLAIGLQIRNPDISAKLQPNYSEFLKTFARKDPALIKMIHEKLSELVKLAKESKQKSRSYSFPVMNREKRHVVHEMCAMFGIESVAYDAEPNRNVVATADRFKSWLPSMSLLEVLQRENGQRRVIVPNLNAWGRTANSTK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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